| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yojK [H]
Identifier: 238024107
GI number: 238024107
Start: 805432
End: 806646
Strand: Direct
Name: yojK [H]
Synonym: bglu_2g06760
Alternate gene names: 238024107
Gene position: 805432-806646 (Clockwise)
Preceding gene: 238024106
Following gene: 238024109
Centisome position: 28.49
GC content: 71.93
Gene sequence:
>1215_bases ATGAAACGGATCCTGTTCTGCGTGGTGCCCGAGAAGGGCCATCTCAACCCCTGCATCGGCCCCGCACAGCATCTGCGCCG CGCCGGCCACGAGGTGGCGTTCTACGCGCCGGCCGACATCGGCGCGCAGCTCGACGCGGCCGGCGGCTTCGCCTTTCTCG GCCCGCGCGAGACGCCCGAGCGACACGACCTGTCGCGCGGCGCGAGCTTCGCCGCGAGCATTCGCGACGCCGACTGGCTG CGCAACTGGATCCGCACGCTGTTGATCGACCACGCGCCCGCACTGGTCGATGCGATCCGGCCGGTGCTGCGCGACTGGCG TCCCGACGTGGTGGTGATCGACCCGCTGCTGTACGCGGCCGCGATCGCGGCCGAGCTCGAAGGGCTGCCGTGGGTGTCGA TGTCGAACTCGCTGAACCCGGTGCTGCCCGAGGCGCTCGAGGTGCTCGATTCGGCGCTGCTGCGGACCGTGCGCTGGCTC GCGCCCGAGCGCGAGGCGCTGTTCGCGCGCTACGGGCTGACGGCGCGCTTTCGCGGCTGCGACGTGCTCTCGCCGCATCT GACGCTGGCCTTCACGACCGAGGCGCTGGTGGGCGCTCCGCCGCCCGGTGTCGAGCTGGTCGGGCCGGCCATGCCCGCCG GCGCACGCGGCGACGAGGCCCAATTTCCGTGGGAGCGGCTCGATGCCGGGCGGCCGCTCGTCTACATGTCGCTCGGTAGC CAGCTGTACTACCACCCCGAGCTGTTCCTGAAGGTGATCGAGGCGACGCGCGAGAGCGGTGCGCAACTGGTGCTGTCGGT GGGCGAGCTCGTCGATGCCGGGCTGCTGCCGACCGACGACCCGCGCGTGGTGATCGTGCGCTACGCCCCGCAACTGGCCT TGCTGGAACGCACGCAGGCCTTCATCAGCCACGGCGGCGCGAATTCGGTGATGGAGGCGCTGGCGAGCGGCGTGCCGATG CTGCTGTCGCCGTTCTGCAACGACCAGTTCCATTCCGCGCACTTCGTGGTGCGGGCCGGCGCGGGGCTGCAGCTCGATCT GGAGGCGGCCGATGTGGCGCAGCTCGGCGACGCGATCGCCCGGTTGTTGCGGCCTGGCCCGTTGCGCGAGGGCGCCGCGC GGATCCGCGAGAGCTATGCGCGCGACGGCTCGGCCGAGGCGGCGCAGCGGATCAGCGCACTCGCCGCAGGAAGCCGCCGG GCGACAGCGTCATGA
Upstream 100 bases:
>100_bases ATGCCGAGCGCGTGCTGTGGGCCACGCTCGGCCTGATTCTCGATCACTTCGATGCCGCGCCCGACCTCGCGCATCGCTCC TGACCCACGAGTCTTTCCCA
Downstream 100 bases:
>100_bases GCACGCGGTCTTCGATGTCGAGGTCGGCCTCGAAACGGTGGTCGGCGGCGAGGAAGGCGCGCACGGCCGTGGCCGGGTTG TTGCCGCGGCCGTAGGGCTT
Product: glycosyltransferase, MGT family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MKRILFCVVPEKGHLNPCIGPAQHLRRAGHEVAFYAPADIGAQLDAAGGFAFLGPRETPERHDLSRGASFAASIRDADWL RNWIRTLLIDHAPALVDAIRPVLRDWRPDVVVIDPLLYAAAIAAELEGLPWVSMSNSLNPVLPEALEVLDSALLRTVRWL APEREALFARYGLTARFRGCDVLSPHLTLAFTTEALVGAPPPGVELVGPAMPAGARGDEAQFPWERLDAGRPLVYMSLGS QLYYHPELFLKVIEATRESGAQLVLSVGELVDAGLLPTDDPRVVIVRYAPQLALLERTQAFISHGGANSVMEALASGVPM LLSPFCNDQFHSAHFVVRAGAGLQLDLEAADVAQLGDAIARLLRPGPLREGAARIRESYARDGSAEAAQRISALAAGSRR ATAS
Sequences:
>Translated_404_residues MKRILFCVVPEKGHLNPCIGPAQHLRRAGHEVAFYAPADIGAQLDAAGGFAFLGPRETPERHDLSRGASFAASIRDADWL RNWIRTLLIDHAPALVDAIRPVLRDWRPDVVVIDPLLYAAAIAAELEGLPWVSMSNSLNPVLPEALEVLDSALLRTVRWL APEREALFARYGLTARFRGCDVLSPHLTLAFTTEALVGAPPPGVELVGPAMPAGARGDEAQFPWERLDAGRPLVYMSLGS QLYYHPELFLKVIEATRESGAQLVLSVGELVDAGLLPTDDPRVVIVRYAPQLALLERTQAFISHGGANSVMEALASGVPM LLSPFCNDQFHSAHFVVRAGAGLQLDLEAADVAQLGDAIARLLRPGPLREGAARIRESYARDGSAEAAQRISALAAGSRR ATAS >Mature_404_residues MKRILFCVVPEKGHLNPCIGPAQHLRRAGHEVAFYAPADIGAQLDAAGGFAFLGPRETPERHDLSRGASFAASIRDADWL RNWIRTLLIDHAPALVDAIRPVLRDWRPDVVVIDPLLYAAAIAAELEGLPWVSMSNSLNPVLPEALEVLDSALLRTVRWL APEREALFARYGLTARFRGCDVLSPHLTLAFTTEALVGAPPPGVELVGPAMPAGARGDEAQFPWERLDAGRPLVYMSLGS QLYYHPELFLKVIEATRESGAQLVLSVGELVDAGLLPTDDPRVVIVRYAPQLALLERTQAFISHGGANSVMEALASGVPM LLSPFCNDQFHSAHFVVRAGAGLQLDLEAADVAQLGDAIARLLRPGPLREGAARIRESYARDGSAEAAQRISALAAGSRR ATAS
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glycosyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002213 - InterPro: IPR006326 [H]
Pfam domain/function: PF00201 UDPGT [H]
EC number: NA
Molecular weight: Translated: 43519; Mature: 43519
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILFCVVPEKGHLNPCIGPAQHLRRAGHEVAFYAPADIGAQLDAAGGFAFLGPRETPE CCEEEEEEECCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCEECCCCEEECCCCCCCC RHDLSRGASFAASIRDADWLRNWIRTLLIDHAPALVDAIRPVLRDWRPDVVVIDPLLYAA HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECHHHHHH AIAAELEGLPWVSMSNSLNPVLPEALEVLDSALLRTVRWLAPEREALFARYGLTARFRGC HHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEECCC DVLSPHLTLAFTTEALVGAPPPGVELVGPAMPAGARGDEAQFPWERLDAGRPLVYMSLGS CCCCCCEEEEEEHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCC QLYYHPELFLKVIEATRESGAQLVLSVGELVDAGLLPTDDPRVVIVRYAPQLALLERTQA CEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHH FISHGGANSVMEALASGVPMLLSPFCNDQFHSAHFVVRAGAGLQLDLEAADVAQLGDAIA HHHCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEEECCCCEEECCHHHHHHHHHHHH RLLRPGPLREGAARIRESYARDGSAEAAQRISALAAGSRRATAS HHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKRILFCVVPEKGHLNPCIGPAQHLRRAGHEVAFYAPADIGAQLDAAGGFAFLGPRETPE CCEEEEEEECCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCEECCCCEEECCCCCCCC RHDLSRGASFAASIRDADWLRNWIRTLLIDHAPALVDAIRPVLRDWRPDVVVIDPLLYAA HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECHHHHHH AIAAELEGLPWVSMSNSLNPVLPEALEVLDSALLRTVRWLAPEREALFARYGLTARFRGC HHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEECCC DVLSPHLTLAFTTEALVGAPPPGVELVGPAMPAGARGDEAQFPWERLDAGRPLVYMSLGS CCCCCCEEEEEEHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCC QLYYHPELFLKVIEATRESGAQLVLSVGELVDAGLLPTDDPRVVIVRYAPQLALLERTQA CEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHH FISHGGANSVMEALASGVPMLLSPFCNDQFHSAHFVVRAGAGLQLDLEAADVAQLGDAIA HHHCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEEECCCCEEECCHHHHHHHHHHHH RLLRPGPLREGAARIRESYARDGSAEAAQRISALAAGSRRATAS HHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]