| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024046
Identifier: 238024046
GI number: 238024046
Start: 729672
End: 730208
Strand: Direct
Name: 238024046
Synonym: bglu_2g06020
Alternate gene names: NA
Gene position: 729672-730208 (Clockwise)
Preceding gene: 238024045
Following gene: 238024048
Centisome position: 25.81
GC content: 59.59
Gene sequence:
>537_bases GTGACACGGCAAACGCATCGGACGCTGCGCGGAATCCGGCTGACAGGTGGACTGGCGGCGGCCACTGCACTGCTTGTCGG CTGCGGCATGTGGCAGTCGATCAAGGAAACGACCGTCGACGCCACGCGCGCGGTATTCGTCGAGAAGGTGAAACAGATGA ACCTTGTGATCGAAAGCCACGCTGCGCTGAACCCGAACGAGCAGGGCCGGTCACTGCCGGTCGTACTACGCGTCTATCAA TTGAAGGATACGAAGACCTTTGAAAATGCGGCTTATGGTCAGCTACTTGACGATGATCGCGCGTTGCTAAAGGCCGACCT CACCGGCAGCATGGAGGCCATACTCGGCCCCGGCGCAACGGTAACGCTGTCGGCGCCAATGGCGGACGATGTGCAGGCTG TGGGCGTCGTGGGTTTTTTTCGCGATCAGGGCGGCGCCTCGTGGCAACTGGTAATTCCGAAGTCGCAGTGGAAGAAGACG GATCCCGTGAAGCTCATCGTAACGGGCAACCAGATTGAACTGGGCACGGAACATTGA
Upstream 100 bases:
>100_bases GCTATGCCTGCTTCCATTACGCGGTGCGGCTCGTTTTATATCAGGGTGTAGGCGGGGCGGTTCGGCGTTATCCGCCCGTA CTCAAGACGGGAGACTGGTT
Downstream 100 bases:
>100_bases TGAAGCAACGCATGACCACGGCTGCTATGAATACACCGGTCACATGCTGCTCCCAGCGAGTTATTGTCGAATCTGGTGTA CAGGAGGGAGCGGGAGAAGG
Product: type VI secretion lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MTRQTHRTLRGIRLTGGLAAATALLVGCGMWQSIKETTVDATRAVFVEKVKQMNLVIESHAALNPNEQGRSLPVVLRVYQ LKDTKTFENAAYGQLLDDDRALLKADLTGSMEAILGPGATVTLSAPMADDVQAVGVVGFFRDQGGASWQLVIPKSQWKKT DPVKLIVTGNQIELGTEH
Sequences:
>Translated_178_residues MTRQTHRTLRGIRLTGGLAAATALLVGCGMWQSIKETTVDATRAVFVEKVKQMNLVIESHAALNPNEQGRSLPVVLRVYQ LKDTKTFENAAYGQLLDDDRALLKADLTGSMEAILGPGATVTLSAPMADDVQAVGVVGFFRDQGGASWQLVIPKSQWKKT DPVKLIVTGNQIELGTEH >Mature_177_residues TRQTHRTLRGIRLTGGLAAATALLVGCGMWQSIKETTVDATRAVFVEKVKQMNLVIESHAALNPNEQGRSLPVVLRVYQL KDTKTFENAAYGQLLDDDRALLKADLTGSMEAILGPGATVTLSAPMADDVQAVGVVGFFRDQGGASWQLVIPKSQWKKTD PVKLIVTGNQIELGTEH
Specific function: Unknown
COG id: COG3521
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19256; Mature: 19125
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRQTHRTLRGIRLTGGLAAATALLVGCGMWQSIKETTVDATRAVFVEKVKQMNLVIESH CCCHHHHHHHCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECC AALNPNEQGRSLPVVLRVYQLKDTKTFENAAYGQLLDDDRALLKADLTGSMEAILGPGAT CCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHEEECCCCCCHHHHCCCCCE VTLSAPMADDVQAVGVVGFFRDQGGASWQLVIPKSQWKKTDPVKLIVTGNQIELGTEH EEEECCCCCCHHHHEEEEEEECCCCCEEEEEECHHHCCCCCCEEEEEECCEEECCCCC >Mature Secondary Structure TRQTHRTLRGIRLTGGLAAATALLVGCGMWQSIKETTVDATRAVFVEKVKQMNLVIESH CCHHHHHHHCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECC AALNPNEQGRSLPVVLRVYQLKDTKTFENAAYGQLLDDDRALLKADLTGSMEAILGPGAT CCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHEEECCCCCCHHHHCCCCCE VTLSAPMADDVQAVGVVGFFRDQGGASWQLVIPKSQWKKTDPVKLIVTGNQIELGTEH EEEECCCCCCHHHHEEEEEEECCCCCEEEEEECHHHCCCCCCEEEEEECCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA