| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024029
Identifier: 238024029
GI number: 238024029
Start: 700624
End: 701595
Strand: Direct
Name: 238024029
Synonym: bglu_2g05830
Alternate gene names: NA
Gene position: 700624-701595 (Clockwise)
Preceding gene: 238024026
Following gene: 238024030
Centisome position: 24.78
GC content: 64.3
Gene sequence:
>972_bases ATGAGCACGCTGCATCAGGACAGCATCATCATCGATGGCCTGAACATTTCGAAATTCGATCGGTCGGTCTTCGAGGACAT GCGCAAGGGGGGGGTGACGGCGGCGAACTGCACGGTGTCGGTGTGGGACAGCTTCATCAAGACGGTCGACAATATCGGCA CGATGAAGCGGCAGATCCGCGAGAACAGCGAACTGCTCACGCTGGTGCGCACCACCGACGACATCGCGCGCGCCAAGCGC GAGGGCAAGACCGGCGTGATCCTCGGCTTCCAGAACGCGCATGCGTTCGAGGACAACCTGTCCTACATCGAGGCGTTCGC CGACATGGGCGTGCGCGTGGTGCAGCTCTGCTACAACACCCAGAACCTGGTCGGCACCGGCTGCTACGAGCGCGACGGCG GCCTGTCGGACTTCGGACGCGAGGTGATCACCGAGATGAACCGCGTCGGCATCATGGTCGACCTCTCGCACGTGGGCGGC AACACCTCGTCCGAGGCGATCGCGTTCTCGAAGAAGCCGGTCACCTATTCGCACTGCCTGCCCTCGGGCCTCAAGGAGCA CCCGCGCAACAAGAGCGACGCGCAGCTGCGCGAGATCGCGGACGCGGGCGGCTTCGTCGGCGTGACGATGTTCGCGCCGT TCCTCAAGCGCGGCATCGACGCGACGATCGACGACTACGTCGAGGCGATCGATTACGTGGTGAACCTGATCGGCGAGGAC GCGGTGGGCATCGGCACCGACTTCACGCAGGGCTACAGCACCGAGTTCTTCGACATGCTCACCCACGACAAGGGCCGCTA CCGCCGCCTGACCAACTTCGGCAAGGTGGTGAACCCGGAAGGCATCCGCACCATCGGCGAATTTCCGAACCTGACCGCCG CGATGGAGCGCGCCGGCTGGAAGGCCTCGCGCATCCGCAAGATCATGGGCGAGAACTGGGTGCGCGTGTTCAAGGACGTC TGGGGCGCCTGA
Upstream 100 bases:
>100_bases AACCCGCTCAGAGGCCTTGCAGGGCGGGCGTCTGGCGGCAACGGCGCCCACCGGTTCGAGACCGGGTCGTCCCACCCCAC GCGACATTCTGGAGAAACGC
Downstream 100 bases:
>100_bases GCCGCCCGCCGCCCGCGGCCAGCCGGCCCGCTCCCTTCATATCATCCGGTCCGCGCTGCCGCCTGGCGGCGGCGCGCGGG CCGGGTCGCGCCCCGCTCAC
Product: Renal dipeptidase family protein
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MSTLHQDSIIIDGLNISKFDRSVFEDMRKGGVTAANCTVSVWDSFIKTVDNIGTMKRQIRENSELLTLVRTTDDIARAKR EGKTGVILGFQNAHAFEDNLSYIEAFADMGVRVVQLCYNTQNLVGTGCYERDGGLSDFGREVITEMNRVGIMVDLSHVGG NTSSEAIAFSKKPVTYSHCLPSGLKEHPRNKSDAQLREIADAGGFVGVTMFAPFLKRGIDATIDDYVEAIDYVVNLIGED AVGIGTDFTQGYSTEFFDMLTHDKGRYRRLTNFGKVVNPEGIRTIGEFPNLTAAMERAGWKASRIRKIMGENWVRVFKDV WGA
Sequences:
>Translated_323_residues MSTLHQDSIIIDGLNISKFDRSVFEDMRKGGVTAANCTVSVWDSFIKTVDNIGTMKRQIRENSELLTLVRTTDDIARAKR EGKTGVILGFQNAHAFEDNLSYIEAFADMGVRVVQLCYNTQNLVGTGCYERDGGLSDFGREVITEMNRVGIMVDLSHVGG NTSSEAIAFSKKPVTYSHCLPSGLKEHPRNKSDAQLREIADAGGFVGVTMFAPFLKRGIDATIDDYVEAIDYVVNLIGED AVGIGTDFTQGYSTEFFDMLTHDKGRYRRLTNFGKVVNPEGIRTIGEFPNLTAAMERAGWKASRIRKIMGENWVRVFKDV WGA >Mature_322_residues STLHQDSIIIDGLNISKFDRSVFEDMRKGGVTAANCTVSVWDSFIKTVDNIGTMKRQIRENSELLTLVRTTDDIARAKRE GKTGVILGFQNAHAFEDNLSYIEAFADMGVRVVQLCYNTQNLVGTGCYERDGGLSDFGREVITEMNRVGIMVDLSHVGGN TSSEAIAFSKKPVTYSHCLPSGLKEHPRNKSDAQLREIADAGGFVGVTMFAPFLKRGIDATIDDYVEAIDYVVNLIGEDA VGIGTDFTQGYSTEFFDMLTHDKGRYRRLTNFGKVVNPEGIRTIGEFPNLTAAMERAGWKASRIRKIMGENWVRVFKDVW GA
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI189458885, Length=291, Percent_Identity=25.7731958762887, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI4758190, Length=291, Percent_Identity=25.7731958762887, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI11641269, Length=317, Percent_Identity=24.6056782334385, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI193211608, Length=326, Percent_Identity=21.7791411042945, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI193211610, Length=326, Percent_Identity=21.7791411042945, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI281362638, Length=318, Percent_Identity=29.874213836478, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI281362636, Length=318, Percent_Identity=29.874213836478, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI221475880, Length=317, Percent_Identity=27.1293375394322, Blast_Score=124, Evalue=9e-29, Organism=Drosophila melanogaster, GI161083233, Length=310, Percent_Identity=24.5161290322581, Blast_Score=110, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 35837; Mature: 35706
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLHQDSIIIDGLNISKFDRSVFEDMRKGGVTAANCTVSVWDSFIKTVDNIGTMKRQIR CCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH ENSELLTLVRTTDDIARAKREGKTGVILGFQNAHAFEDNLSYIEAFADMGVRVVQLCYNT CCCCEEEEEHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC QNLVGTGCYERDGGLSDFGREVITEMNRVGIMVDLSHVGGNTSSEAIAFSKKPVTYSHCL CHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEHHCCCCCCCCCEEECCCCCCHHHHC PSGLKEHPRNKSDAQLREIADAGGFVGVTMFAPFLKRGIDATIDDYVEAIDYVVNLIGED CHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC AVGIGTDFTQGYSTEFFDMLTHDKGRYRRLTNFGKVVNPEGIRTIGEFPNLTAAMERAGW CCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHCCC KASRIRKIMGENWVRVFKDVWGA HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STLHQDSIIIDGLNISKFDRSVFEDMRKGGVTAANCTVSVWDSFIKTVDNIGTMKRQIR CCCCCCCEEEECCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH ENSELLTLVRTTDDIARAKREGKTGVILGFQNAHAFEDNLSYIEAFADMGVRVVQLCYNT CCCCEEEEEHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC QNLVGTGCYERDGGLSDFGREVITEMNRVGIMVDLSHVGGNTSSEAIAFSKKPVTYSHCL CHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEHHCCCCCCCCCEEECCCCCCHHHHC PSGLKEHPRNKSDAQLREIADAGGFVGVTMFAPFLKRGIDATIDDYVEAIDYVVNLIGED CHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC AVGIGTDFTQGYSTEFFDMLTHDKGRYRRLTNFGKVVNPEGIRTIGEFPNLTAAMERAGW CCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHCCC KASRIRKIMGENWVRVFKDVWGA HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]