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The map label for this gene is tcp [H]

Identifier: 238023908

GI number: 238023908

Start: 542027

End: 543949

Strand: Reverse

Name: tcp [H]

Synonym: bglu_2g04490

Alternate gene names: 238023908

Gene position: 543949-542027 (Counterclockwise)

Preceding gene: 238023909

Following gene: 238023907

Centisome position: 19.24

GC content: 65.94

Gene sequence:

>1923_bases
ATGCCTTCCTACTCGAATCTATCAATCCAGGCACGCTTCACGTTGATTATCGTGGCCGTCTTCATCGGGCTGCTGATCGC
AACGTTCGCCGTCATCCGTCTGGTGGTCACGCCGAATCTCGCCATTCTCGAGGGGCACGTCGTCTCCGGCGAGGTCGACG
AGATTTCCGTGCTCGTCAGCGAACAGCTGCGCAAGGTGGAAGCCCAGCAGCGCACCATCACCGAGACGGTTCCGCTGCTG
TCGAGCGACCAGATCGATACCCTGCTGCCGGTGCTGGTGAATCAATACGGCGACCCGAACGTCTTCGGCGGCGGTATCTG
GCCGCTGCCGAAAAAGCGCGATGCGACGCGCGACCGGTTCAGCACCTTCTACGCCCGCGATGCATCGGGTACGCTGGTGG
TCAACACGCACTGGAACCAGCCCGACTCCCTCAAGTACTGGGAGCAACCCTGGTACAAGAACGGCGAGGATGCGCCGAAA
GGCCATTGCCTCTGGGCCAAGGCGTATCAGGACGATGCGAGCCCGCAGCCGCGCACCAATTGCGCCATGGGCATCTACAA
GGACGGCCAGCTGTACGGCGTCGCCACCATCGACGTCACGCTGGGATTCTTCAACGGTCTCGTCTCGCAGATGGAGCAGA
AGATCCAAGGCCAGGTCCTGATCGTCGAGCGCGACGGCAAAATCGTCAGCAACAGCGCCGGCACGCCGGCGAACAGCATC
CTGAAGAATCTCTCCGAGATCCAGGCCGACAGCCCGATGGCCGCGGAAATCCTGCGCCAGCTGTCGCAGGGCAATATCGA
ACGCAGCGGCAAGTATCTGGCCGACGGCGTCTCTCGCACGCTGTTCCTGCAGCCGATTCCCGATAGCCCCTGGCTGATCG
CCACCAGCGTGCCGACCGCGTTGCTGATGAAAAACAGCACGCGGATCCTGCAGCAGCTGGCCGCCGTGCAGATTCCGCTG
GCCCTGGCCCTGCTGATCGTCGTGCTGCTCGGCATCCGGACGCTGATGAAGCGGCTCGGCATGCTGCGCGAGAAGATCGA
CGATCTCTCCTCGGGCGATGCCGACCTGACGCGCCGGTTGCCGGAGACGGGCGGCAAGGAATTCGCCGCGGTGGCGGCCA
GCCTGAACCGTTTCGTCGATCGCCTGCACGACATCGTGGTGCAGGTGGTGGCGGGCACGCAGTCGGTCACGCTCGGCGCG
CGCGAGATCGCGAACGGGAATCGCGATTTGTCGGCGCGCACGGAGCAGCAGGCCGCAGCGCTCGAGCAAAGCGCGGCAAG
CATGACCCAGCTGACCCAGACGGTGCGCCAGAACGCCGACAACGCCCGGCAGGCCAACACGCTGGCCAGCGGGGCGACCG
ACGTGGCCAATAACGGCAACGAGGCCGTCCAGGGCATGGTGCAGACGATCGACCGCATCAGCGACAGCTCGGGCCGGATC
TCCGAGATCACCGGCGTGATCGAGGGCATCGCGTTCCAGACCAACATCCTCGCGCTGAACGCGGCGGTGGAGGCCGCGCG
CGCCGGCGAACAGGGCCGGGGCTTCGCGGTGGTGGCGAGCGAGGTGCGCAGCCTGGCGCAGCGCTCCGCGGCCGCGGCCA
AGGAGATCAAGGAGCTGATTTCCTCGTCGGTGGCGATGATCGGCGACAGCACCCGGCAGGCCTCGCAGGTCGGCGAAACG
GTGGCCGAGGTCAAGCAGTCGATCCGGCGCGTGGCCGACCTGGTCGGTGAAATTACCGCGGCGTCGGCGGAGCAGGCGCG
CGGCATCGAGCAGGTCAGCGAGGCGGTCGGGCAGATGGACGGCGTGACGCAGCAGAATGCGGCCCTGGTCGAGCAGGTCA
CGGAGGCGGCGAAGTCGCTGGAGGATCAGGCCGAAAACCTGATGCGCGTGGTCGGCGTGTTCAAGATCCGCGCGCAGCGC
TGA

Upstream 100 bases:

>100_bases
GAGGAAATAAACCGCCCCCCCCACGGGGCTCTTGAGTTGGCAGCTTAGCCATGCCGTTCGCAATGGCTCGTCCGATACCG
TCACTATCTCGATACCACCC

Downstream 100 bases:

>100_bases
TCCGCCCGCGCCCTGAGCTTCCCCCTCTGCATGCATGCAGCGGCGCCGGGCGTTCGCGTCCGGCTGTCGTGAAGCGCGAT
TTCCTCCCGCCGCAGCATGC

Product: putative methyl-accepting chemotaxis receptor protein

Products: NA

Alternate protein names: Citrate chemoreceptor protein [H]

Number of amino acids: Translated: 640; Mature: 639

Protein sequence:

>640_residues
MPSYSNLSIQARFTLIIVAVFIGLLIATFAVIRLVVTPNLAILEGHVVSGEVDEISVLVSEQLRKVEAQQRTITETVPLL
SSDQIDTLLPVLVNQYGDPNVFGGGIWPLPKKRDATRDRFSTFYARDASGTLVVNTHWNQPDSLKYWEQPWYKNGEDAPK
GHCLWAKAYQDDASPQPRTNCAMGIYKDGQLYGVATIDVTLGFFNGLVSQMEQKIQGQVLIVERDGKIVSNSAGTPANSI
LKNLSEIQADSPMAAEILRQLSQGNIERSGKYLADGVSRTLFLQPIPDSPWLIATSVPTALLMKNSTRILQQLAAVQIPL
ALALLIVVLLGIRTLMKRLGMLREKIDDLSSGDADLTRRLPETGGKEFAAVAASLNRFVDRLHDIVVQVVAGTQSVTLGA
REIANGNRDLSARTEQQAAALEQSAASMTQLTQTVRQNADNARQANTLASGATDVANNGNEAVQGMVQTIDRISDSSGRI
SEITGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKELISSSVAMIGDSTRQASQVGET
VAEVKQSIRRVADLVGEITAASAEQARGIEQVSEAVGQMDGVTQQNAALVEQVTEAAKSLEDQAENLMRVVGVFKIRAQR

Sequences:

>Translated_640_residues
MPSYSNLSIQARFTLIIVAVFIGLLIATFAVIRLVVTPNLAILEGHVVSGEVDEISVLVSEQLRKVEAQQRTITETVPLL
SSDQIDTLLPVLVNQYGDPNVFGGGIWPLPKKRDATRDRFSTFYARDASGTLVVNTHWNQPDSLKYWEQPWYKNGEDAPK
GHCLWAKAYQDDASPQPRTNCAMGIYKDGQLYGVATIDVTLGFFNGLVSQMEQKIQGQVLIVERDGKIVSNSAGTPANSI
LKNLSEIQADSPMAAEILRQLSQGNIERSGKYLADGVSRTLFLQPIPDSPWLIATSVPTALLMKNSTRILQQLAAVQIPL
ALALLIVVLLGIRTLMKRLGMLREKIDDLSSGDADLTRRLPETGGKEFAAVAASLNRFVDRLHDIVVQVVAGTQSVTLGA
REIANGNRDLSARTEQQAAALEQSAASMTQLTQTVRQNADNARQANTLASGATDVANNGNEAVQGMVQTIDRISDSSGRI
SEITGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKELISSSVAMIGDSTRQASQVGET
VAEVKQSIRRVADLVGEITAASAEQARGIEQVSEAVGQMDGVTQQNAALVEQVTEAAKSLEDQAENLMRVVGVFKIRAQR
>Mature_639_residues
PSYSNLSIQARFTLIIVAVFIGLLIATFAVIRLVVTPNLAILEGHVVSGEVDEISVLVSEQLRKVEAQQRTITETVPLLS
SDQIDTLLPVLVNQYGDPNVFGGGIWPLPKKRDATRDRFSTFYARDASGTLVVNTHWNQPDSLKYWEQPWYKNGEDAPKG
HCLWAKAYQDDASPQPRTNCAMGIYKDGQLYGVATIDVTLGFFNGLVSQMEQKIQGQVLIVERDGKIVSNSAGTPANSIL
KNLSEIQADSPMAAEILRQLSQGNIERSGKYLADGVSRTLFLQPIPDSPWLIATSVPTALLMKNSTRILQQLAAVQIPLA
LALLIVVLLGIRTLMKRLGMLREKIDDLSSGDADLTRRLPETGGKEFAAVAASLNRFVDRLHDIVVQVVAGTQSVTLGAR
EIANGNRDLSARTEQQAAALEQSAASMTQLTQTVRQNADNARQANTLASGATDVANNGNEAVQGMVQTIDRISDSSGRIS
EITGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKELISSSVAMIGDSTRQASQVGETV
AEVKQSIRRVADLVGEITAASAEQARGIEQVSEAVGQMDGVTQQNAALVEQVTEAAKSLEDQAENLMRVVGVFKIRAQR

Specific function: Acts as a receptor for citrate and mediates taxis away from phenol. Also mediates an attractant response to metal-citrate complexes [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=319, Percent_Identity=50.4702194357367, Blast_Score=268, Evalue=6e-73,
Organism=Escherichia coli, GI1788195, Length=306, Percent_Identity=52.2875816993464, Blast_Score=267, Evalue=1e-72,
Organism=Escherichia coli, GI1788194, Length=304, Percent_Identity=50.9868421052632, Blast_Score=263, Evalue=3e-71,
Organism=Escherichia coli, GI2367378, Length=322, Percent_Identity=52.1739130434783, Blast_Score=260, Evalue=2e-70,
Organism=Escherichia coli, GI1789453, Length=254, Percent_Identity=40.1574803149606, Blast_Score=178, Evalue=8e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 68863; Mature: 68732

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSYSNLSIQARFTLIIVAVFIGLLIATFAVIRLVVTPNLAILEGHVVSGEVDEISVLVS
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECEEECCCHHHHHHHHH
EQLRKVEAQQRTITETVPLLSSDQIDTLLPVLVNQYGDPNVFGGGIWPLPKKRDATRDRF
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
STFYARDASGTLVVNTHWNQPDSLKYWEQPWYKNGEDAPKGHCLWAKAYQDDASPQPRTN
HHHHEECCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCC
CAMGIYKDGQLYGVATIDVTLGFFNGLVSQMEQKIQGQVLIVERDGKIVSNSAGTPANSI
CEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCHHHH
LKNLSEIQADSPMAAEILRQLSQGNIERSGKYLADGVSRTLFLQPIPDSPWLIATSVPTA
HHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCHHHHCCCCEEEEEECCCCCEEEEECCCHH
LLMKNSTRILQQLAAVQIPLALALLIVVLLGIRTLMKRLGMLREKIDDLSSGDADLTRRL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHC
PETGGKEFAAVAASLNRFVDRLHDIVVQVVAGTQSVTLGAREIANGNRDLSARTEQQAAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHCCCCCCCCHHHHHHHHH
LEQSAASMTQLTQTVRQNADNARQANTLASGATDVANNGNEAVQGMVQTIDRISDSSGRI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCH
SEITGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKELI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SSSVAMIGDSTRQASQVGETVAEVKQSIRRVADLVGEITAASAEQARGIEQVSEAVGQMD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHC
GVTQQNAALVEQVTEAAKSLEDQAENLMRVVGVFKIRAQR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PSYSNLSIQARFTLIIVAVFIGLLIATFAVIRLVVTPNLAILEGHVVSGEVDEISVLVS
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECEEECCCHHHHHHHHH
EQLRKVEAQQRTITETVPLLSSDQIDTLLPVLVNQYGDPNVFGGGIWPLPKKRDATRDRF
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
STFYARDASGTLVVNTHWNQPDSLKYWEQPWYKNGEDAPKGHCLWAKAYQDDASPQPRTN
HHHHEECCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCC
CAMGIYKDGQLYGVATIDVTLGFFNGLVSQMEQKIQGQVLIVERDGKIVSNSAGTPANSI
CEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCHHHH
LKNLSEIQADSPMAAEILRQLSQGNIERSGKYLADGVSRTLFLQPIPDSPWLIATSVPTA
HHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCHHHHCCCCEEEEEECCCCCEEEEECCCHH
LLMKNSTRILQQLAAVQIPLALALLIVVLLGIRTLMKRLGMLREKIDDLSSGDADLTRRL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHC
PETGGKEFAAVAASLNRFVDRLHDIVVQVVAGTQSVTLGAREIANGNRDLSARTEQQAAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHCCCCCCCCHHHHHHHHH
LEQSAASMTQLTQTVRQNADNARQANTLASGATDVANNGNEAVQGMVQTIDRISDSSGRI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCH
SEITGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKELI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SSSVAMIGDSTRQASQVGETVAEVKQSIRRVADLVGEITAASAEQARGIEQVSEAVGQMD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHC
GVTQQNAALVEQVTEAAKSLEDQAENLMRVVGVFKIRAQR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8419927; 11677609 [H]