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The map label for this gene is yadH [H]

Identifier: 238024005

GI number: 238024005

Start: 671427

End: 672191

Strand: Reverse

Name: yadH [H]

Synonym: bglu_2g05590

Alternate gene names: 238024005

Gene position: 672191-671427 (Counterclockwise)

Preceding gene: 238024006

Following gene: 238024004

Centisome position: 23.77

GC content: 63.4

Gene sequence:

>765_bases
ATGTTCAACCTGCACGCAGTTCGCGCGATCTACCGCGCGGAAATGGCCCGCACCTGGCGCACCCTGACCCAGAGCATCAT
CGCGCCGGTGATCTCCACCTCGCTCTACTTCGTCGTGTTCGGCTCGGCGATCGGCTCGCGCATCAGCGCCGTAAACGGCA
TCAGCTACGGGTCGTTCATCGTGCCGGGCCTCGTGATGCTGTCGCTGCTGTCGCAAAGCATCTCGAACGCCTCGTTCGGC
ATCTACTTCCCCCGCTTCACCGGCACCATCTACGAGATCCTCGCCGCGCCGGTCTCGTACTGGGAGATCGTGCTCGCCTA
TGTGGGCGCGGCCGCCACCAAGTCGGTGCTGGTCGGCTTCATCATCCTCGCCACCGCCAGCCTGTTCGTGCCGATGCACA
TCCTGCATCCGGTCTGGATGGTGCTGTTCCTGCTGCTCACCGCGATCACGTTCAGCCTGTTCGGCTTCGTGATCGGCATC
TGGGCCGACAGCTTCGAGAAGCTCTCGCTGGTGCCGCTGCTGATCGTCACGCCGCTCACGTTCCTCGGCGGCAGCTTCTA
TTCGGTGGACATGCTGCCGCCGTTCTGGCGCGTGGTCACGCTGTTCAATCCGATCGTCTACCTGGTGAGCGGCTTTCGCT
GGGCGTTCTTCGGGCTCGCCGACGTGCATATCGGCATCAGCCTCGCGATGACGGCGCTGTTCCTCGTCGTGCTGCTGTTC
GTGGTGGCGTGGATCTTCCGCACCGGCTACCGCCTCAAGAAATGA

Upstream 100 bases:

>100_bases
CTCGCAGAGCTCGCTCGAGGAAATCTTCGTGAGCCTCATCGACGGCGGCCGCCCCGCCCCGACGAGCGCCGCTTCCGCCT
GACCCGAGACAGGACCCCGC

Downstream 100 bases:

>100_bases
AGCACTGAAGGCGCATGCAAAGGCCGGCGCGGCGCCGGCCTGCCGCCTGCCGATGGCGTGCCTGTTCCAGCCCGATGCCG
GATTCGTTCTATGGCGACGA

Product: ABC transporter inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MFNLHAVRAIYRAEMARTWRTLTQSIIAPVISTSLYFVVFGSAIGSRISAVNGISYGSFIVPGLVMLSLLSQSISNASFG
IYFPRFTGTIYEILAAPVSYWEIVLAYVGAAATKSVLVGFIILATASLFVPMHILHPVWMVLFLLLTAITFSLFGFVIGI
WADSFEKLSLVPLLIVTPLTFLGGSFYSVDMLPPFWRVVTLFNPIVYLVSGFRWAFFGLADVHIGISLAMTALFLVVLLF
VVAWIFRTGYRLKK

Sequences:

>Translated_254_residues
MFNLHAVRAIYRAEMARTWRTLTQSIIAPVISTSLYFVVFGSAIGSRISAVNGISYGSFIVPGLVMLSLLSQSISNASFG
IYFPRFTGTIYEILAAPVSYWEIVLAYVGAAATKSVLVGFIILATASLFVPMHILHPVWMVLFLLLTAITFSLFGFVIGI
WADSFEKLSLVPLLIVTPLTFLGGSFYSVDMLPPFWRVVTLFNPIVYLVSGFRWAFFGLADVHIGISLAMTALFLVVLLF
VVAWIFRTGYRLKK
>Mature_254_residues
MFNLHAVRAIYRAEMARTWRTLTQSIIAPVISTSLYFVVFGSAIGSRISAVNGISYGSFIVPGLVMLSLLSQSISNASFG
IYFPRFTGTIYEILAAPVSYWEIVLAYVGAAATKSVLVGFIILATASLFVPMHILHPVWMVLFLLLTAITFSLFGFVIGI
WADSFEKLSLVPLLIVTPLTFLGGSFYSVDMLPPFWRVVTLFNPIVYLVSGFRWAFFGLADVHIGISLAMTALFLVVLLF
VVAWIFRTGYRLKK

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=249, Percent_Identity=38.9558232931727, Blast_Score=192, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28133; Mature: 28133

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]