| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is mmgC [H]
Identifier: 238024065
GI number: 238024065
Start: 750907
End: 752046
Strand: Direct
Name: mmgC [H]
Synonym: bglu_2g06260
Alternate gene names: 238024065
Gene position: 750907-752046 (Clockwise)
Preceding gene: 238024063
Following gene: 238024066
Centisome position: 26.56
GC content: 69.39
Gene sequence:
>1140_bases ATGGATGCGCTCTATACCGAAGACCAGCGGATGATTCGCGATACGGTCCGGGATTTTTCCACCGAAGTGCTGGCGCCGAA CGCGGCGCAATGGGACCAGGACGGCGCGCTGCCCGACGGCGTGGTCGCGCAGCTCGGCGAACTCGGCCTGCTCGGCATGG TGGTGCCCGCCGAATGGGAAGGCTCCTATACCGACTACACCGCCTATGCGCTCGCGGTGGAGGAGATCGCGGCCGGCTGC GCCTCCTGCTCGACGCTGATGAGCGTGCAGAACTCGGTCTGCTGCGGTCCGATCCTTTCCTACGGTACCGACGCGCAGCG CGACCGCTGGCTGCGCGGGCTGGCCTCGGGCCGCATGATCGGCTCGTTCTGCCTGACCGAGCCGCAGGCCGGCTCGGAGG CCAACAACCTGCGCACGCGCGCGGTGCTCAAGGACGGCCGCTGGGTGCTCGACGGCAGCAAGCAGTTCATCTCGAACGCG TCGCGCGCCGCGGTGGCGATCGTTTTTGCCATGACCGATCCCGAGCTGGGCAAGCGCGGCCTGTCGGCCTTCATCGTGCC CACCGACACGCCGGGCTTCCAGGTCGGCAAGCCCGAGAAGAAGCTCGGCATCCGCGCCTCGGACACCTGCCCGATCACGC TCGAGCACTGCGAGATTCCCGAGGAGAACCTGCTCGGCGCGCGCGGCGAGGGCCTCAAGATCGCGCTGTCGAACCTCGAG GGCGGGCGCATCGGCATCGCCGCCCAGGCGGTGGGCATCGCGCGCGCGGCGTTCGACAAGGCGCGCCGCTACGCGGCCGA GCGCACCCAGTTCGGCAAGCCGATCGCCGAGCATCAGGCGATCGCCGAGAAGCTCGCCGACATGGCCACCCAGCTGAACG CGGCGCGCCTGCTCGTGCATCACGCCGCGCGGCTGCGCACGGCGGGCCTGCCGTGCCTGTCGGAAGCCTCGCAGGCCAAG CTGTTCGCCTCCGAGATGTCGGAGGCCGTGTGCAGCGCCGCGATCCAGATCCACGGCGGCTATGGCTATCTGGCCGACTA CGAGGTGGAGCGCCATTACCGCGACGCGCGCATCACGCAGATCTACGAGGGCACGAGCGAAGTGCAGCGCATGGTGATCG CGCGGCAGCTGCTGGCCTGA
Upstream 100 bases:
>100_bases CACTGAGGGCATCGCTGCACCGCGCACCCGCGCCATCAACGATCAGGCCGCGTCGTCCCACGACGGCGGCGCCCGGCCGC CGACAGGAGACTCGCCCGCC
Downstream 100 bases:
>100_bases CGCGCCGTGCGCATTCCCACGGCGGTATGATCACCCTCACACGACGCACGATCACACGCTGCGCGAGACGGAAGGAGACG AGACGATGACGGCGCAGGCT
Product: acyl-CoA dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MDALYTEDQRMIRDTVRDFSTEVLAPNAAQWDQDGALPDGVVAQLGELGLLGMVVPAEWEGSYTDYTAYALAVEEIAAGC ASCSTLMSVQNSVCCGPILSYGTDAQRDRWLRGLASGRMIGSFCLTEPQAGSEANNLRTRAVLKDGRWVLDGSKQFISNA SRAAVAIVFAMTDPELGKRGLSAFIVPTDTPGFQVGKPEKKLGIRASDTCPITLEHCEIPEENLLGARGEGLKIALSNLE GGRIGIAAQAVGIARAAFDKARRYAAERTQFGKPIAEHQAIAEKLADMATQLNAARLLVHHAARLRTAGLPCLSEASQAK LFASEMSEAVCSAAIQIHGGYGYLADYEVERHYRDARITQIYEGTSEVQRMVIARQLLA
Sequences:
>Translated_379_residues MDALYTEDQRMIRDTVRDFSTEVLAPNAAQWDQDGALPDGVVAQLGELGLLGMVVPAEWEGSYTDYTAYALAVEEIAAGC ASCSTLMSVQNSVCCGPILSYGTDAQRDRWLRGLASGRMIGSFCLTEPQAGSEANNLRTRAVLKDGRWVLDGSKQFISNA SRAAVAIVFAMTDPELGKRGLSAFIVPTDTPGFQVGKPEKKLGIRASDTCPITLEHCEIPEENLLGARGEGLKIALSNLE GGRIGIAAQAVGIARAAFDKARRYAAERTQFGKPIAEHQAIAEKLADMATQLNAARLLVHHAARLRTAGLPCLSEASQAK LFASEMSEAVCSAAIQIHGGYGYLADYEVERHYRDARITQIYEGTSEVQRMVIARQLLA >Mature_379_residues MDALYTEDQRMIRDTVRDFSTEVLAPNAAQWDQDGALPDGVVAQLGELGLLGMVVPAEWEGSYTDYTAYALAVEEIAAGC ASCSTLMSVQNSVCCGPILSYGTDAQRDRWLRGLASGRMIGSFCLTEPQAGSEANNLRTRAVLKDGRWVLDGSKQFISNA SRAAVAIVFAMTDPELGKRGLSAFIVPTDTPGFQVGKPEKKLGIRASDTCPITLEHCEIPEENLLGARGEGLKIALSNLE GGRIGIAAQAVGIARAAFDKARRYAAERTQFGKPIAEHQAIAEKLADMATQLNAARLLVHHAARLRTAGLPCLSEASQAK LFASEMSEAVCSAAIQIHGGYGYLADYEVERHYRDARITQIYEGTSEVQRMVIARQLLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyl-CoA dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4557233, Length=372, Percent_Identity=50.2688172043011, Blast_Score=355, Evalue=5e-98, Organism=Homo sapiens, GI4501859, Length=373, Percent_Identity=42.0911528150134, Blast_Score=313, Evalue=1e-85, Organism=Homo sapiens, GI7656849, Length=374, Percent_Identity=38.5026737967914, Blast_Score=263, Evalue=2e-70, Organism=Homo sapiens, GI4557231, Length=375, Percent_Identity=36.8, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI187960098, Length=375, Percent_Identity=36.8, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI21361497, Length=367, Percent_Identity=38.1471389645777, Blast_Score=233, Evalue=2e-61, Organism=Homo sapiens, GI226958412, Length=374, Percent_Identity=34.4919786096257, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI226958414, Length=334, Percent_Identity=35.0299401197605, Blast_Score=217, Evalue=1e-56, Organism=Homo sapiens, GI4501857, Length=378, Percent_Identity=31.4814814814815, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI4557235, Length=340, Percent_Identity=38.5294117647059, Blast_Score=208, Evalue=5e-54, Organism=Homo sapiens, GI76496475, Length=340, Percent_Identity=38.5294117647059, Blast_Score=208, Evalue=5e-54, Organism=Homo sapiens, GI4503943, Length=381, Percent_Identity=29.3963254593176, Blast_Score=167, Evalue=1e-41, Organism=Homo sapiens, GI7669494, Length=367, Percent_Identity=29.700272479564, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI211971008, Length=376, Percent_Identity=28.9893617021277, Blast_Score=132, Evalue=7e-31, Organism=Homo sapiens, GI48976061, Length=376, Percent_Identity=28.9893617021277, Blast_Score=131, Evalue=8e-31, Organism=Homo sapiens, GI38505218, Length=357, Percent_Identity=28.2913165266106, Blast_Score=110, Evalue=3e-24, Organism=Escherichia coli, GI87081958, Length=381, Percent_Identity=31.758530183727, Blast_Score=175, Evalue=4e-45, Organism=Escherichia coli, GI1786223, Length=379, Percent_Identity=28.4960422163588, Blast_Score=167, Evalue=1e-42, Organism=Escherichia coli, GI87081702, Length=367, Percent_Identity=27.2479564032698, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI87082384, Length=280, Percent_Identity=29.6428571428571, Blast_Score=89, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17569725, Length=376, Percent_Identity=39.3617021276596, Blast_Score=267, Evalue=6e-72, Organism=Caenorhabditis elegans, GI17534899, Length=377, Percent_Identity=39.2572944297082, Blast_Score=264, Evalue=6e-71, Organism=Caenorhabditis elegans, GI17506239, Length=372, Percent_Identity=36.8279569892473, Blast_Score=261, Evalue=3e-70, Organism=Caenorhabditis elegans, GI17508101, Length=370, Percent_Identity=36.4864864864865, Blast_Score=258, Evalue=4e-69, Organism=Caenorhabditis elegans, GI17538396, Length=374, Percent_Identity=35.0267379679144, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI17570075, Length=382, Percent_Identity=36.9109947643979, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI17533517, Length=373, Percent_Identity=35.3887399463807, Blast_Score=231, Evalue=4e-61, Organism=Caenorhabditis elegans, GI71985184, Length=355, Percent_Identity=38.5915492957746, Blast_Score=227, Evalue=8e-60, Organism=Caenorhabditis elegans, GI71990804, Length=293, Percent_Identity=38.2252559726962, Blast_Score=213, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17534353, Length=375, Percent_Identity=32, Blast_Score=185, Evalue=3e-47, Organism=Caenorhabditis elegans, GI71985192, Length=280, Percent_Identity=38.5714285714286, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17551932, Length=375, Percent_Identity=28.5333333333333, Blast_Score=165, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17505929, Length=375, Percent_Identity=29.0666666666667, Blast_Score=163, Evalue=1e-40, Organism=Caenorhabditis elegans, GI32563615, Length=233, Percent_Identity=36.0515021459227, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI71982178, Length=267, Percent_Identity=31.0861423220974, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17531909, Length=233, Percent_Identity=35.1931330472103, Blast_Score=134, Evalue=6e-32, Organism=Caenorhabditis elegans, GI17562446, Length=290, Percent_Identity=28.6206896551724, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17531913, Length=174, Percent_Identity=32.183908045977, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI86563383, Length=278, Percent_Identity=29.8561151079137, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI86563381, Length=278, Percent_Identity=29.8561151079137, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI21356377, Length=373, Percent_Identity=48.5254691689008, Blast_Score=360, Evalue=1e-100, Organism=Drosophila melanogaster, GI24646207, Length=376, Percent_Identity=43.6170212765958, Blast_Score=307, Evalue=8e-84, Organism=Drosophila melanogaster, GI24666513, Length=370, Percent_Identity=39.1891891891892, Blast_Score=278, Evalue=5e-75, Organism=Drosophila melanogaster, GI24660351, Length=375, Percent_Identity=38.1333333333333, Blast_Score=256, Evalue=1e-68, Organism=Drosophila melanogaster, GI281363737, Length=384, Percent_Identity=35.9375, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI21355753, Length=384, Percent_Identity=34.1145833333333, Blast_Score=212, Evalue=4e-55, Organism=Drosophila melanogaster, GI19920834, Length=381, Percent_Identity=30.1837270341207, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI221473076, Length=216, Percent_Identity=27.7777777777778, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI45550141, Length=216, Percent_Identity=27.7777777777778, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24652780, Length=235, Percent_Identity=24.2553191489362, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006089 - InterPro: IPR006092 - InterPro: IPR006090 - InterPro: IPR006091 - InterPro: IPR009075 - InterPro: IPR013786 - InterPro: IPR009100 [H]
Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]
EC number: NA
Molecular weight: Translated: 40828; Mature: 40828
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS00073 ACYL_COA_DH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDALYTEDQRMIRDTVRDFSTEVLAPNAAQWDQDGALPDGVVAQLGELGLLGMVVPAEWE CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCC GSYTDYTAYALAVEEIAAGCASCSTLMSVQNSVCCGPILSYGTDAQRDRWLRGLASGRMI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHCCCCH GSFCLTEPQAGSEANNLRTRAVLKDGRWVLDGSKQFISNASRAAVAIVFAMTDPELGKRG HHHHCCCCCCCCCHHHHHHHHEEECCCEEECCCHHHHCCCCCEEEEEEEEECCHHHCCCC LSAFIVPTDTPGFQVGKPEKKLGIRASDTCPITLEHCEIPEENLLGARGEGLKIALSNLE CEEEEEECCCCCCCCCCCHHHHCCCCCCCCCEEECCCCCCHHHCCCCCCCCEEEEEECCC GGRIGIAAQAVGIARAAFDKARRYAAERTQFGKPIAEHQAIAEKLADMATQLNAARLLVH CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HAARLRTAGLPCLSEASQAKLFASEMSEAVCSAAIQIHGGYGYLADYEVERHYRDARITQ HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEECCHHHHHHHHHHHHH IYEGTSEVQRMVIARQLLA HHCCHHHHHHHHHHHHHHC >Mature Secondary Structure MDALYTEDQRMIRDTVRDFSTEVLAPNAAQWDQDGALPDGVVAQLGELGLLGMVVPAEWE CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCC GSYTDYTAYALAVEEIAAGCASCSTLMSVQNSVCCGPILSYGTDAQRDRWLRGLASGRMI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHCCCCH GSFCLTEPQAGSEANNLRTRAVLKDGRWVLDGSKQFISNASRAAVAIVFAMTDPELGKRG HHHHCCCCCCCCCHHHHHHHHEEECCCEEECCCHHHHCCCCCEEEEEEEEECCHHHCCCC LSAFIVPTDTPGFQVGKPEKKLGIRASDTCPITLEHCEIPEENLLGARGEGLKIALSNLE CEEEEEECCCCCCCCCCCHHHHCCCCCCCCCEEECCCCCCHHHCCCCCCCCEEEEEECCC GGRIGIAAQAVGIARAAFDKARRYAAERTQFGKPIAEHQAIAEKLADMATQLNAARLLVH CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HAARLRTAGLPCLSEASQAKLFASEMSEAVCSAAIQIHGGYGYLADYEVERHYRDARITQ HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEECCHHHHHHHHHHHHH IYEGTSEVQRMVIARQLLA HHCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8759838; 8969508; 9384377 [H]