Click here to switch to the map view.

The map label for this gene is betI [H]

Identifier: 238024010

GI number: 238024010

Start: 677639

End: 678244

Strand: Reverse

Name: betI [H]

Synonym: bglu_2g05640

Alternate gene names: 238024010

Gene position: 678244-677639 (Counterclockwise)

Preceding gene: 238024025

Following gene: 238024009

Centisome position: 23.99

GC content: 74.59

Gene sequence:

>606_bases
ATGCCCAAACTCGGAATGCGCGAAGTGCGCCGCGCGCAGCTGATCGACGCGACGCTGCGCGCCATCGACGAAACCGGCCT
GCCCGGCACGACGCTCGCGTCGGTCGCGCAGCGCGCGAACATCTCGACGGGCATCGTGAGCCATTACTTCGGCGACAAGG
ACGGCCTGCTCGAGGCCACCATGCGCCACGTGCTGCGCGACCTGTGGGCCGCCACCGCGCGCCGCCGCGCCGCCGCGCGC
CGCGAGCCGCGCGCCCGGCTGCGTGCGATCGTGGCCGCGAACTTCGACGCCACGCAGGTCAGCACGCCCGTCATGAAGAC
CTGGCTCGCGTTCTGGTCGCAGAGCATGCATGCGCCGGCGCTCGGCCGGCTGCAGCGCGTAAACACGCGGCGGCTGCACT
CGAACCTGTGCGCCGAGTTCGCGCGGGCGCTGCCGCGCGAGCGCGCCCGCCACGCGGCGCTCGGCCTCGCCGCGCTGATC
GACGGGCTCTGGCTGCGCGGCGCGCTGGCCGGCGCGCCGGTCGACACGCGCTCGGCGCAGCGGCTCGCCAACGACTACAT
CGACCTGCAGCTCGCGCACGGCGCGGCTGGGGGCGCCACCGATTGA

Upstream 100 bases:

>100_bases
CCCCTTCCATTGGCCGCGCGTTGCTGCCCGAGCGATTATTGATTGAACGATCAATAAAAAACCGCTACCCTGCCTGCTTT
CCCGACCTCGCCGACGTGCC

Downstream 100 bases:

>100_bases
TCGATCAGGAGGATTGAATGACGGCTTATGGTCTGCAACGGCTTTACATCGGCGGCGGCTACGTCGACGCGACGAGCGGC
GCCACCTTCGACAGCCTCGA

Product: transcriptional regulator BetI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MPKLGMREVRRAQLIDATLRAIDETGLPGTTLASVAQRANISTGIVSHYFGDKDGLLEATMRHVLRDLWAATARRRAAAR
REPRARLRAIVAANFDATQVSTPVMKTWLAFWSQSMHAPALGRLQRVNTRRLHSNLCAEFARALPRERARHAALGLAALI
DGLWLRGALAGAPVDTRSAQRLANDYIDLQLAHGAAGGATD

Sequences:

>Translated_201_residues
MPKLGMREVRRAQLIDATLRAIDETGLPGTTLASVAQRANISTGIVSHYFGDKDGLLEATMRHVLRDLWAATARRRAAAR
REPRARLRAIVAANFDATQVSTPVMKTWLAFWSQSMHAPALGRLQRVNTRRLHSNLCAEFARALPRERARHAALGLAALI
DGLWLRGALAGAPVDTRSAQRLANDYIDLQLAHGAAGGATD
>Mature_200_residues
PKLGMREVRRAQLIDATLRAIDETGLPGTTLASVAQRANISTGIVSHYFGDKDGLLEATMRHVLRDLWAATARRRAAARR
EPRARLRAIVAANFDATQVSTPVMKTWLAFWSQSMHAPALGRLQRVNTRRLHSNLCAEFARALPRERARHAALGLAALID
GLWLRGALAGAPVDTRSAQRLANDYIDLQLAHGAAGGATD

Specific function: Repressor involved in choline regulation of the bet genes [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786505, Length=194, Percent_Identity=57.7319587628866, Blast_Score=214, Evalue=4e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR017757
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21917; Mature: 21786

Theoretical pI: Translated: 11.90; Mature: 11.90

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLGMREVRRAQLIDATLRAIDETGLPGTTLASVAQRANISTGIVSHYFGDKDGLLEAT
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHH
MRHVLRDLWAATARRRAAARREPRARLRAIVAANFDATQVSTPVMKTWLAFWSQSMHAPA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHH
LGRLQRVNTRRLHSNLCAEFARALPRERARHAALGLAALIDGLWLRGALAGAPVDTRSAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RLANDYIDLQLAHGAAGGATD
HHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PKLGMREVRRAQLIDATLRAIDETGLPGTTLASVAQRANISTGIVSHYFGDKDGLLEAT
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHH
MRHVLRDLWAATARRRAAARREPRARLRAIVAANFDATQVSTPVMKTWLAFWSQSMHAPA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHH
LGRLQRVNTRRLHSNLCAEFARALPRERARHAALGLAALIDGLWLRGALAGAPVDTRSAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RLANDYIDLQLAHGAAGGATD
HHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA