| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is pgl [H]
Identifier: 238024003
GI number: 238024003
Start: 668407
End: 669477
Strand: Reverse
Name: pgl [H]
Synonym: bglu_2g05570
Alternate gene names: 238024003
Gene position: 669477-668407 (Counterclockwise)
Preceding gene: 238024004
Following gene: 238024002
Centisome position: 23.68
GC content: 72.83
Gene sequence:
>1071_bases ATGAGCACTCCGCTGTCCGCCTCCCACGTCGTCTACGTCTCGAACTCCGAGGACGGCGACCTTTCCGTCTACCATCTCGA CGCGGCGCAGGGCCGGCTCGAGCCGTTCGCCCGCACGCCGGCCGGCAGCGTGGTGATGCCGCAGGCGCCCACGCAGGACG GCCTGCGTCTGTACGTGGCCACGCGCGGCACCGAGCCGGCCATCGTCGCCTACGAGATCGGCGCACAAGGCGCGCTGACG CAGCGCTTCTCGACGCCGATCGACGCAAGCCTCGCCTACCTGTCGGTCGACCACGCCGGGCGCCTGCTGTTCGGCGCGTC CTACGGCGGCAGCCGCCTGTTCGTGTTCGACGCAAACCGCCTCGCGCACGGCGACGGCACGCCGCTGCAGTTCATCGACC GGATTCAGAACGCGCACTCGATCATCGTCTCCGACGACGACCGCTATGCCTACGCGGCCTCGCTGGGCCTCGACCGGATC CTTTTCTACGGCATCGCGCGCGCCGGCGACGAGGCGGCGCTGATCGCGCGCGGCGAACTCGCGACGCCGGCCGGCTTCGG CCCGCGCCACCTGCGCCTCGCGCCGGACGGCGCGACGCTCTACGCGATCGGCGAATTCCACGGCACGGTACTCGCGATCG CACGCGATCCGGTGACGGGCGAGCTGGGCGAGGCGACCGTGTCGGACCTCGCGCCGAGCATCGCGCACCTGCCGCACGGC GCGCCGCGCCCGCCCGCGCCGACCGCGCCCTGCGTCTGGGCGGCCGACCTGCAGGTCTCGCCGGACGGCCGCCACGTCCA CGCGACCGAGCGCACCACCAGCCGCATCATCACGTTTCGCGTGGGCGAGCAGCGTGCGCTGCATTATGCGAGCTGCATCG AGACCGAGAAGCAGCCGCGCGGCATCCGCCTCTCGCCCGACGGCACGCTGCTGGCCGCGAGCGGCGAGCTCTCGCCGTTC ATCTCGCTGTACCGCGTCGATGCGGCGAGCGGCGCGCTGACGCCGGTGGCGCGCGTGGCGGGCGGCAAGGGCGCGAACTG GATCGAGATCCTGCCGCTCGGCAGCGCCTGA
Upstream 100 bases:
>100_bases CGTAACACTTACCCGGCCCCGTGCCGTCGTCCGCCCGCACCCGGCGCCTGCCCCGGCGACGCCGCGGCGCCCCCGCCTCA CGAACCGATCCGCGATCCCG
Downstream 100 bases:
>100_bases ACCGGCGACGCCGGCGCCGGCATCACGCGCCGCCGGCCCGGTTGCACCTGGCACGCACCACCGGCCTGGCGATACCGATG CCAGCCGGCGCCCCCGCCCC
Product: 3-carboxymuconate cyclase-like protein
Products: NA
Alternate protein names: 6-P-gluconolactonase [H]
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MSTPLSASHVVYVSNSEDGDLSVYHLDAAQGRLEPFARTPAGSVVMPQAPTQDGLRLYVATRGTEPAIVAYEIGAQGALT QRFSTPIDASLAYLSVDHAGRLLFGASYGGSRLFVFDANRLAHGDGTPLQFIDRIQNAHSIIVSDDDRYAYAASLGLDRI LFYGIARAGDEAALIARGELATPAGFGPRHLRLAPDGATLYAIGEFHGTVLAIARDPVTGELGEATVSDLAPSIAHLPHG APRPPAPTAPCVWAADLQVSPDGRHVHATERTTSRIITFRVGEQRALHYASCIETEKQPRGIRLSPDGTLLAASGELSPF ISLYRVDAASGALTPVARVAGGKGANWIEILPLGSA
Sequences:
