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The map label for this gene is trpS [H]

Identifier: 238024119

GI number: 238024119

Start: 819001

End: 820023

Strand: Reverse

Name: trpS [H]

Synonym: bglu_2g06930

Alternate gene names: 238024119

Gene position: 820023-819001 (Counterclockwise)

Preceding gene: 238024120

Following gene: 238024118

Centisome position: 29.0

GC content: 53.76

Gene sequence:

>1023_bases
ATGAAGGGAACACACGAAGGGAAGGTCATTCTTACGGGCGATCGGACTACTGGGCCGCTGCATCTAGGTCACTATGTTGG
CTCGCTCAAAACGCGAATTGCACTACAGGAATCGAACACTCAGTTTATTCTGCTGGCCGATCTGCAAGCGCTAACCGACA
ACGCGGAGCGCTATAAACGCGTGACGGATAACGTCATTGAGGTTGCGCTTGATTATCTGGCCGTGGGAATTGATCCGGAA
AAAAGCACGATTTTTGTCCAATCGCAAGTTCCGGAATTGACCGAAATCGCCAACCTGTTTCTCAATTTCGTGACGGTTTC
ACGGCTGGAACGCAATCCGACGATCAAGGAAGAAATCCGCCTGCGTGGGTTCGAACGTGATATTCCCGCGGGCTTCCTGA
CATACCCGGTCAGTCAGGCTGCTGACATCACGGCGTTCAAAGCGACGCTCGTACCTGTTGGTGACGACCAACTGCCGATG
ATCGAGCAAACGAACGAACTGGTTCGACGTATCAACGGACTGCTGGGGCCATTGGATCGACCGGTGCTGACGGAGTGTGA
AGCACTTATACCGAAAACTGGCAGACTCCCGGGCATCGACGGAAAAGCCAAAATGAGTAAGTCGCTAAACAATGCGCTCA
ACCTCGGCGCGTCGGCTGCAGACATCAAAACGGCCGTGAAGAAAATGTACACCGACCCGAACCATTTGAAAGTGAGCGAC
CCCGGAACGGTTGAGGGCAACGTCGTATTTGCTTATCTCGATGCCTTCGACCCGGATACGCAGGCGGTCGAAGAATTGAA
GGCTGCGTATCGCCGGGGCGGTTTGGGCGATGGCATCGTCAAAGAAAGGCTCGAAAACATTCTGCACGAACTGCTGGCGC
CTATTCGTGAGCGTCGCGAACACTATTCAAAAGACAAGGGCGAAGTACTTCGTACCCTGAAAGCCGGAACGGAAAAGGCG
CGGACTGTTGCGGGGGCAACGGTCGCAGAGTTGAAACGCGCCCTTGGGTTGGTCTATTTTTGA

Upstream 100 bases:

>100_bases
GAATTTTGGGCGATGCACGCAGCCAGCTTTTGAAGCTGTAGGATGAGAGGTCAGCCGACAGGCTGTAGTGGTTCACGATC
ACGCAAGGGCTACTCGCAAC

Downstream 100 bases:

>100_bases
TGCGTTGACGGCATGCGCTGTCGTTCTGCGCACCCCATGCCCGCCAGCAATGATGCTCTCGGGCAAGCCGTCTGGACTTA
TCGATTTCTGGTTGTCCAGT

Product: Tryptophanyl-tRNA synthetase

Products: NA

Alternate protein names: Tryptophan--tRNA ligase; TrpRS [H]

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MKGTHEGKVILTGDRTTGPLHLGHYVGSLKTRIALQESNTQFILLADLQALTDNAERYKRVTDNVIEVALDYLAVGIDPE
KSTIFVQSQVPELTEIANLFLNFVTVSRLERNPTIKEEIRLRGFERDIPAGFLTYPVSQAADITAFKATLVPVGDDQLPM
IEQTNELVRRINGLLGPLDRPVLTECEALIPKTGRLPGIDGKAKMSKSLNNALNLGASAADIKTAVKKMYTDPNHLKVSD
PGTVEGNVVFAYLDAFDPDTQAVEELKAAYRRGGLGDGIVKERLENILHELLAPIRERREHYSKDKGEVLRTLKAGTEKA
RTVAGATVAELKRALGLVYF

Sequences:

>Translated_340_residues
MKGTHEGKVILTGDRTTGPLHLGHYVGSLKTRIALQESNTQFILLADLQALTDNAERYKRVTDNVIEVALDYLAVGIDPE
KSTIFVQSQVPELTEIANLFLNFVTVSRLERNPTIKEEIRLRGFERDIPAGFLTYPVSQAADITAFKATLVPVGDDQLPM
IEQTNELVRRINGLLGPLDRPVLTECEALIPKTGRLPGIDGKAKMSKSLNNALNLGASAADIKTAVKKMYTDPNHLKVSD
PGTVEGNVVFAYLDAFDPDTQAVEELKAAYRRGGLGDGIVKERLENILHELLAPIRERREHYSKDKGEVLRTLKAGTEKA
RTVAGATVAELKRALGLVYF
>Mature_340_residues
MKGTHEGKVILTGDRTTGPLHLGHYVGSLKTRIALQESNTQFILLADLQALTDNAERYKRVTDNVIEVALDYLAVGIDPE
KSTIFVQSQVPELTEIANLFLNFVTVSRLERNPTIKEEIRLRGFERDIPAGFLTYPVSQAADITAFKATLVPVGDDQLPM
IEQTNELVRRINGLLGPLDRPVLTECEALIPKTGRLPGIDGKAKMSKSLNNALNLGASAADIKTAVKKMYTDPNHLKVSD
PGTVEGNVVFAYLDAFDPDTQAVEELKAAYRRGGLGDGIVKERLENILHELLAPIRERREHYSKDKGEVLRTLKAGTEKA
RTVAGATVAELKRALGLVYF

Specific function: Unknown

COG id: COG0180

COG function: function code J; Tryptophanyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Homo sapiens, GI7710154, Length=343, Percent_Identity=30.6122448979592, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI41352700, Length=183, Percent_Identity=33.879781420765, Blast_Score=100, Evalue=2e-21,
Organism=Escherichia coli, GI1789786, Length=343, Percent_Identity=30.0291545189504, Blast_Score=136, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI71982800, Length=350, Percent_Identity=29.1428571428571, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI71982793, Length=350, Percent_Identity=29.1428571428571, Blast_Score=113, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6320474, Length=369, Percent_Identity=24.9322493224932, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24666151, Length=337, Percent_Identity=33.5311572700297, Blast_Score=146, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001412
- InterPro:   IPR002305
- InterPro:   IPR014729
- InterPro:   IPR002306 [H]

Pfam domain/function: PF00579 tRNA-synt_1b [H]

EC number: =6.1.1.2 [H]

Molecular weight: Translated: 37382; Mature: 37382

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGTHEGKVILTGDRTTGPLHLGHYVGSLKTRIALQESNTQFILLADLQALTDNAERYKR
CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHEEEEEECCCCEEEEECHHHHHCCHHHHHH
VTDNVIEVALDYLAVGIDPEKSTIFVQSQVPELTEIANLFLNFVTVSRLERNPTIKEEIR
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LRGFERDIPAGFLTYPVSQAADITAFKATLVPVGDDQLPMIEQTNELVRRINGLLGPLDR
HCCCCCCCCCCHHHCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCC
PVLTECEALIPKTGRLPGIDGKAKMSKSLNNALNLGASAADIKTAVKKMYTDPNHLKVSD
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECC
PGTVEGNVVFAYLDAFDPDTQAVEELKAAYRRGGLGDGIVKERLENILHELLAPIRERRE
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HYSKDKGEVLRTLKAGTEKARTVAGATVAELKRALGLVYF
HHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKGTHEGKVILTGDRTTGPLHLGHYVGSLKTRIALQESNTQFILLADLQALTDNAERYKR
CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHEEEEEECCCCEEEEECHHHHHCCHHHHHH
VTDNVIEVALDYLAVGIDPEKSTIFVQSQVPELTEIANLFLNFVTVSRLERNPTIKEEIR
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LRGFERDIPAGFLTYPVSQAADITAFKATLVPVGDDQLPMIEQTNELVRRINGLLGPLDR
HCCCCCCCCCCHHHCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCC
PVLTECEALIPKTGRLPGIDGKAKMSKSLNNALNLGASAADIKTAVKKMYTDPNHLKVSD
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECC
PGTVEGNVVFAYLDAFDPDTQAVEELKAAYRRGGLGDGIVKERLENILHELLAPIRERRE
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HYSKDKGEVLRTLKAGTEKARTVAGATVAELKRALGLVYF
HHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA