Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238023992

Identifier: 238023992

GI number: 238023992

Start: 654988

End: 656931

Strand: Direct

Name: 238023992

Synonym: bglu_2g05460

Alternate gene names: NA

Gene position: 654988-656931 (Clockwise)

Preceding gene: 238023991

Following gene: 238023995

Centisome position: 23.17

GC content: 59.72

Gene sequence:

>1944_bases
ATGTCTCGACGTGCCCTTCTTGCCGCAGGAGGTGCGGTGGCCGGAATGGGTTTGGTTCCGCCTCTGATGCGCAGGAGCCT
GGCGGCAGCCGTGGCAACTGCTACGGCGAACTCTCCGCAATTCAACCTGGAGCAATTTGCCGAACTGCGCTTCGGGATGT
TCAACCACTTCAATATGGGAACATTCACCAACGAGGAGTGGGCGACCCCGAACCAGAATCCCATGACTTTCGCGCCGCCG
AGCGTGAACTGCGCCCAATGGGCCGCAGCCGCGAAATCGGCCAAGATGAGCTACGGCGTCTTGACCACCAAGCATCACGA
CGGTTTCTGCTTATGGCCTTCGAAATACAACAGTTACAACGTTGCCAACAGCGGGTATCGGCACGACATCGTCAGTCAGT
ACGTCACCGCATTCCGCGAGGCCGGACTCAAGGTCGGCCTGTATTTTTCGATATGGGATCGCACCTACCCGGTGCAGGCC
TACGGCGGACACGTCAGCGACACGACCCAGGCAATCCAGCCGTCGAACATCACTTACATCCTCAATCAGATCCGCGAGTT
GCTGACGAATTACGGGCAGATCGATATCTGGGTGAATGATGGGTATGCCTGGCAGATGGGCCAGCAGCAGGTGCCGTATC
AGCAGGTACGAGAACTCGTCAAATCCCTGCAGCCGAACATCATCATGATCGACCACGGCGCATTGACCGTTCCGTTCCTT
GGCGATGCCATCTACTTCGAGGAGCCGATGGGCGTGACGTCGCCGGCCAACAACACCTATGCGTCGGCGCAGGGAACGAC
CATCACGCCTGCCGGTTGGTTCTGGCATCCGCAGGACCCGACTACGGACCCGATGAGCCAGGCCGACATCGTCAACCATC
TCACCACTCTGGAGCCGCGATGGACGTCATTCCTGTTGAACTGTCCGCCGAACCGCTCCGGCCTGCTCGACGATAATATC
GTCACCAGGCTTCAAGAAGTGGGGGCCGCCTGGTCGCCCAACTCCAGTCGTCCCAAGCTTCCCACCCAGCCCAATCGATG
CGAGCATCCCGTCACGCCGGTGGCTGCCTATGCGAGTGCCTGGCACAGCGGGGAAGGTCCGATGCGCGCGATCGACGGCT
ATTCCGACAAGGACGCCGAAACCTGCTGGTCGACCTGGTCCAGTGACGGCAGTCTCACCCTGCCGCAGTCGATCACGATA
GATCTCGGCGGCACGTATAGCGGCATTGGCGCCTTGGAGTATCTGCCCAAGCAGTTCAATCGCAACAACTCGACCGACGG
CGACATTACCTCGTTCCGGATTCTCACCAGCACCGACGGCGTCAGCTTCACCCAGGTCGCATCCGGAAACTGGGATGCCG
ACCACACCATGAAATATGTCGAATGGCCGGCTGCCAATGCCGCCTATGTGCGGATAGAAGCGCAGGCGGGAACGGGCGGC
TACTGCAACATCAATAATCTACGAGTCGGCGGCCGGACAACGAAGCCGGCACTCGTGGCCGACACCACCTTCCCGGTTGC
GAACAAGCAATACAGGATCATCAACGCCAACAGCATGAAGGCGCTGGATGTGGGCGATGGGCAGGTCTCGAACGCCACGC
CGGTCGTGCAGAACCCGGTCGCTTCCTCGCCGACGCAGTACTGGACGTTCGAGCGCGACGTCAGCGGTTACTTCAAGATT
CGCAACGTGTCGTCCAACAAGCTGCTGGAGATTGGCAACCTGTCCAGGGCGAACAATGCCGTGGCTCAGGTATGGGATGA
CGCGACCGCTCCGCAGCAGGAGTGGTCCGTGACTCGCCTCAGCAGTGCCAACTTCATGCTGTTGAACCGCTTGAGTTTCC
TGTCGCTGAACGTGAAGGATGGTTCCCCCAGCACCGGAGCGACCGTCAATCAGTACGAGTTCAATCAAGCCGCTCAGGAA
ATGTGGCAGATCTCGGCCGTATAG

Upstream 100 bases:

>100_bases
CATGCCGGCAGGCGCCGGCCTTCGACGTTCCGCACCACATTGGTAACGGCAATATCAAATCGAAAAAATTTCGAGGAAAG
AGAGAATGAATAATTTCAAA

Downstream 100 bases:

>100_bases
GTCGAGCGCCATGCCGCACGAGCGCTCGACACGTCCTGTCCGCTCATGAGGCTAGGGCTCGGGCAATCTGATTCCCACCA
GCCGTAACGGGAATCAGATT

Product: alpha-L-fucosidase

Products: NA

Alternate protein names: Glycoside Hydrolase Family; Coagulation Factor 5/8 Type Domain Protein; Glycosyl Hydrolase; Alpha-1 3/4-Fucosidase; Calx-Beta Domain-Containing Protein; Ricin B Lectin; Alpha-L-Fucosidase Protein; Lipoprotein; Exporte Hydrolase; Alpha-N-Arabinofuranosidase; Alpha-L-Fucosidase Family Protein; Exported Fucosidase; Coagulation Factor 5/8 Type Domain-Containing Protein; Alpha-L-Fucosidase-Like Protein; Glycoside Hydrolase Family Alpha-L-Fucosidase; Ig Domain-Containing; Twin-Arginine Translocation Pathway Signal; QXW Lectin Repeat-Containing Protein; Exported Alpha-L-Fucosidase Protein; Fucosidase; Glycosyl Hydrolase Alpha-L-Fucosidase; DS Domain-Containing Protein; Glycoside Hydrolase

Number of amino acids: Translated: 647; Mature: 646

Protein sequence:

>647_residues
MSRRALLAAGGAVAGMGLVPPLMRRSLAAAVATATANSPQFNLEQFAELRFGMFNHFNMGTFTNEEWATPNQNPMTFAPP
SVNCAQWAAAAKSAKMSYGVLTTKHHDGFCLWPSKYNSYNVANSGYRHDIVSQYVTAFREAGLKVGLYFSIWDRTYPVQA
YGGHVSDTTQAIQPSNITYILNQIRELLTNYGQIDIWVNDGYAWQMGQQQVPYQQVRELVKSLQPNIIMIDHGALTVPFL
GDAIYFEEPMGVTSPANNTYASAQGTTITPAGWFWHPQDPTTDPMSQADIVNHLTTLEPRWTSFLLNCPPNRSGLLDDNI
VTRLQEVGAAWSPNSSRPKLPTQPNRCEHPVTPVAAYASAWHSGEGPMRAIDGYSDKDAETCWSTWSSDGSLTLPQSITI
DLGGTYSGIGALEYLPKQFNRNNSTDGDITSFRILTSTDGVSFTQVASGNWDADHTMKYVEWPAANAAYVRIEAQAGTGG
YCNINNLRVGGRTTKPALVADTTFPVANKQYRIINANSMKALDVGDGQVSNATPVVQNPVASSPTQYWTFERDVSGYFKI
RNVSSNKLLEIGNLSRANNAVAQVWDDATAPQQEWSVTRLSSANFMLLNRLSFLSLNVKDGSPSTGATVNQYEFNQAAQE
MWQISAV

Sequences:

>Translated_647_residues
MSRRALLAAGGAVAGMGLVPPLMRRSLAAAVATATANSPQFNLEQFAELRFGMFNHFNMGTFTNEEWATPNQNPMTFAPP
SVNCAQWAAAAKSAKMSYGVLTTKHHDGFCLWPSKYNSYNVANSGYRHDIVSQYVTAFREAGLKVGLYFSIWDRTYPVQA
YGGHVSDTTQAIQPSNITYILNQIRELLTNYGQIDIWVNDGYAWQMGQQQVPYQQVRELVKSLQPNIIMIDHGALTVPFL
GDAIYFEEPMGVTSPANNTYASAQGTTITPAGWFWHPQDPTTDPMSQADIVNHLTTLEPRWTSFLLNCPPNRSGLLDDNI
VTRLQEVGAAWSPNSSRPKLPTQPNRCEHPVTPVAAYASAWHSGEGPMRAIDGYSDKDAETCWSTWSSDGSLTLPQSITI
DLGGTYSGIGALEYLPKQFNRNNSTDGDITSFRILTSTDGVSFTQVASGNWDADHTMKYVEWPAANAAYVRIEAQAGTGG
YCNINNLRVGGRTTKPALVADTTFPVANKQYRIINANSMKALDVGDGQVSNATPVVQNPVASSPTQYWTFERDVSGYFKI
RNVSSNKLLEIGNLSRANNAVAQVWDDATAPQQEWSVTRLSSANFMLLNRLSFLSLNVKDGSPSTGATVNQYEFNQAAQE
MWQISAV
>Mature_646_residues
SRRALLAAGGAVAGMGLVPPLMRRSLAAAVATATANSPQFNLEQFAELRFGMFNHFNMGTFTNEEWATPNQNPMTFAPPS
VNCAQWAAAAKSAKMSYGVLTTKHHDGFCLWPSKYNSYNVANSGYRHDIVSQYVTAFREAGLKVGLYFSIWDRTYPVQAY
GGHVSDTTQAIQPSNITYILNQIRELLTNYGQIDIWVNDGYAWQMGQQQVPYQQVRELVKSLQPNIIMIDHGALTVPFLG
DAIYFEEPMGVTSPANNTYASAQGTTITPAGWFWHPQDPTTDPMSQADIVNHLTTLEPRWTSFLLNCPPNRSGLLDDNIV
TRLQEVGAAWSPNSSRPKLPTQPNRCEHPVTPVAAYASAWHSGEGPMRAIDGYSDKDAETCWSTWSSDGSLTLPQSITID
LGGTYSGIGALEYLPKQFNRNNSTDGDITSFRILTSTDGVSFTQVASGNWDADHTMKYVEWPAANAAYVRIEAQAGTGGY
CNINNLRVGGRTTKPALVADTTFPVANKQYRIINANSMKALDVGDGQVSNATPVVQNPVASSPTQYWTFERDVSGYFKIR
NVSSNKLLEIGNLSRANNAVAQVWDDATAPQQEWSVTRLSSANFMLLNRLSFLSLNVKDGSPSTGATVNQYEFNQAAQEM
WQISAV

Specific function: Unknown

COG id: COG3669

COG function: function code G; Alpha-L-fucosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI24662717, Length=100, Percent_Identity=41, Blast_Score=67, Evalue=4e-11,
Organism=Drosophila melanogaster, GI78706642, Length=100, Percent_Identity=41, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71025; Mature: 70894

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: PS50022 FA58C_3 ; PS50231 RICIN_B_LECTIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRALLAAGGAVAGMGLVPPLMRRSLAAAVATATANSPQFNLEQFAELRFGMFNHFNMG
CCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC
TFTNEEWATPNQNPMTFAPPSVNCAQWAAAAKSAKMSYGVLTTKHHDGFCLWPSKYNSYN
CCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCEEECEEEEECCCCEEECCCCCCCCC
VANSGYRHDIVSQYVTAFREAGLKVGLYFSIWDRTYPVQAYGGHVSDTTQAIQPSNITYI
CCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCHHHH
LNQIRELLTNYGQIDIWVNDGYAWQMGQQQVPYQQVRELVKSLQPNIIMIDHGALTVPFL
HHHHHHHHHCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCEEECCC
GDAIYFEEPMGVTSPANNTYASAQGTTITPAGWFWHPQDPTTDPMSQADIVNHLTTLEPR
CCEEEEECCCCCCCCCCCCEECCCCCEECCCCCEECCCCCCCCCCHHHHHHHHHHCCCCC
WTSFLLNCPPNRSGLLDDNIVTRLQEVGAAWSPNSSRPKLPTQPNRCEHPVTPVAAYASA
HHEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
WHSGEGPMRAIDGYSDKDAETCWSTWSSDGSLTLPQSITIDLGGTYSGIGALEYLPKQFN
HHCCCCCCEEECCCCCCCHHHHHHHCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHC
RNNSTDGDITSFRILTSTDGVSFTQVASGNWDADHTMKYVEWPAANAAYVRIEAQAGTGG
CCCCCCCCEEEEEEEECCCCCEEEEEECCCCCHHHCEEEEECCCCCEEEEEEEEECCCCC
YCNINNLRVGGRTTKPALVADTTFPVANKQYRIINANSMKALDVGDGQVSNATPVVQNPV
EEECCCEEECCCCCCCEEEEECCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCC
ASSPTQYWTFERDVSGYFKIRNVSSNKLLEIGNLSRANNAVAQVWDDATAPQQEWSVTRL
CCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHCCCCCCHHHCCEEEE
SSANFMLLNRLSFLSLNVKDGSPSTGATVNQYEFNQAAQEMWQISAV
CCCCEEEEECEEEEEEEECCCCCCCCCEECHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRRALLAAGGAVAGMGLVPPLMRRSLAAAVATATANSPQFNLEQFAELRFGMFNHFNMG
CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC
TFTNEEWATPNQNPMTFAPPSVNCAQWAAAAKSAKMSYGVLTTKHHDGFCLWPSKYNSYN
CCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCEEECEEEEECCCCEEECCCCCCCCC
VANSGYRHDIVSQYVTAFREAGLKVGLYFSIWDRTYPVQAYGGHVSDTTQAIQPSNITYI
CCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCHHHH
LNQIRELLTNYGQIDIWVNDGYAWQMGQQQVPYQQVRELVKSLQPNIIMIDHGALTVPFL
HHHHHHHHHCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCEEECCC
GDAIYFEEPMGVTSPANNTYASAQGTTITPAGWFWHPQDPTTDPMSQADIVNHLTTLEPR
CCEEEEECCCCCCCCCCCCEECCCCCEECCCCCEECCCCCCCCCCHHHHHHHHHHCCCCC
WTSFLLNCPPNRSGLLDDNIVTRLQEVGAAWSPNSSRPKLPTQPNRCEHPVTPVAAYASA
HHEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
WHSGEGPMRAIDGYSDKDAETCWSTWSSDGSLTLPQSITIDLGGTYSGIGALEYLPKQFN
HHCCCCCCEEECCCCCCCHHHHHHHCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHC
RNNSTDGDITSFRILTSTDGVSFTQVASGNWDADHTMKYVEWPAANAAYVRIEAQAGTGG
CCCCCCCCEEEEEEEECCCCCEEEEEECCCCCHHHCEEEEECCCCCEEEEEEEEECCCCC
YCNINNLRVGGRTTKPALVADTTFPVANKQYRIINANSMKALDVGDGQVSNATPVVQNPV
EEECCCEEECCCCCCCEEEEECCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCC
ASSPTQYWTFERDVSGYFKIRNVSSNKLLEIGNLSRANNAVAQVWDDATAPQQEWSVTRL
CCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHCCCCCCHHHCCEEEE
SSANFMLLNRLSFLSLNVKDGSPSTGATVNQYEFNQAAQEMWQISAV
CCCCEEEEECEEEEEEEECCCCCCCCCEECHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA