| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is purU [H]
Identifier: 238024039
GI number: 238024039
Start: 714135
End: 715013
Strand: Reverse
Name: purU [H]
Synonym: bglu_2g05930
Alternate gene names: 238024039
Gene position: 715013-714135 (Counterclockwise)
Preceding gene: 238024047
Following gene: 238024028
Centisome position: 25.29
GC content: 68.03
Gene sequence:
>879_bases ATGACCGGCTCCGAACGCAATTCCCGATTCCTGCTGACGCTGTCGTGCCCGAGCGCGGCCGGCCAGGTGGCCGCCGTGGT CGGCGTGCTCGACCGCCACCAGTGCTACGTCGACGAGCTGACCGTGTTCGACGACGACCTGAGCGGGCGCTTCTTCGTGC GCTGCGCGTTCCATCCGGCCGCCGCGGGCAGCACGCCCGACATCGACGCGCTGCGCGCCGAGTTCGCGCCGATCGCGGCG CGCTTCGACATGCAATGGGCAATCCACGACGCCGGCGCGCGCCCGAAGGTGATGATCCTCGTCTCGAAGCTCGAGCACTG CCTAGCGGACCTGCTGTTCCGCTGGAAGATGGGCGAGCTGAAGATGGACATCGTCGCGATCGCCTCGAACCACCCCGATC TCGAACCGCTCGCGGCCCAGCACGGGCTGCCGTTCCGCCATTTCCCGATCACGCCCGAGACCAAGGCGCAGCAGGAGGCG CAGTGGCTCGACCTGTTCGAATCGAGCGGCGCCGAGCTGGTGATCCTCGCGCGCTACATGCAGGTGCTCTCGCCCGGCAC GAGCGCGCGGCTGGCCAACCGCGCGATCAACATCCACCACTCGTTCCTGCCCGGCTTCAAGGGTGCCAAGCCCTACCACC AGGCGCACGCGCGCGGCGTGAAACTGATCGGCGCCACCGCTCATTTCGTGACCGACGATCTCGACGAAGGCCCCATCATC GAGCAGGTGGTGGAGCGCGTCGATCACGCCTATCGGCCCGAGCAGTTGCTGACGGTGGGCCGCGACGTCGAATCCATCAC GCTCGCGCGCGCCGTGAAGGCGTTCATCGAGCGCCGCGTGTTCCTGAACGGCGACCGCACCGTGGTGTTCGGGCAGTAA
Upstream 100 bases:
>100_bases TTCGATTCTATCCACCGAGGCGCGCAACTGGTCTACTGGAAACCGGCCGCTTCGGTGCGGCCGCGTGCGGCGCGCCGCGC CGCCGTGATCCGAGGAAAGC
Downstream 100 bases:
>100_bases TTCGGGCAGCAAGGCCCCCCGCCTTCCGGCGGCCGTCACGCCGTGTGCCGGCCACCGGCCCGCGATTCACGATGTTTCCT CGTCTCTCACCCTGAAGGCC
Product: formyltetrahydrofolate deformylase
Products: NA
Alternate protein names: Formyl-FH(4) hydrolase [H]
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MTGSERNSRFLLTLSCPSAAGQVAAVVGVLDRHQCYVDELTVFDDDLSGRFFVRCAFHPAAAGSTPDIDALRAEFAPIAA RFDMQWAIHDAGARPKVMILVSKLEHCLADLLFRWKMGELKMDIVAIASNHPDLEPLAAQHGLPFRHFPITPETKAQQEA QWLDLFESSGAELVILARYMQVLSPGTSARLANRAINIHHSFLPGFKGAKPYHQAHARGVKLIGATAHFVTDDLDEGPII EQVVERVDHAYRPEQLLTVGRDVESITLARAVKAFIERRVFLNGDRTVVFGQ
Sequences:
>Translated_292_residues MTGSERNSRFLLTLSCPSAAGQVAAVVGVLDRHQCYVDELTVFDDDLSGRFFVRCAFHPAAAGSTPDIDALRAEFAPIAA RFDMQWAIHDAGARPKVMILVSKLEHCLADLLFRWKMGELKMDIVAIASNHPDLEPLAAQHGLPFRHFPITPETKAQQEA QWLDLFESSGAELVILARYMQVLSPGTSARLANRAINIHHSFLPGFKGAKPYHQAHARGVKLIGATAHFVTDDLDEGPII EQVVERVDHAYRPEQLLTVGRDVESITLARAVKAFIERRVFLNGDRTVVFGQ >Mature_291_residues TGSERNSRFLLTLSCPSAAGQVAAVVGVLDRHQCYVDELTVFDDDLSGRFFVRCAFHPAAAGSTPDIDALRAEFAPIAAR FDMQWAIHDAGARPKVMILVSKLEHCLADLLFRWKMGELKMDIVAIASNHPDLEPLAAQHGLPFRHFPITPETKAQQEAQ WLDLFESSGAELVILARYMQVLSPGTSARLANRAINIHHSFLPGFKGAKPYHQAHARGVKLIGATAHFVTDDLDEGPIIE QVVERVDHAYRPEQLLTVGRDVESITLARAVKAFIERRVFLNGDRTVVFGQ
Specific function: Produces Formate From Formyl-Tetrahydrofolate. Provides The Major Source Of Formate For The Purt-Dependent Synthesis Of 5'-Phosphoribosyl-N-Formylglycinamide (Fgar) During Aerobic Growth. Has A Role In Regulating The One-Carbon Pool. [C]
COG id: COG0788
COG function: function code F; Formyltetrahydrofolate hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Escherichia coli, GI1787483, Length=285, Percent_Identity=39.2982456140351, Blast_Score=208, Evalue=3e-55, Organism=Escherichia coli, GI1788846, Length=150, Percent_Identity=29.3333333333333, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17567511, Length=160, Percent_Identity=36.875, Blast_Score=92, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002376 - InterPro: IPR004810 [H]
Pfam domain/function: PF00551 Formyl_trans_N [H]
EC number: =3.5.1.10 [H]
Molecular weight: Translated: 32313; Mature: 32182
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSERNSRFLLTLSCPSAAGQVAAVVGVLDRHQCYVDELTVFDDDLSGRFFVRCAFHPA CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHEEEECCCCCCEEEEEEEECCC AAGSTPDIDALRAEFAPIAARFDMQWAIHDAGARPKVMILVSKLEHCLADLLFRWKMGEL CCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHCCCCE KMDIVAIASNHPDLEPLAAQHGLPFRHFPITPETKAQQEAQWLDLFESSGAELVILARYM EEEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHH QVLSPGTSARLANRAINIHHSFLPGFKGAKPYHQAHARGVKLIGATAHFVTDDLDEGPII HHHCCCCHHHHHHHHEEEEHHHCCCCCCCCCHHHHHHCCEEEEECCHHHHCCCCCCCCHH EQVVERVDHAYRPEQLLTVGRDVESITLARAVKAFIERRVFLNGDRTVVFGQ HHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCEEEEECC >Mature Secondary Structure TGSERNSRFLLTLSCPSAAGQVAAVVGVLDRHQCYVDELTVFDDDLSGRFFVRCAFHPA CCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHEEEECCCCCCEEEEEEEECCC AAGSTPDIDALRAEFAPIAARFDMQWAIHDAGARPKVMILVSKLEHCLADLLFRWKMGEL CCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHCCCCE KMDIVAIASNHPDLEPLAAQHGLPFRHFPITPETKAQQEAQWLDLFESSGAELVILARYM EEEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHH QVLSPGTSARLANRAINIHHSFLPGFKGAKPYHQAHARGVKLIGATAHFVTDDLDEGPII HHHCCCCHHHHHHHHEEEEHHHCCCCCCCCCHHHHHHCCEEEEECCHHHHCCCCCCCCHH EQVVERVDHAYRPEQLLTVGRDVESITLARAVKAFIERRVFLNGDRTVVFGQ HHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7543100 [H]