| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is cpo [H]
Identifier: 238023964
GI number: 238023964
Start: 617876
End: 618853
Strand: Direct
Name: cpo [H]
Synonym: bglu_2g05140
Alternate gene names: 238023964
Gene position: 617876-618853 (Clockwise)
Preceding gene: 238023963
Following gene: 238023965
Centisome position: 21.85
GC content: 71.57
Gene sequence:
>978_bases ATGACGACCCAGTACAGCCTCATGACGCGCCGCCGCCTGCTCTCGGCCGGCGCGGGCGTGGCCGGCGCGATGGCGGCGAT GTCGAGCCTGCCTGCCGCCGCCGGCACGGCCACGGCGCCCCACGCCCAGGCGCACGCCAAGGGCCGCCCGGACGGCGGCG GCTACGTGGCGGCCAAGGACGGCACGCCGATCTACTACAAGGACTGGGGCAGCGGCACGCCGGTGGTGTTCTCGCATGGC TGGCCGCTGTCGGCCGACGCCTGGGACGCGCAGATGCTGTGCCTCGTCAACCAGGGCTGCCGCGTGATCGCGCACGACCG GCGCGGCCACGGCCGCTCGGGCCAGCCGTCGGCGGGCAACGACATGGACAGCTACGCCGACGATCTGGCCGCCGTGCTCG ACGCGCTCGACGTGCATGGCGCGATGCTGGTCGGCCATTCGACGGGCGGCGGCGAGGTGGCGCACTACCTGGGCCGCCAC GGCGAGGCGCGCGTCGCGAAGGCCGTGCTGATCGGCGCGGTGCCGCCGCGGATGCTGCAGTCGGCCGCCAACCCGGGCGG GCTGCCGATGTCGGTGTTCGACGGCATCCGGGCCGGCGTGGCCGCGAACCGTTCGCAGTTCTACCTGGATCTCGCCACGC CGTTCTACGGCTTCAACCGGCCCGGCGCGAAGCTCTCGCAGGGGCTCGTGCAGGACTTCTGGCGCCAGGGCATGGCCGGC TCGATCAAAGGCCAGTACGAGTGCATCAAGCAGTTCTCGGAAGTGGACTACACCGAGGACCTGAAGAAGATCGGCGTGCC CACGCTGATCCTGCACGGCGACGACGACCAGATCGTGCCGATCGACGATTCGGCGCGCCTGTCGGCCAGGCTGGTGCGCC ATGCCACGCTGAAGGTCTATGCCGGCGCGCCGCACGGCATGTGCAGCACCCACGTGGATCAGGTCAACGCCGACCTGCTG GCGTTCCTGAAGGGCTGA
Upstream 100 bases:
>100_bases CGCGCAACACGCGCGGGCGGCCCGCCCGGCGGCGATCCCATCCAGCACGACGCCAACCGCTCGCCCGGCCGGTCCGCGGC GAGGTATCGAAGGAGAAGAG
Downstream 100 bases:
>100_bases CGGGCCGCCGGGCGCGGGTAGTACGCGCCGTCCGCCGTCGCGCGAGGCCGCCCGGCCCGGTTGGGGCCGGGCGTTTTTTC GTGCGCCGTGCGGCCGGTGC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Chloride peroxidase; Chloroperoxidase F; CPO-F [H]
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MTTQYSLMTRRRLLSAGAGVAGAMAAMSSLPAAAGTATAPHAQAHAKGRPDGGGYVAAKDGTPIYYKDWGSGTPVVFSHG WPLSADAWDAQMLCLVNQGCRVIAHDRRGHGRSGQPSAGNDMDSYADDLAAVLDALDVHGAMLVGHSTGGGEVAHYLGRH GEARVAKAVLIGAVPPRMLQSAANPGGLPMSVFDGIRAGVAANRSQFYLDLATPFYGFNRPGAKLSQGLVQDFWRQGMAG SIKGQYECIKQFSEVDYTEDLKKIGVPTLILHGDDDQIVPIDDSARLSARLVRHATLKVYAGAPHGMCSTHVDQVNADLL AFLKG
Sequences:
>Translated_325_residues MTTQYSLMTRRRLLSAGAGVAGAMAAMSSLPAAAGTATAPHAQAHAKGRPDGGGYVAAKDGTPIYYKDWGSGTPVVFSHG WPLSADAWDAQMLCLVNQGCRVIAHDRRGHGRSGQPSAGNDMDSYADDLAAVLDALDVHGAMLVGHSTGGGEVAHYLGRH GEARVAKAVLIGAVPPRMLQSAANPGGLPMSVFDGIRAGVAANRSQFYLDLATPFYGFNRPGAKLSQGLVQDFWRQGMAG SIKGQYECIKQFSEVDYTEDLKKIGVPTLILHGDDDQIVPIDDSARLSARLVRHATLKVYAGAPHGMCSTHVDQVNADLL AFLKG >Mature_324_residues TTQYSLMTRRRLLSAGAGVAGAMAAMSSLPAAAGTATAPHAQAHAKGRPDGGGYVAAKDGTPIYYKDWGSGTPVVFSHGW PLSADAWDAQMLCLVNQGCRVIAHDRRGHGRSGQPSAGNDMDSYADDLAAVLDALDVHGAMLVGHSTGGGEVAHYLGRHG EARVAKAVLIGAVPPRMLQSAANPGGLPMSVFDGIRAGVAANRSQFYLDLATPFYGFNRPGAKLSQGLVQDFWRQGMAGS IKGQYECIKQFSEVDYTEDLKKIGVPTLILHGDDDQIVPIDDSARLSARLVRHATLKVYAGAPHGMCSTHVDQVNADLLA FLKG
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial non-heme bromo- and chloro- peroxidases family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =1.11.1.10 [H]
Molecular weight: Translated: 34223; Mature: 34092
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQYSLMTRRRLLSAGAGVAGAMAAMSSLPAAAGTATAPHAQAHAKGRPDGGGYVAAKD CCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCEEEECC GTPIYYKDWGSGTPVVFSHGWPLSADAWDAQMLCLVNQGCRVIAHDRRGHGRSGQPSAGN CCEEEEEECCCCCCEEEECCCCCCCCCCCHHHHEECCCCCEEEEECCCCCCCCCCCCCCC DMDSYADDLAAVLDALDVHGAMLVGHSTGGGEVAHYLGRHGEARVAKAVLIGAVPPRMLQ CHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHH SAANPGGLPMSVFDGIRAGVAANRSQFYLDLATPFYGFNRPGAKLSQGLVQDFWRQGMAG HCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCC SIKGQYECIKQFSEVDYTEDLKKIGVPTLILHGDDDQIVPIDDSARLSARLVRHATLKVY CCCHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCCEEECCCCHHHHHHHHHHHEEEEE AGAPHGMCSTHVDQVNADLLAFLKG ECCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTQYSLMTRRRLLSAGAGVAGAMAAMSSLPAAAGTATAPHAQAHAKGRPDGGGYVAAKD CCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCEEEECC GTPIYYKDWGSGTPVVFSHGWPLSADAWDAQMLCLVNQGCRVIAHDRRGHGRSGQPSAGN CCEEEEEECCCCCCEEEECCCCCCCCCCCHHHHEECCCCCEEEEECCCCCCCCCCCCCCC DMDSYADDLAAVLDALDVHGAMLVGHSTGGGEVAHYLGRHGEARVAKAVLIGAVPPRMLQ CHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHH SAANPGGLPMSVFDGIRAGVAANRSQFYLDLATPFYGFNRPGAKLSQGLVQDFWRQGMAG HCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCC SIKGQYECIKQFSEVDYTEDLKKIGVPTLILHGDDDQIVPIDDSARLSARLVRHATLKVY CCCHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCCEEECCCCHHHHHHHHHHHEEEEE AGAPHGMCSTHVDQVNADLLAFLKG ECCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8760926; 9642069 [H]