Click here to switch to the map view.

The map label for this gene is ocd2 [H]

Identifier: 238024000

GI number: 238024000

Start: 663669

End: 664640

Strand: Direct

Name: ocd2 [H]

Synonym: bglu_2g05540

Alternate gene names: 238024000

Gene position: 663669-664640 (Clockwise)

Preceding gene: 238023999

Following gene: 238024001

Centisome position: 23.47

GC content: 73.56

Gene sequence:

>972_bases
ATGAGAAACGATGCCGAACTGGTGCTGCTCGACAAGAACGTGGTGGAAGGGCTGCTGGCTCCGGACGACGTGCTGGATGC
CGTGGCCGCGGCGTTCGACCTGCACCGGCGCGGCGAGGGCCGCGTGTTTCCGGTGATTCGCGAGCCGCTGGCCACGGGCG
GCGTGTTCGGCATCAAGGCCGGCGACGTGCAGGGCGAGGCGCTGCTCGGCTTCAAGGCGGCCGGCTTCTGGCCGGCGAAT
CGCGGCCTTGGCGGCGAGCCGCATCAGGCCACCGTGATGCTGGTCGATCCGGCCACCGGGCGCCCGCGCTGCCTGATCGA
CGGCAACGCCATCACCACCATGCGCACCGGTGCCGCCGGCGGCCTCGGCCTGCGCGCGCTGGCGCGGCCCGACAGCCGGC
GCGTCGCGCTGTTCGGCAGCGGCGTACAGGCGCGCGTGCAGCTGGATTTCGCGCTGCGCATGCTGCCCTCGCTCGACACG
GTGCAGTACCTGACGGCCCGCGGCGAGGCCGATCCGGCCTTCGAGGCGCGGTTTTGCGAGCGCTGTGCGATCTCGCACGC
GCGCGACGCGGACGCGGCGGTGGCCGCCAGCGACGTCGTAATCACGGCGACGCCGGGCGGCGGTGCGCTGTTCGCGGCCG
GCGCGGTGCGGCCGGGCACGCACGTCAACGCGGTCGGTGCCGATACCAGGGGTAAGCGCGAGTTGCCGGCGGGGCTGCTC
GAACGCGCTCGGCTGGTGGTCGACGATCGCGTCCAGGCGCGCCAGATCGGCGAGGCGCAATGGGCGCCGCAGCTCGACTG
CGTCGAACTCGGCGAACTGCTGGCCGCGCCGCGGTGCCCCGCACGCGGCCCCGACGAGATCACCGTGTTCGATATGACGG
GCCTCGCGTTGCAGGACCTGACGGTGGCGCGCATGCTGTTCGAGCGGGCCGGGGCGGCGCGGCTCGGCATGCGGGTGGCC
TGGCCGTGGTGA

Upstream 100 bases:

>100_bases
TTGGAAAAAATGTACACTATCGGCCAGCCTCGCACGCCGGCCGGCCGAATCGCGCCGACGTGACGCGGGTTTCGAAACCG
CTCACGACCACGGAACGACG

Downstream 100 bases:

>100_bases
AGGTGAGGGGGCTGGCTCGCGCGCGGGCCCAGCGCGGCAAACGGCAGGCGCCGTGCCGGCTGCGAAGGATCGCACGGCTG
CCTCCGACGGCGTGCCGTCC

Product: Ornithine cyclodeaminase/mu-crystallin

Products: NA

Alternate protein names: OCD 2 [H]

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MRNDAELVLLDKNVVEGLLAPDDVLDAVAAAFDLHRRGEGRVFPVIREPLATGGVFGIKAGDVQGEALLGFKAAGFWPAN
RGLGGEPHQATVMLVDPATGRPRCLIDGNAITTMRTGAAGGLGLRALARPDSRRVALFGSGVQARVQLDFALRMLPSLDT
VQYLTARGEADPAFEARFCERCAISHARDADAAVAASDVVITATPGGGALFAAGAVRPGTHVNAVGADTRGKRELPAGLL
ERARLVVDDRVQARQIGEAQWAPQLDCVELGELLAAPRCPARGPDEITVFDMTGLALQDLTVARMLFERAGAARLGMRVA
WPW

Sequences:

>Translated_323_residues
MRNDAELVLLDKNVVEGLLAPDDVLDAVAAAFDLHRRGEGRVFPVIREPLATGGVFGIKAGDVQGEALLGFKAAGFWPAN
RGLGGEPHQATVMLVDPATGRPRCLIDGNAITTMRTGAAGGLGLRALARPDSRRVALFGSGVQARVQLDFALRMLPSLDT
VQYLTARGEADPAFEARFCERCAISHARDADAAVAASDVVITATPGGGALFAAGAVRPGTHVNAVGADTRGKRELPAGLL
ERARLVVDDRVQARQIGEAQWAPQLDCVELGELLAAPRCPARGPDEITVFDMTGLALQDLTVARMLFERAGAARLGMRVA
WPW
>Mature_323_residues
MRNDAELVLLDKNVVEGLLAPDDVLDAVAAAFDLHRRGEGRVFPVIREPLATGGVFGIKAGDVQGEALLGFKAAGFWPAN
RGLGGEPHQATVMLVDPATGRPRCLIDGNAITTMRTGAAGGLGLRALARPDSRRVALFGSGVQARVQLDFALRMLPSLDT
VQYLTARGEADPAFEARFCERCAISHARDADAAVAASDVVITATPGGGALFAAGAVRPGTHVNAVGADTRGKRELPAGLL
ERARLVVDDRVQARQIGEAQWAPQLDCVELGELLAAPRCPARGPDEITVFDMTGLALQDLTVARMLFERAGAARLGMRVA
WPW

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI4503065, Length=270, Percent_Identity=29.2592592592593, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI62241008, Length=270, Percent_Identity=29.2592592592593, Blast_Score=100, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 34098; Mature: 34098

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNDAELVLLDKNVVEGLLAPDDVLDAVAAAFDLHRRGEGRVFPVIREPLATGGVFGIKA
CCCCCEEEEEECHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCEEEEEC
GDVQGEALLGFKAAGFWPANRGLGGEPHQATVMLVDPATGRPRCLIDGNAITTMRTGAAG
CCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCEEEEEECCCCC
GLGLRALARPDSRRVALFGSGVQARVQLDFALRMLPSLDTVQYLTARGEADPAFEARFCE
CCCCHHHCCCCCCEEEEEECCCEEEEEEEEHHHHCCCCCHHHHHHHCCCCCCHHHHHHHH
RCAISHARDADAAVAASDVVITATPGGGALFAAGAVRPGTHVNAVGADTRGKRELPAGLL
HHHHCCCCCCCCCEEECCEEEEECCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCHHHH
ERARLVVDDRVQARQIGEAQWAPQLDCVELGELLAAPRCPARGPDEITVFDMTGLALQDL
HHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHH
TVARMLFERAGAARLGMRVAWPW
HHHHHHHHHCCHHHHCEEEECCC
>Mature Secondary Structure
MRNDAELVLLDKNVVEGLLAPDDVLDAVAAAFDLHRRGEGRVFPVIREPLATGGVFGIKA
CCCCCEEEEEECHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCEEEEEC
GDVQGEALLGFKAAGFWPANRGLGGEPHQATVMLVDPATGRPRCLIDGNAITTMRTGAAG
CCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCEEEEEECCCCC
GLGLRALARPDSRRVALFGSGVQARVQLDFALRMLPSLDTVQYLTARGEADPAFEARFCE
CCCCHHHCCCCCCEEEEEECCCEEEEEEEEHHHHCCCCCHHHHHHHCCCCCCHHHHHHHH
RCAISHARDADAAVAASDVVITATPGGGALFAAGAVRPGTHVNAVGADTRGKRELPAGLL
HHHHCCCCCCCCCEEECCEEEEECCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCHHHH
ERARLVVDDRVQARQIGEAQWAPQLDCVELGELLAAPRCPARGPDEITVFDMTGLALQDL
HHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHH
TVARMLFERAGAARLGMRVAWPW
HHHHHHHHHCCHHHHCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]