| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024115
Identifier: 238024115
GI number: 238024115
Start: 814958
End: 816034
Strand: Reverse
Name: 238024115
Synonym: bglu_2g06880
Alternate gene names: NA
Gene position: 816034-814958 (Counterclockwise)
Preceding gene: 238024116
Following gene: 238024114
Centisome position: 28.86
GC content: 62.86
Gene sequence:
>1077_bases GTGGCGACCTACTTCAAGCACCTCAATTACACGCTCGGTGACGAGGATGCGGAAACGGAGATGAACATGCTGGCCGAAGG GGCCGAGCATGTTTTCGCGATCGCCGATTGCGGCAGCCGCATCGTTCCGCTTCTGGCCCGCGCGCCCCGGAAATTGACCT GCGTCGACATCAGCCCGGCACAGCTGGCCGTCACGCGCCTGCGCATTGCCTTGCTGCGCCAGGTGGAGCGGGACGAATAC TGCCGCTTCCTGGGCTACCTCGACGGCATGTCGCCCGAGACACGCCGGGCGCTGTTCGCCGGCCTGGAGCTGGAAGCGCG CCACCGCACCGTGCTGGAGGCGATGTTCGATCGCATCGCCTGGGGGCCCCTCGTGTACGAGGGGAAGTTCGAGCGGATGC TGATCACGCTGTCGAAAGTCACGCGCGCCGTACTCGGTCGAGCCTGCGATCGGCTGTTCGAACAGACTGACGTGAAAGCT CAGGCCGACTACTTCCGGAACGGCTTCCCGCGCTTCCGGTGGCGATGCGTACTGGCACTGCTCGGCAATTCCACCGCGCT GAACTCGTTGCTGTACAAGGGCGAATTTCCGGAGAAGAACCTGCCGGAAAGCTATCTGCGCATCTACACCGGCATCTTCG AGCGCCTTCTCACCCAGTTCCCGGCGCGATCGAGCTTCTTTCTTCAGCTGATCTTCCTCGGGCGCATACGCTTCGCGGAA GGGCTGCCGGTGGAATGCCGTCCCGACATCTATGCCAGCGCTCAGGCCAACTTGCGAGCGTGCGACGTGCAGTTCATCGA GGGTGACGTGTTGCAGGCCTTCGGCGCGACGGGGGGAGGAATCGACTATCTTTCGTTGTCCGATGTTCCCTCGTTTCTGG AAGACGATGCGGCACGGCGCTGCCTGCAGATCGCGCGGCCTCACATGCGCGCGGGCGGACTGGCCGTGATTCGAGGCCAT GTGCGGATCATACGGCCCACGCTGGAAGGCTTCCGTGACGAGTCGCAGCGTTTTACCGAAGCCGTGTCGCGTGAATCGAC CGGTCTATGGCAAATTCATGCCTTCAAGGCTGTCTAA
Upstream 100 bases:
>100_bases TGGACGAGGTCCATCGCGAATACATGAAGCTCGTGAGCGGCCAGCCGAGCCGTTACCGTGCCGTGTGTGACGCGCTGTTT CCGAACCGGTGAGCGCGGCT
Downstream 100 bases:
>100_bases CCACATCAGGAAATCAGCATGACCCATGATCGCCAAGCCGCGTATCCGACCGAGGAGCCGCATCGGGTGAAACGCATTGC CTATCGCGCTTCGTATGCCC
Product: putative transferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MATYFKHLNYTLGDEDAETEMNMLAEGAEHVFAIADCGSRIVPLLARAPRKLTCVDISPAQLAVTRLRIALLRQVERDEY CRFLGYLDGMSPETRRALFAGLELEARHRTVLEAMFDRIAWGPLVYEGKFERMLITLSKVTRAVLGRACDRLFEQTDVKA QADYFRNGFPRFRWRCVLALLGNSTALNSLLYKGEFPEKNLPESYLRIYTGIFERLLTQFPARSSFFLQLIFLGRIRFAE GLPVECRPDIYASAQANLRACDVQFIEGDVLQAFGATGGGIDYLSLSDVPSFLEDDAARRCLQIARPHMRAGGLAVIRGH VRIIRPTLEGFRDESQRFTEAVSRESTGLWQIHAFKAV
Sequences:
>Translated_358_residues MATYFKHLNYTLGDEDAETEMNMLAEGAEHVFAIADCGSRIVPLLARAPRKLTCVDISPAQLAVTRLRIALLRQVERDEY CRFLGYLDGMSPETRRALFAGLELEARHRTVLEAMFDRIAWGPLVYEGKFERMLITLSKVTRAVLGRACDRLFEQTDVKA QADYFRNGFPRFRWRCVLALLGNSTALNSLLYKGEFPEKNLPESYLRIYTGIFERLLTQFPARSSFFLQLIFLGRIRFAE GLPVECRPDIYASAQANLRACDVQFIEGDVLQAFGATGGGIDYLSLSDVPSFLEDDAARRCLQIARPHMRAGGLAVIRGH VRIIRPTLEGFRDESQRFTEAVSRESTGLWQIHAFKAV >Mature_357_residues ATYFKHLNYTLGDEDAETEMNMLAEGAEHVFAIADCGSRIVPLLARAPRKLTCVDISPAQLAVTRLRIALLRQVERDEYC RFLGYLDGMSPETRRALFAGLELEARHRTVLEAMFDRIAWGPLVYEGKFERMLITLSKVTRAVLGRACDRLFEQTDVKAQ ADYFRNGFPRFRWRCVLALLGNSTALNSLLYKGEFPEKNLPESYLRIYTGIFERLLTQFPARSSFFLQLIFLGRIRFAEG LPVECRPDIYASAQANLRACDVQFIEGDVLQAFGATGGGIDYLSLSDVPSFLEDDAARRCLQIARPHMRAGGLAVIRGHV RIIRPTLEGFRDESQRFTEAVSRESTGLWQIHAFKAV
Specific function: Unknown
COG id: COG5379
COG function: function code I; S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40547; Mature: 40416
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATYFKHLNYTLGDEDAETEMNMLAEGAEHVFAIADCGSRIVPLLARAPRKLTCVDISPA CCCHHHHCCCCCCCCCHHHHHHHHHHCHHHEEEHHHCCCHHHHHHHCCCCEEEEEECCHH QLAVTRLRIALLRQVERDEYCRFLGYLDGMSPETRRALFAGLELEARHRTVLEAMFDRIA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH WGPLVYEGKFERMLITLSKVTRAVLGRACDRLFEQTDVKAQADYFRNGFPRFRWRCVLAL CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH LGNSTALNSLLYKGEFPEKNLPESYLRIYTGIFERLLTQFPARSSFFLQLIFLGRIRFAE HCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC GLPVECRPDIYASAQANLRACDVQFIEGDVLQAFGATGGGIDYLSLSDVPSFLEDDAARR CCCCCCCCCCEECCCCCCEEEEEEEHHHHHHHHHCCCCCCCCEEEHHCCHHHHHHHHHHH CLQIARPHMRAGGLAVIRGHVRIIRPTLEGFRDESQRFTEAVSRESTGLWQIHAFKAV HHHHHCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC >Mature Secondary Structure ATYFKHLNYTLGDEDAETEMNMLAEGAEHVFAIADCGSRIVPLLARAPRKLTCVDISPA CCHHHHCCCCCCCCCHHHHHHHHHHCHHHEEEHHHCCCHHHHHHHCCCCEEEEEECCHH QLAVTRLRIALLRQVERDEYCRFLGYLDGMSPETRRALFAGLELEARHRTVLEAMFDRIA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH WGPLVYEGKFERMLITLSKVTRAVLGRACDRLFEQTDVKAQADYFRNGFPRFRWRCVLAL CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH LGNSTALNSLLYKGEFPEKNLPESYLRIYTGIFERLLTQFPARSSFFLQLIFLGRIRFAE HCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC GLPVECRPDIYASAQANLRACDVQFIEGDVLQAFGATGGGIDYLSLSDVPSFLEDDAARR CCCCCCCCCCEECCCCCCEEEEEEEHHHHHHHHHCCCCCCCCEEEHHCCHHHHHHHHHHH CLQIARPHMRAGGLAVIRGHVRIIRPTLEGFRDESQRFTEAVSRESTGLWQIHAFKAV HHHHHCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA