Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is mmgC [H]

Identifier: 238024065

GI number: 238024065

Start: 750907

End: 752046

Strand: Direct

Name: mmgC [H]

Synonym: bglu_2g06260

Alternate gene names: 238024065

Gene position: 750907-752046 (Clockwise)

Preceding gene: 238024063

Following gene: 238024066

Centisome position: 26.56

GC content: 69.39

Gene sequence:

>1140_bases
ATGGATGCGCTCTATACCGAAGACCAGCGGATGATTCGCGATACGGTCCGGGATTTTTCCACCGAAGTGCTGGCGCCGAA
CGCGGCGCAATGGGACCAGGACGGCGCGCTGCCCGACGGCGTGGTCGCGCAGCTCGGCGAACTCGGCCTGCTCGGCATGG
TGGTGCCCGCCGAATGGGAAGGCTCCTATACCGACTACACCGCCTATGCGCTCGCGGTGGAGGAGATCGCGGCCGGCTGC
GCCTCCTGCTCGACGCTGATGAGCGTGCAGAACTCGGTCTGCTGCGGTCCGATCCTTTCCTACGGTACCGACGCGCAGCG
CGACCGCTGGCTGCGCGGGCTGGCCTCGGGCCGCATGATCGGCTCGTTCTGCCTGACCGAGCCGCAGGCCGGCTCGGAGG
CCAACAACCTGCGCACGCGCGCGGTGCTCAAGGACGGCCGCTGGGTGCTCGACGGCAGCAAGCAGTTCATCTCGAACGCG
TCGCGCGCCGCGGTGGCGATCGTTTTTGCCATGACCGATCCCGAGCTGGGCAAGCGCGGCCTGTCGGCCTTCATCGTGCC
CACCGACACGCCGGGCTTCCAGGTCGGCAAGCCCGAGAAGAAGCTCGGCATCCGCGCCTCGGACACCTGCCCGATCACGC
TCGAGCACTGCGAGATTCCCGAGGAGAACCTGCTCGGCGCGCGCGGCGAGGGCCTCAAGATCGCGCTGTCGAACCTCGAG
GGCGGGCGCATCGGCATCGCCGCCCAGGCGGTGGGCATCGCGCGCGCGGCGTTCGACAAGGCGCGCCGCTACGCGGCCGA
GCGCACCCAGTTCGGCAAGCCGATCGCCGAGCATCAGGCGATCGCCGAGAAGCTCGCCGACATGGCCACCCAGCTGAACG
CGGCGCGCCTGCTCGTGCATCACGCCGCGCGGCTGCGCACGGCGGGCCTGCCGTGCCTGTCGGAAGCCTCGCAGGCCAAG
CTGTTCGCCTCCGAGATGTCGGAGGCCGTGTGCAGCGCCGCGATCCAGATCCACGGCGGCTATGGCTATCTGGCCGACTA
CGAGGTGGAGCGCCATTACCGCGACGCGCGCATCACGCAGATCTACGAGGGCACGAGCGAAGTGCAGCGCATGGTGATCG
CGCGGCAGCTGCTGGCCTGA

Upstream 100 bases:

>100_bases
CACTGAGGGCATCGCTGCACCGCGCACCCGCGCCATCAACGATCAGGCCGCGTCGTCCCACGACGGCGGCGCCCGGCCGC
CGACAGGAGACTCGCCCGCC

Downstream 100 bases:

>100_bases
CGCGCCGTGCGCATTCCCACGGCGGTATGATCACCCTCACACGACGCACGATCACACGCTGCGCGAGACGGAAGGAGACG
AGACGATGACGGCGCAGGCT

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MDALYTEDQRMIRDTVRDFSTEVLAPNAAQWDQDGALPDGVVAQLGELGLLGMVVPAEWEGSYTDYTAYALAVEEIAAGC
ASCSTLMSVQNSVCCGPILSYGTDAQRDRWLRGLASGRMIGSFCLTEPQAGSEANNLRTRAVLKDGRWVLDGSKQFISNA
SRAAVAIVFAMTDPELGKRGLSAFIVPTDTPGFQVGKPEKKLGIRASDTCPITLEHCEIPEENLLGARGEGLKIALSNLE
GGRIGIAAQAVGIARAAFDKARRYAAERTQFGKPIAEHQAIAEKLADMATQLNAARLLVHHAARLRTAGLPCLSEASQAK
LFASEMSEAVCSAAIQIHGGYGYLADYEVERHYRDARITQIYEGTSEVQRMVIARQLLA

Sequences:

>Translated_379_residues
MDALYTEDQRMIRDTVRDFSTEVLAPNAAQWDQDGALPDGVVAQLGELGLLGMVVPAEWEGSYTDYTAYALAVEEIAAGC
ASCSTLMSVQNSVCCGPILSYGTDAQRDRWLRGLASGRMIGSFCLTEPQAGSEANNLRTRAVLKDGRWVLDGSKQFISNA
SRAAVAIVFAMTDPELGKRGLSAFIVPTDTPGFQVGKPEKKLGIRASDTCPITLEHCEIPEENLLGARGEGLKIALSNLE
GGRIGIAAQAVGIARAAFDKARRYAAERTQFGKPIAEHQAIAEKLADMATQLNAARLLVHHAARLRTAGLPCLSEASQAK
LFASEMSEAVCSAAIQIHGGYGYLADYEVERHYRDARITQIYEGTSEVQRMVIARQLLA
>Mature_379_residues
MDALYTEDQRMIRDTVRDFSTEVLAPNAAQWDQDGALPDGVVAQLGELGLLGMVVPAEWEGSYTDYTAYALAVEEIAAGC
ASCSTLMSVQNSVCCGPILSYGTDAQRDRWLRGLASGRMIGSFCLTEPQAGSEANNLRTRAVLKDGRWVLDGSKQFISNA
SRAAVAIVFAMTDPELGKRGLSAFIVPTDTPGFQVGKPEKKLGIRASDTCPITLEHCEIPEENLLGARGEGLKIALSNLE
GGRIGIAAQAVGIARAAFDKARRYAAERTQFGKPIAEHQAIAEKLADMATQLNAARLLVHHAARLRTAGLPCLSEASQAK
LFASEMSEAVCSAAIQIHGGYGYLADYEVERHYRDARITQIYEGTSEVQRMVIARQLLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=372, Percent_Identity=50.2688172043011, Blast_Score=355, Evalue=5e-98,
Organism=Homo sapiens, GI4501859, Length=373, Percent_Identity=42.0911528150134, Blast_Score=313, Evalue=1e-85,
Organism=Homo sapiens, GI7656849, Length=374, Percent_Identity=38.5026737967914, Blast_Score=263, Evalue=2e-70,
Organism=Homo sapiens, GI4557231, Length=375, Percent_Identity=36.8, Blast_Score=249, Evalue=4e-66,
Organism=Homo sapiens, GI187960098, Length=375, Percent_Identity=36.8, Blast_Score=249, Evalue=4e-66,
Organism=Homo sapiens, GI21361497, Length=367, Percent_Identity=38.1471389645777, Blast_Score=233, Evalue=2e-61,
Organism=Homo sapiens, GI226958412, Length=374, Percent_Identity=34.4919786096257, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI226958414, Length=334, Percent_Identity=35.0299401197605, Blast_Score=217, Evalue=1e-56,
Organism=Homo sapiens, GI4501857, Length=378, Percent_Identity=31.4814814814815, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI4557235, Length=340, Percent_Identity=38.5294117647059, Blast_Score=208, Evalue=5e-54,
Organism=Homo sapiens, GI76496475, Length=340, Percent_Identity=38.5294117647059, Blast_Score=208, Evalue=5e-54,
Organism=Homo sapiens, GI4503943, Length=381, Percent_Identity=29.3963254593176, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI7669494, Length=367, Percent_Identity=29.700272479564, Blast_Score=157, Evalue=1e-38,
Organism=Homo sapiens, GI211971008, Length=376, Percent_Identity=28.9893617021277, Blast_Score=132, Evalue=7e-31,
Organism=Homo sapiens, GI48976061, Length=376, Percent_Identity=28.9893617021277, Blast_Score=131, Evalue=8e-31,
Organism=Homo sapiens, GI38505218, Length=357, Percent_Identity=28.2913165266106, Blast_Score=110, Evalue=3e-24,
Organism=Escherichia coli, GI87081958, Length=381, Percent_Identity=31.758530183727, Blast_Score=175, Evalue=4e-45,
Organism=Escherichia coli, GI1786223, Length=379, Percent_Identity=28.4960422163588, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI87081702, Length=367, Percent_Identity=27.2479564032698, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI87082384, Length=280, Percent_Identity=29.6428571428571, Blast_Score=89, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17569725, Length=376, Percent_Identity=39.3617021276596, Blast_Score=267, Evalue=6e-72,
Organism=Caenorhabditis elegans, GI17534899, Length=377, Percent_Identity=39.2572944297082, Blast_Score=264, Evalue=6e-71,
Organism=Caenorhabditis elegans, GI17506239, Length=372, Percent_Identity=36.8279569892473, Blast_Score=261, Evalue=3e-70,
Organism=Caenorhabditis elegans, GI17508101, Length=370, Percent_Identity=36.4864864864865, Blast_Score=258, Evalue=4e-69,
Organism=Caenorhabditis elegans, GI17538396, Length=374, Percent_Identity=35.0267379679144, Blast_Score=249, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI17570075, Length=382, Percent_Identity=36.9109947643979, Blast_Score=246, Evalue=2e-65,
Organism=Caenorhabditis elegans, GI17533517, Length=373, Percent_Identity=35.3887399463807, Blast_Score=231, Evalue=4e-61,
Organism=Caenorhabditis elegans, GI71985184, Length=355, Percent_Identity=38.5915492957746, Blast_Score=227, Evalue=8e-60,
Organism=Caenorhabditis elegans, GI71990804, Length=293, Percent_Identity=38.2252559726962, Blast_Score=213, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17534353, Length=375, Percent_Identity=32, Blast_Score=185, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI71985192, Length=280, Percent_Identity=38.5714285714286, Blast_Score=180, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI17551932, Length=375, Percent_Identity=28.5333333333333, Blast_Score=165, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI17505929, Length=375, Percent_Identity=29.0666666666667, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI32563615, Length=233, Percent_Identity=36.0515021459227, Blast_Score=159, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI71982178, Length=267, Percent_Identity=31.0861423220974, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI17531909, Length=233, Percent_Identity=35.1931330472103, Blast_Score=134, Evalue=6e-32,
Organism=Caenorhabditis elegans, GI17562446, Length=290, Percent_Identity=28.6206896551724, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17531913, Length=174, Percent_Identity=32.183908045977, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI86563383, Length=278, Percent_Identity=29.8561151079137, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI86563381, Length=278, Percent_Identity=29.8561151079137, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI21356377, Length=373, Percent_Identity=48.5254691689008, Blast_Score=360, Evalue=1e-100,
Organism=Drosophila melanogaster, GI24646207, Length=376, Percent_Identity=43.6170212765958, Blast_Score=307, Evalue=8e-84,
Organism=Drosophila melanogaster, GI24666513, Length=370, Percent_Identity=39.1891891891892, Blast_Score=278, Evalue=5e-75,
Organism=Drosophila melanogaster, GI24660351, Length=375, Percent_Identity=38.1333333333333, Blast_Score=256, Evalue=1e-68,
Organism=Drosophila melanogaster, GI281363737, Length=384, Percent_Identity=35.9375, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI21355753, Length=384, Percent_Identity=34.1145833333333, Blast_Score=212, Evalue=4e-55,
Organism=Drosophila melanogaster, GI19920834, Length=381, Percent_Identity=30.1837270341207, Blast_Score=162, Evalue=4e-40,
Organism=Drosophila melanogaster, GI221473076, Length=216, Percent_Identity=27.7777777777778, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45550141, Length=216, Percent_Identity=27.7777777777778, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24652780, Length=235, Percent_Identity=24.2553191489362, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40828; Mature: 40828

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDALYTEDQRMIRDTVRDFSTEVLAPNAAQWDQDGALPDGVVAQLGELGLLGMVVPAEWE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCC
GSYTDYTAYALAVEEIAAGCASCSTLMSVQNSVCCGPILSYGTDAQRDRWLRGLASGRMI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHCCCCH
GSFCLTEPQAGSEANNLRTRAVLKDGRWVLDGSKQFISNASRAAVAIVFAMTDPELGKRG
HHHHCCCCCCCCCHHHHHHHHEEECCCEEECCCHHHHCCCCCEEEEEEEEECCHHHCCCC
LSAFIVPTDTPGFQVGKPEKKLGIRASDTCPITLEHCEIPEENLLGARGEGLKIALSNLE
CEEEEEECCCCCCCCCCCHHHHCCCCCCCCCEEECCCCCCHHHCCCCCCCCEEEEEECCC
GGRIGIAAQAVGIARAAFDKARRYAAERTQFGKPIAEHQAIAEKLADMATQLNAARLLVH
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HAARLRTAGLPCLSEASQAKLFASEMSEAVCSAAIQIHGGYGYLADYEVERHYRDARITQ
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEECCHHHHHHHHHHHHH
IYEGTSEVQRMVIARQLLA
HHCCHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDALYTEDQRMIRDTVRDFSTEVLAPNAAQWDQDGALPDGVVAQLGELGLLGMVVPAEWE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCC
GSYTDYTAYALAVEEIAAGCASCSTLMSVQNSVCCGPILSYGTDAQRDRWLRGLASGRMI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHCCCCH
GSFCLTEPQAGSEANNLRTRAVLKDGRWVLDGSKQFISNASRAAVAIVFAMTDPELGKRG
HHHHCCCCCCCCCHHHHHHHHEEECCCEEECCCHHHHCCCCCEEEEEEEEECCHHHCCCC
LSAFIVPTDTPGFQVGKPEKKLGIRASDTCPITLEHCEIPEENLLGARGEGLKIALSNLE
CEEEEEECCCCCCCCCCCHHHHCCCCCCCCCEEECCCCCCHHHCCCCCCCCEEEEEECCC
GGRIGIAAQAVGIARAAFDKARRYAAERTQFGKPIAEHQAIAEKLADMATQLNAARLLVH
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HAARLRTAGLPCLSEASQAKLFASEMSEAVCSAAIQIHGGYGYLADYEVERHYRDARITQ
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEECCHHHHHHHHHHHHH
IYEGTSEVQRMVIARQLLA
HHCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]