>Translated_356_residues MSTPLSASHVVYVSNSEDGDLSVYHLDAAQGRLEPFARTPAGSVVMPQAPTQDGLRLYVATRGTEPAIVAYEIGAQGALT QRFSTPIDASLAYLSVDHAGRLLFGASYGGSRLFVFDANRLAHGDGTPLQFIDRIQNAHSIIVSDDDRYAYAASLGLDRI LFYGIARAGDEAALIARGELATPAGFGPRHLRLAPDGATLYAIGEFHGTVLAIARDPVTGELGEATVSDLAPSIAHLPHG APRPPAPTAPCVWAADLQVSPDGRHVHATERTTSRIITFRVGEQRALHYASCIETEKQPRGIRLSPDGTLLAASGELSPF ISLYRVDAASGALTPVARVAGGKGANWIEILPLGSA >Mature_355_residues STPLSASHVVYVSNSEDGDLSVYHLDAAQGRLEPFARTPAGSVVMPQAPTQDGLRLYVATRGTEPAIVAYEIGAQGALTQ RFSTPIDASLAYLSVDHAGRLLFGASYGGSRLFVFDANRLAHGDGTPLQFIDRIQNAHSIIVSDDDRYAYAASLGLDRIL FYGIARAGDEAALIARGELATPAGFGPRHLRLAPDGATLYAIGEFHGTVLAIARDPVTGELGEATVSDLAPSIAHLPHGA PRPPAPTAPCVWAADLQVSPDGRHVHATERTTSRIITFRVGEQRALHYASCIETEKQPRGIRLSPDGTLLAASGELSPFI SLYRVDAASGALTPVARVAGGKGANWIEILPLGSA
Specific function: Catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate [H]
COG id: COG2706
COG function: function code G; 3-carboxymuconate cyclase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cycloisomerase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1786983, Length=348, Percent_Identity=29.5977011494253, Blast_Score=133, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022528 - InterPro: IPR019405 - InterPro: IPR011045 - InterPro: IPR015943 [H]
Pfam domain/function: PF10282 DUF2394 [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 37489; Mature: 37357
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPLSASHVVYVSNSEDGDLSVYHLDAAQGRLEPFARTPAGSVVMPQAPTQDGLRLYVA CCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCHHHCCCCCCEEECCCCCCCCCEEEEE TRGTEPAIVAYEIGAQGALTQRFSTPIDASLAYLSVDHAGRLLFGASYGGSRLFVFDANR ECCCCCEEEEEEECCCCCCHHHCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCE LAHGDGTPLQFIDRIQNAHSIIVSDDDRYAYAASLGLDRILFYGIARAGDEAALIARGEL EECCCCCHHHHHHHHCCCCEEEEECCCCEEEEECCCHHHHHHHHHHCCCCCEEEEECCCC ATPAGFGPRHLRLAPDGATLYAIGEFHGTVLAIARDPVTGELGEATVSDLAPSIAHLPHG CCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHCHHHHHCCCC APRPPAPTAPCVWAADLQVSPDGRHVHATERTTSRIITFRVGEQRALHYASCIETEKQPR CCCCCCCCCCEEEEEEEEECCCCCEEEECCCCCEEEEEEEECCHHHHHHHHHHCCCCCCC GIRLSPDGTLLAASGELSPFISLYRVDAASGALTPVARVAGGKGANWIEILPLGSA CEEECCCCCEEEECCCCCCCEEEEEEECCCCCCCHHHHHCCCCCCCEEEEEECCCC >Mature Secondary Structure STPLSASHVVYVSNSEDGDLSVYHLDAAQGRLEPFARTPAGSVVMPQAPTQDGLRLYVA CCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCHHHCCCCCCEEECCCCCCCCCEEEEE TRGTEPAIVAYEIGAQGALTQRFSTPIDASLAYLSVDHAGRLLFGASYGGSRLFVFDANR ECCCCCEEEEEEECCCCCCHHHCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCE LAHGDGTPLQFIDRIQNAHSIIVSDDDRYAYAASLGLDRILFYGIARAGDEAALIARGEL EECCCCCHHHHHHHHCCCCEEEEECCCCEEEEECCCHHHHHHHHHHCCCCCEEEEECCCC ATPAGFGPRHLRLAPDGATLYAIGEFHGTVLAIARDPVTGELGEATVSDLAPSIAHLPHG CCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHCHHHHHCCCC APRPPAPTAPCVWAADLQVSPDGRHVHATERTTSRIITFRVGEQRALHYASCIETEKQPR CCCCCCCCCCEEEEEEEEECCCCCEEEECCCCCEEEEEEEECCHHHHHHHHHHCCCCCCC GIRLSPDGTLLAASGELSPFISLYRVDAASGALTPVARVAGGKGANWIEILPLGSA CEEECCCCCEEEECCCCCCCEEEEEEECCCCCCCHHHHHCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA