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The map label for this gene is acoR [H]

Identifier: 238024059

GI number: 238024059

Start: 743614

End: 745599

Strand: Reverse

Name: acoR [H]

Synonym: bglu_2g06200

Alternate gene names: 238024059

Gene position: 745599-743614 (Counterclockwise)

Preceding gene: 238024061

Following gene: 238024058

Centisome position: 26.37

GC content: 73.97

Gene sequence:

>1986_bases
ATGCCGCAATCCACCGTGCTGCCCGCCGCCGACAGCCGTCTCGACCTGCTCGCGCAGGCGCATGCGCGTTCCACATCGGG
CGGCCTGCGCGCCTCCGACCGCCCCGACTACGCTCCGCTTTCGCCGCGCGCGATGCGCGAGCTGATCGACGGCAACCGCT
CGCTCTACACGCACGCGCTGCCCGTGATGGAAGCGCTGCATGCGCAGATCGCCGACACCGAGAGCCTGGTACTCCTGACC
GATCGCGAAGGCCTGGTCCTGCACAGCATCGGCGACGCCGATTTCGTCGAGAAGGCGAACCGCGTCGCGCTGCGGCCCGG
CGCATCGTGGGCCGAGGGAACGCGCGGCACCAACGCGATCGGCACCGCGCTGGCCGCGAAACAGGCCGTCACCGTGCATG
GCAACGAGCACTTCCTGCGCGCGAATCACGTCTTGTCATGCTCGTGCGCACCGATCACCGACCCGTTCGGGCGCCTGCTC
GGCGCGCTCGACGTGAGCGGCGACCCGCGCGGCTTCGGCCCGCACACGCTCGCGCTCGTGAAGATGTCGGCGCAGCTGAT
CGAGAACCACCTGTTCGCGAACGCCTGCGACGCCGCCCTGCGGGTCCGTTTTCACGCGCATGCCGAATTCGTCGATTCGC
TGTTCGGCGGGCTGGTGGCGTTCCGGCCCGACGGCACGCTGCTGGCCGCCAACCGCAGCGCGCAGTTCCAGCTCGGCGCG
ACCCTCGACACGCTGCAGGACCAGGGCTGCAACGCGCTGTTCGGCGTGCCGTTCGCGCGGCTGGCCGACCACGCCGCGCG
CGACGCCGGCGCGACGCTGGCCCTCACGCTCGCCTCCGGGGTGCGCGTGTTCGCGCGCTGCGAGTACGCCGACGCGCCGC
GCACCGGGGCCGCCGCCGCGCGGCCGGCCGCCCCGGCCGCCCCGGCCACTCCGGCGGCGGCACGCCCGGCCGGCACCGTG
CCCGCGCTGCCCGATGCCGGCGATGCGCCCCCGGAGGCGATCACCTTCGCCACGCTCGATACCGGCGATGCGCGGCTGGC
CGCGATCCTGCAGCGGGTCGGCAAGATTCGCGGGCGCGACCTGCCGGTGCTGATCCTCGGCGAGACCGGCACCGGCAAGG
AGTGGCTCGCGCGGGCGCTGCATCATGCTTCGCCGCGCCGCGACGGCCCGTTCGTGGCCGTCAACTGCGCCGCGCTGCCC
GATTCGCTGATCGAGGCCGAGCTGTTCGGCTATGAGGACGGCGCGTTCACGGGCGCGCGGCGGCGCGGCAACCCGGGCCG
GATCGTGCAGGCCGACGGCGGCACGCTGTTCCTGGACGAGATCGGCGACATGCCGCTCGCGCAGCAGGTGCGGCTGATGC
GGGTGCTGCAGGAGCGCGCCGTGGTGCCGCTCGGCGGCGGCCGCGCACTGCCGGTGGACATCCGGGTGGTCTGCGCCACG
CACCGCGACCTGCGCGCGATGATCGCCGAGCAGACGTTTCGCGAGGATCTCTACTATCGGATCAACGGGCTCGCCGTCAC
GCTGCCGCCGCTCGCCCAACGCAGCGATCAGGCCGAGCTGGTGCGGCGCATGCTGGCCCGGCTCGCGCGCAGCGAAACGC
TGCCCACGCGCGTGTCCGACGCCGTCATCGAGGCGTTCGCGCGCTGCCGCTGGCCCGGCAACCTGAGGCAGATGGCCAAC
GTGCTGCGCACCGCCGGCATGCTGGCCGACGATGCGCCCGAGATCGACGTGGAGCACCTGCCGGACGACTTCTGGCTCGA
CTGCCCCGCGGAACCGGCCGGGCCGGCCGGCATCGCGGCGCGTGCCGCCGCGCCGGCCGCGTCCGCCTCGCCCGCCCCCG
CCACCACGCTCGACGCGCACCAGGCCTCGTTGATCGACAGCACGCTCGCGCGCCATCGCGGCAATGTGTCGGCGGCCGCG
CGCGAACTGGGGCTTGCACGCAACACCGTCTACCGGCACCTGCGGCGGCGCCGCGCCCAGCCCTGA

Upstream 100 bases:

>100_bases
GCGCGAGGCGCCGCGCGCTTGTATCATGACGCGTGCCGGCGCGGGCCTCCCGCGCCGGCACCACAATCGGAGTGCCGCCC
ACGGCTCCCTGGAGACAGAC

Downstream 100 bases:

>100_bases
GGACGGCGGGCGCTTCGGGTATGCTGACGGTCCCGCCGCCCGCGCGGCATCGACCGTTGCGCCGCCGATGACCACCGATC
CGTCCGAACCCGCTTACCGC

Product: Sigma-54 activated regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 661; Mature: 660

Protein sequence:

>661_residues
MPQSTVLPAADSRLDLLAQAHARSTSGGLRASDRPDYAPLSPRAMRELIDGNRSLYTHALPVMEALHAQIADTESLVLLT
DREGLVLHSIGDADFVEKANRVALRPGASWAEGTRGTNAIGTALAAKQAVTVHGNEHFLRANHVLSCSCAPITDPFGRLL
GALDVSGDPRGFGPHTLALVKMSAQLIENHLFANACDAALRVRFHAHAEFVDSLFGGLVAFRPDGTLLAANRSAQFQLGA
TLDTLQDQGCNALFGVPFARLADHAARDAGATLALTLASGVRVFARCEYADAPRTGAAAARPAAPAAPATPAAARPAGTV
PALPDAGDAPPEAITFATLDTGDARLAAILQRVGKIRGRDLPVLILGETGTGKEWLARALHHASPRRDGPFVAVNCAALP
DSLIEAELFGYEDGAFTGARRRGNPGRIVQADGGTLFLDEIGDMPLAQQVRLMRVLQERAVVPLGGGRALPVDIRVVCAT
HRDLRAMIAEQTFREDLYYRINGLAVTLPPLAQRSDQAELVRRMLARLARSETLPTRVSDAVIEAFARCRWPGNLRQMAN
VLRTAGMLADDAPEIDVEHLPDDFWLDCPAEPAGPAGIAARAAAPAASASPAPATTLDAHQASLIDSTLARHRGNVSAAA
RELGLARNTVYRHLRRRRAQP

Sequences:

>Translated_661_residues
MPQSTVLPAADSRLDLLAQAHARSTSGGLRASDRPDYAPLSPRAMRELIDGNRSLYTHALPVMEALHAQIADTESLVLLT
DREGLVLHSIGDADFVEKANRVALRPGASWAEGTRGTNAIGTALAAKQAVTVHGNEHFLRANHVLSCSCAPITDPFGRLL
GALDVSGDPRGFGPHTLALVKMSAQLIENHLFANACDAALRVRFHAHAEFVDSLFGGLVAFRPDGTLLAANRSAQFQLGA
TLDTLQDQGCNALFGVPFARLADHAARDAGATLALTLASGVRVFARCEYADAPRTGAAAARPAAPAAPATPAAARPAGTV
PALPDAGDAPPEAITFATLDTGDARLAAILQRVGKIRGRDLPVLILGETGTGKEWLARALHHASPRRDGPFVAVNCAALP
DSLIEAELFGYEDGAFTGARRRGNPGRIVQADGGTLFLDEIGDMPLAQQVRLMRVLQERAVVPLGGGRALPVDIRVVCAT
HRDLRAMIAEQTFREDLYYRINGLAVTLPPLAQRSDQAELVRRMLARLARSETLPTRVSDAVIEAFARCRWPGNLRQMAN
VLRTAGMLADDAPEIDVEHLPDDFWLDCPAEPAGPAGIAARAAAPAASASPAPATTLDAHQASLIDSTLARHRGNVSAAA
RELGLARNTVYRHLRRRRAQP
>Mature_660_residues
PQSTVLPAADSRLDLLAQAHARSTSGGLRASDRPDYAPLSPRAMRELIDGNRSLYTHALPVMEALHAQIADTESLVLLTD
REGLVLHSIGDADFVEKANRVALRPGASWAEGTRGTNAIGTALAAKQAVTVHGNEHFLRANHVLSCSCAPITDPFGRLLG
ALDVSGDPRGFGPHTLALVKMSAQLIENHLFANACDAALRVRFHAHAEFVDSLFGGLVAFRPDGTLLAANRSAQFQLGAT
LDTLQDQGCNALFGVPFARLADHAARDAGATLALTLASGVRVFARCEYADAPRTGAAAARPAAPAAPATPAAARPAGTVP
ALPDAGDAPPEAITFATLDTGDARLAAILQRVGKIRGRDLPVLILGETGTGKEWLARALHHASPRRDGPFVAVNCAALPD
SLIEAELFGYEDGAFTGARRRGNPGRIVQADGGTLFLDEIGDMPLAQQVRLMRVLQERAVVPLGGGRALPVDIRVVCATH
RDLRAMIAEQTFREDLYYRINGLAVTLPPLAQRSDQAELVRRMLARLARSETLPTRVSDAVIEAFARCRWPGNLRQMANV
LRTAGMLADDAPEIDVEHLPDDFWLDCPAEPAGPAGIAARAAAPAASASPAPATTLDAHQASLIDSTLARHRGNVSAAAR
ELGLARNTVYRHLRRRRAQP

Specific function: Required for sigma-54-dependent transcription of acoXABC [H]

COG id: COG3284

COG function: function code QK; Transcriptional activator of acetoin/glycerol metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

Organism=Escherichia coli, GI1789233, Length=319, Percent_Identity=38.2445141065831, Blast_Score=228, Evalue=1e-60,
Organism=Escherichia coli, GI87082117, Length=226, Percent_Identity=49.1150442477876, Blast_Score=210, Evalue=2e-55,
Organism=Escherichia coli, GI1788905, Length=310, Percent_Identity=38.3870967741935, Blast_Score=208, Evalue=7e-55,
Organism=Escherichia coli, GI1790299, Length=317, Percent_Identity=40.6940063091483, Blast_Score=206, Evalue=3e-54,
Organism=Escherichia coli, GI1788550, Length=315, Percent_Identity=38.7301587301587, Blast_Score=204, Evalue=2e-53,
Organism=Escherichia coli, GI1790437, Length=296, Percent_Identity=40.2027027027027, Blast_Score=199, Evalue=6e-52,
Organism=Escherichia coli, GI1789087, Length=320, Percent_Identity=38.4375, Blast_Score=191, Evalue=1e-49,
Organism=Escherichia coli, GI1786524, Length=310, Percent_Identity=39.0322580645161, Blast_Score=188, Evalue=1e-48,
Organism=Escherichia coli, GI87081872, Length=316, Percent_Identity=37.0253164556962, Blast_Score=185, Evalue=9e-48,
Organism=Escherichia coli, GI87082152, Length=341, Percent_Identity=36.6568914956012, Blast_Score=174, Evalue=2e-44,
Organism=Escherichia coli, GI1787583, Length=232, Percent_Identity=35.7758620689655, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI1789828, Length=299, Percent_Identity=34.4481605351171, Blast_Score=135, Evalue=9e-33,
Organism=Escherichia coli, GI87081858, Length=300, Percent_Identity=27.6666666666667, Blast_Score=129, Evalue=4e-31,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR002078 [H]

Pfam domain/function: PF02954 HTH_8; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 70134; Mature: 70002

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: PS00675 SIGMA54_INTERACT_1 ; PS00676 SIGMA54_INTERACT_2 ; PS50045 SIGMA54_INTERACT_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQSTVLPAADSRLDLLAQAHARSTSGGLRASDRPDYAPLSPRAMRELIDGNRSLYTHAL
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHH
PVMEALHAQIADTESLVLLTDREGLVLHSIGDADFVEKANRVALRPGASWAEGTRGTNAI
HHHHHHHHHHCCCCCEEEEECCCCEEEEECCCHHHHHHCCCEEECCCCCCCCCCCCCHHH
GTALAAKQAVTVHGNEHFLRANHVLSCSCAPITDPFGRLLGALDVSGDPRGFGPHTLALV
HHHHHHCCEEEEECCCEEEECCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH
KMSAQLIENHLFANACDAALRVRFHAHAEFVDSLFGGLVAFRPDGTLLAANRSAQFQLGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEECCCCCEEECC
TLDTLQDQGCNALFGVPFARLADHAARDAGATLALTLASGVRVFARCEYADAPRTGAAAA
HHHHHHCCCCCEEECCCHHHHHHHHHHCCCCEEEEEHHHCCEEEEEECCCCCCCCCCCCC
RPAAPAAPATPAAARPAGTVPALPDAGDAPPEAITFATLDTGDARLAAILQRVGKIRGRD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCC
LPVLILGETGTGKEWLARALHHASPRRDGPFVAVNCAALPDSLIEAELFGYEDGAFTGAR
CCEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEHHHCCHHHHHHHHHCCCCCCCCCCC
RRGNPGRIVQADGGTLFLDEIGDMPLAQQVRLMRVLQERAVVPLGGGRALPVDIRVVCAT
CCCCCCCEEEECCCEEEHHHHCCCCHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEEEEC
HRDLRAMIAEQTFREDLYYRINGLAVTLPPLAQRSDQAELVRRMLARLARSETLPTRVSD
CHHHHHHHHHHHHHHHHHEEECCEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHH
AVIEAFARCRWPGNLRQMANVLRTAGMLADDAPEIDVEHLPDDFWLDCPAEPAGPAGIAA
HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEECCCCCCCCCCHHH
RAAAPAASASPAPATTLDAHQASLIDSTLARHRGNVSAAARELGLARNTVYRHLRRRRAQ
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
P
C
>Mature Secondary Structure 
PQSTVLPAADSRLDLLAQAHARSTSGGLRASDRPDYAPLSPRAMRELIDGNRSLYTHAL
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHH
PVMEALHAQIADTESLVLLTDREGLVLHSIGDADFVEKANRVALRPGASWAEGTRGTNAI
HHHHHHHHHHCCCCCEEEEECCCCEEEEECCCHHHHHHCCCEEECCCCCCCCCCCCCHHH
GTALAAKQAVTVHGNEHFLRANHVLSCSCAPITDPFGRLLGALDVSGDPRGFGPHTLALV
HHHHHHCCEEEEECCCEEEECCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH
KMSAQLIENHLFANACDAALRVRFHAHAEFVDSLFGGLVAFRPDGTLLAANRSAQFQLGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEECCCCCEEECC
TLDTLQDQGCNALFGVPFARLADHAARDAGATLALTLASGVRVFARCEYADAPRTGAAAA
HHHHHHCCCCCEEECCCHHHHHHHHHHCCCCEEEEEHHHCCEEEEEECCCCCCCCCCCCC
RPAAPAAPATPAAARPAGTVPALPDAGDAPPEAITFATLDTGDARLAAILQRVGKIRGRD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCC
LPVLILGETGTGKEWLARALHHASPRRDGPFVAVNCAALPDSLIEAELFGYEDGAFTGAR
CCEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEHHHCCHHHHHHHHHCCCCCCCCCCC
RRGNPGRIVQADGGTLFLDEIGDMPLAQQVRLMRVLQERAVVPLGGGRALPVDIRVVCAT
CCCCCCCEEEECCCEEEHHHHCCCCHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEEEEC
HRDLRAMIAEQTFREDLYYRINGLAVTLPPLAQRSDQAELVRRMLARLARSETLPTRVSD
CHHHHHHHHHHHHHHHHHEEECCEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHH
AVIEAFARCRWPGNLRQMANVLRTAGMLADDAPEIDVEHLPDDFWLDCPAEPAGPAGIAA
HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEECCCCCCCCCCHHH
RAAAPAASASPAPATTLDAHQASLIDSTLARHRGNVSAAARELGLARNTVYRHLRRRRAQ
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1378052 [H]