Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238024027

Identifier: 238024027

GI number: 238024027

Start: 697740

End: 699017

Strand: Reverse

Name: 238024027

Synonym: bglu_2g05810

Alternate gene names: NA

Gene position: 699017-697740 (Counterclockwise)

Preceding gene: 238024028

Following gene: 238024025

Centisome position: 24.72

GC content: 75.04

Gene sequence:

>1278_bases
GTGTCAGACGACGCCGCGCTGGCGAGCGCCTATCTCGCCTACCTGCACACCCCGAACGACGACACCGGCCTGGCGCTCGC
GCGCGGCCTGCGCGAGGCCGGCCATGCCGCCGCCGCGTCCGCGCAGGCCACGCGCTGCGCCGCCGATGCGGCCACGCCGC
TCGCGCTCGCGCTGGCCGGCATCGAGATGAACCACCTGGGCCGCTTCGCCGAGGCCGAGGCGCTGCTCGCGCGCGCCGAG
GCCGGCCTCGGCGGCGACCCGAACCGCTACGTGGTGCGCTTCGAGCAGACCATCGCGCGCTACGGCCAGGGCCGCTATCG
CGACGCGCACCGGCTGTTCCGCGAGCTGCGCGACGCGCCGCACCGCGCGCGCGTGGTCGAGACGCTCTATCCGGGCCACG
GCGGCAGCTTCGACTGGGCCGAGCGCAAGTTCCTCGGCCATCACGATCCGGTGGCCGGCAAGCGCGTGCTGGTGATGATG
GAAGGCGGCGCCGGCGACCTGTTCATGCATTCGCGCTACCTCGCCTGCCTGCGCGAGGAAGGCGCGGCCTCGGTGGACGT
GCAGGTTGCCGAGGCCGCGCGCGGCGTGCTGCGCGAGGACGGCTTCGTGCGCGAGAGCGGGCCGCATGTGGGTGCGCTGG
CCGACCAGTGCGATTGCGTGACCTGGCTGTTCAATTTGTTCGCGCGCTACCAGACCAGCCCCTACCAGCCGCGCTTCGAC
ACGCCCTACCTCGACACGCCGCCGCCCTCGGCGCTGCCCGAGGCCGTGCGTGCCGCGCTCGAGGCGCCGGGGCTCGCGCG
CGTCGGCCTGGTCTGGCGCAGCCAGTCCGCCGTGCGCCACGAGCCCTATCGTTCGCTCGCGCTCGACGCGCTCGCGCCGC
TTCTCGCGCAGCCGGGCTGCCGCTTCTATTCGCTGCAGGTGGGCGAGGCCGGCCAGGCGCGCGGCGAGGCCGAGCGCGCG
GCGCTGGCCGCGCACCGCGTGGTCGATCTGGCGCCGGCGCTGCACCGCTTCGCCGACACGGCCGCCGTGCTCGGCCAGCT
CGACCTGCTGATCTCGATCGACACCGGCACCGCGCATCTGGCCGCGGCGATGGGCCGGCCCGTCTGGCTGCTGCTCTCGC
ACGCGGGCGACAGCCGCTGGCTCGACCACGTCGATTTCACGCCCTGGTATCCGTCCATGCGGCTGTTCCGCCAGCCGGTG
CTGGGCGATTGGCGCACGCCGGTGGCCGAGGCGGCCGCGGCGCTGGGCGCGGGGGACCATGCAGGGCGGGCAGCCTGA

Upstream 100 bases:

>100_bases
GCTGCCGATCGGCGCATCGCAACCGGTGCTCGCGCTGCACGCCTGACGCTCCGCCGCGGCCGGACGCGGGGGCTCGGCAA
GGCGCCCGAGGACAACCCAC

Downstream 100 bases:

>100_bases
AGCGGCGGCCCGCACCCTCACCGCCGGCTCCAGCGCGGCCCCGCCTGGTTGCATCCGCAACAAAATGACGACGGCCCGCG
CGCACGCGGGCCGTCGGCCT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain Protein; Tetratricopeptide Repeat-Containing Protein; TPR Repeat Protein; Tetratricopeptide Repeat Family Protein; TPR Repeat Containing Protein; FlbA Protein; Sulfotransferase; TPR Repeat; Exostosin Family Protein; Tetratricopeptide Tpr_2 Repeat Protein; Methyltransferase Type; Glycosyltransferase Family 9 Tpr Repeat Domain; TPR/Sulfotransferase Domain-Containing Protein; Flagellin Protein FlbA; O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MSDDAALASAYLAYLHTPNDDTGLALARGLREAGHAAAASAQATRCAADAATPLALALAGIEMNHLGRFAEAEALLARAE
AGLGGDPNRYVVRFEQTIARYGQGRYRDAHRLFRELRDAPHRARVVETLYPGHGGSFDWAERKFLGHHDPVAGKRVLVMM
EGGAGDLFMHSRYLACLREEGAASVDVQVAEAARGVLREDGFVRESGPHVGALADQCDCVTWLFNLFARYQTSPYQPRFD
TPYLDTPPPSALPEAVRAALEAPGLARVGLVWRSQSAVRHEPYRSLALDALAPLLAQPGCRFYSLQVGEAGQARGEAERA
ALAAHRVVDLAPALHRFADTAAVLGQLDLLISIDTGTAHLAAAMGRPVWLLLSHAGDSRWLDHVDFTPWYPSMRLFRQPV
LGDWRTPVAEAAAALGAGDHAGRAA

Sequences:

>Translated_425_residues
MSDDAALASAYLAYLHTPNDDTGLALARGLREAGHAAAASAQATRCAADAATPLALALAGIEMNHLGRFAEAEALLARAE
AGLGGDPNRYVVRFEQTIARYGQGRYRDAHRLFRELRDAPHRARVVETLYPGHGGSFDWAERKFLGHHDPVAGKRVLVMM
EGGAGDLFMHSRYLACLREEGAASVDVQVAEAARGVLREDGFVRESGPHVGALADQCDCVTWLFNLFARYQTSPYQPRFD
TPYLDTPPPSALPEAVRAALEAPGLARVGLVWRSQSAVRHEPYRSLALDALAPLLAQPGCRFYSLQVGEAGQARGEAERA
ALAAHRVVDLAPALHRFADTAAVLGQLDLLISIDTGTAHLAAAMGRPVWLLLSHAGDSRWLDHVDFTPWYPSMRLFRQPV
LGDWRTPVAEAAAALGAGDHAGRAA
>Mature_424_residues
SDDAALASAYLAYLHTPNDDTGLALARGLREAGHAAAASAQATRCAADAATPLALALAGIEMNHLGRFAEAEALLARAEA
GLGGDPNRYVVRFEQTIARYGQGRYRDAHRLFRELRDAPHRARVVETLYPGHGGSFDWAERKFLGHHDPVAGKRVLVMME
GGAGDLFMHSRYLACLREEGAASVDVQVAEAARGVLREDGFVRESGPHVGALADQCDCVTWLFNLFARYQTSPYQPRFDT
PYLDTPPPSALPEAVRAALEAPGLARVGLVWRSQSAVRHEPYRSLALDALAPLLAQPGCRFYSLQVGEAGQARGEAERAA
LAAHRVVDLAPALHRFADTAAVLGQLDLLISIDTGTAHLAAAMGRPVWLLLSHAGDSRWLDHVDFTPWYPSMRLFRQPVL
GDWRTPVAEAAAALGAGDHAGRAA

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45769; Mature: 45638

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDAALASAYLAYLHTPNDDTGLALARGLREAGHAAAASAQATRCAADAATPLALALAG
CCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHC
IEMNHLGRFAEAEALLARAEAGLGGDPNRYVVRFEQTIARYGQGRYRDAHRLFRELRDAP
CCHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHCCC
HRARVVETLYPGHGGSFDWAERKFLGHHDPVAGKRVLVMMEGGAGDLFMHSRYLACLREE
HHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHC
GAASVDVQVAEAARGVLREDGFVRESGPHVGALADQCDCVTWLFNLFARYQTSPYQPRFD
CCCEEEEEHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TPYLDTPPPSALPEAVRAALEAPGLARVGLVWRSQSAVRHEPYRSLALDALAPLLAQPGC
CCCCCCCCCHHHHHHHHHHHCCCCCEEEHEEECCCCHHHHCHHHHHHHHHHHHHHCCCCC
RFYSLQVGEAGQARGEAERAALAAHRVVDLAPALHRFADTAAVLGQLDLLISIDTGTAHL
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHH
AAAMGRPVWLLLSHAGDSRWLDHVDFTPWYPSMRLFRQPVLGDWRTPVAEAAAALGAGDH
HHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCC
AGRAA
CCCCC
>Mature Secondary Structure 
SDDAALASAYLAYLHTPNDDTGLALARGLREAGHAAAASAQATRCAADAATPLALALAG
CCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHC
IEMNHLGRFAEAEALLARAEAGLGGDPNRYVVRFEQTIARYGQGRYRDAHRLFRELRDAP
CCHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHCCC
HRARVVETLYPGHGGSFDWAERKFLGHHDPVAGKRVLVMMEGGAGDLFMHSRYLACLREE
HHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHC
GAASVDVQVAEAARGVLREDGFVRESGPHVGALADQCDCVTWLFNLFARYQTSPYQPRFD
CCCEEEEEHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TPYLDTPPPSALPEAVRAALEAPGLARVGLVWRSQSAVRHEPYRSLALDALAPLLAQPGC
CCCCCCCCCHHHHHHHHHHHCCCCCEEEHEEECCCCHHHHCHHHHHHHHHHHHHHCCCCC
RFYSLQVGEAGQARGEAERAALAAHRVVDLAPALHRFADTAAVLGQLDLLISIDTGTAHL
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHH
AAAMGRPVWLLLSHAGDSRWLDHVDFTPWYPSMRLFRQPVLGDWRTPVAEAAAALGAGDH
HHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCC
AGRAA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA