Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is dltE [H]

Identifier: 238024111

GI number: 238024111

Start: 810086

End: 810865

Strand: Direct

Name: dltE [H]

Synonym: bglu_2g06820

Alternate gene names: 238024111

Gene position: 810086-810865 (Clockwise)

Preceding gene: 238024109

Following gene: 238024112

Centisome position: 28.65

GC content: 63.59

Gene sequence:

>780_bases
ATGGCCACCCCGATCGATTTCACGCGTGCGCAGGTACTGATAACTGGCGGCGGCCAGGGCATCGGCCTGGCGCTTGCGAA
GCGCTTCCTTGCGGTAGGCAGCCGCGTGCTCGTCACCGGCCGTCACGAGTCGAAGCTTGAGCAGGCAAGACGGGCTCATC
GTGGCCTGGAGATCTTCGTCAACAACATCAGCAGTGCTGCTGGGCGCATCGAGTTGGCGACGCATGTGGCCGAGGCGATG
CCGGGGCTCAACGTGCTTATCAACAACGCGGGCTACCAGCGAAGGGTCTCGCTAGCTGCCGACGACGCTCCGTGGAGTGA
CTCGCAAGCCGAGATCGATACGCTGCTCTCCGGGCCTATCCACCTCACTCGGTTGCTGGTTCCGCTGCTGCTCGCGCACG
GCGGCGCCGGCATGATCGTCAACGTCACATCAGGTGGTGCGTACTTTCCTCAACCCTTCGCTCCGGTCTACAGCGCCTGC
AAGGCGGCGCTGCACAGCTTCACGGTCAATTTGCGATTCGCGATGTCGAAAACGGCCTATCGCGTCGTCGAACTGATTCC
GCCTGCGGTGCAGACAGGCCTCGGCGGTACTGATGCTGGTCATGGGGCTCCGCTCGACGAATTTGCCGACTCGGTGTTCA
AGCAGCTGAGCGTCGGCGAGCGCGACGAGATCGGCTTTGGCCCCACCGCGAGTCCTCGCTTCGAGCAGGCGGCGGCGCCG
TATCGCGAAATGTTCCAGGAGTTCCGGACCCGCACGCCGGTTAAGCTCTACGGTGACTGA

Upstream 100 bases:

>100_bases
GCTCATCCGTAGCTTCGCACGTTCGAACAACGCCCCTTTTGGTTGATGAATCAACTTCAAGAGAGTAGAGTAGTTGATAT
ATCAACCGATGGAGCATGGC

Downstream 100 bases:

>100_bases
CGCGTCGAATTCGATCATAGTTGACGCGTCGAAGCAAAGGAGCGACGCCTCACTATGAACAAGAATCGGCTTTCGGCTAG
GGAGCAAGCGCTATGGCATG

Product: D-alanyl-lipoteichoic acid biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MATPIDFTRAQVLITGGGQGIGLALAKRFLAVGSRVLVTGRHESKLEQARRAHRGLEIFVNNISSAAGRIELATHVAEAM
PGLNVLINNAGYQRRVSLAADDAPWSDSQAEIDTLLSGPIHLTRLLVPLLLAHGGAGMIVNVTSGGAYFPQPFAPVYSAC
KAALHSFTVNLRFAMSKTAYRVVELIPPAVQTGLGGTDAGHGAPLDEFADSVFKQLSVGERDEIGFGPTASPRFEQAAAP
YREMFQEFRTRTPVKLYGD

Sequences:

>Translated_259_residues
MATPIDFTRAQVLITGGGQGIGLALAKRFLAVGSRVLVTGRHESKLEQARRAHRGLEIFVNNISSAAGRIELATHVAEAM
PGLNVLINNAGYQRRVSLAADDAPWSDSQAEIDTLLSGPIHLTRLLVPLLLAHGGAGMIVNVTSGGAYFPQPFAPVYSAC
KAALHSFTVNLRFAMSKTAYRVVELIPPAVQTGLGGTDAGHGAPLDEFADSVFKQLSVGERDEIGFGPTASPRFEQAAAP
YREMFQEFRTRTPVKLYGD
>Mature_258_residues
ATPIDFTRAQVLITGGGQGIGLALAKRFLAVGSRVLVTGRHESKLEQARRAHRGLEIFVNNISSAAGRIELATHVAEAMP
GLNVLINNAGYQRRVSLAADDAPWSDSQAEIDTLLSGPIHLTRLLVPLLLAHGGAGMIVNVTSGGAYFPQPFAPVYSACK
AALHSFTVNLRFAMSKTAYRVVELIPPAVQTGLGGTDAGHGAPLDEFADSVFKQLSVGERDEIGFGPTASPRFEQAAAPY
REMFQEFRTRTPVKLYGD

Specific function: Unknown

COG id: COG3967

COG function: function code M; Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Escherichia coli, GI1787820, Length=204, Percent_Identity=29.4117647058824, Blast_Score=79, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17559104, Length=202, Percent_Identity=29.7029702970297, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17560150, Length=199, Percent_Identity=28.643216080402, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17551412, Length=213, Percent_Identity=28.169014084507, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17538486, Length=216, Percent_Identity=29.1666666666667, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17565030, Length=222, Percent_Identity=30.1801801801802, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=198, Percent_Identity=26.2626262626263, Blast_Score=62, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24580925, Length=182, Percent_Identity=31.3186813186813, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI23397609, Length=192, Percent_Identity=30.2083333333333, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27669; Mature: 27538

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPIDFTRAQVLITGGGQGIGLALAKRFLAVGSRVLVTGRHESKLEQARRAHRGLEIFV
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCHHHHH
NNISSAAGRIELATHVAEAMPGLNVLINNAGYQRRVSLAADDAPWSDSQAEIDTLLSGPI
HHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHCCHH
HLTRLLVPLLLAHGGAGMIVNVTSGGAYFPQPFAPVYSACKAALHSFTVNLRFAMSKTAY
HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHEEEEEHHHHHHH
RVVELIPPAVQTGLGGTDAGHGAPLDEFADSVFKQLSVGERDEIGFGPTASPRFEQAAAP
HHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCH
YREMFQEFRTRTPVKLYGD
HHHHHHHHHHCCCEEECCC
>Mature Secondary Structure 
ATPIDFTRAQVLITGGGQGIGLALAKRFLAVGSRVLVTGRHESKLEQARRAHRGLEIFV
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCHHHHH
NNISSAAGRIELATHVAEAMPGLNVLINNAGYQRRVSLAADDAPWSDSQAEIDTLLSGPI
HHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHCCHH
HLTRLLVPLLLAHGGAGMIVNVTSGGAYFPQPFAPVYSACKAALHSFTVNLRFAMSKTAY
HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHEEEEEHHHHHHH
RVVELIPPAVQTGLGGTDAGHGAPLDEFADSVFKQLSVGERDEIGFGPTASPRFEQAAAP
HHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCH
YREMFQEFRTRTPVKLYGD
HHHHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377; 7797557 [H]