| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is mlc [C]
Identifier: 238023899
GI number: 238023899
Start: 527584
End: 528831
Strand: Reverse
Name: mlc [C]
Synonym: bglu_2g04380
Alternate gene names: 238023899
Gene position: 528831-527584 (Counterclockwise)
Preceding gene: 238023900
Following gene: 238023898
Centisome position: 18.7
GC content: 70.27
Gene sequence:
>1248_bases ATGAGACGCCCGCACATCGGCCAAGGCAGCAATTCGGCCAATGTGCGTCGCTACAACGAGCGTCTGCTGCTGCAGATGCT GCGTCGCACGGGCAGCGCCTCGAAAGCCGACCTCGCGCGGCGCGCGAACATGACGGGCACGGCCGTCGGCAGCATCGTCG CGTCGCTGGCGGACGCGAAGCTCATCGAGTTTGCCGGCCGTACCGAAGGCCAGCGCGGCCAGCCGGCGTCGCTGATCCGC CTGGACCCGAACGGCGCGTTCGGAATCGGCGTGCGGGTGGACCGCATGCGCATCGAAACCGCGCTGGTCAACTTCACGGG CGACGTGATCAGCTGCCGCTCGCACGACATCTTTCTTCCGCCGCCCGCAACCGTGCTGGAAACCGTGCGCGGCGATATCG AGGAACTGCAGCGCCAGTTGCCCGCCCAGGCCCGGGACCGGCTCACGGGCGTCGGCGTGGCGCATCCGTTCAACCTCAGC AGCTGGCTGCGCGAACTGGGCCTGCCGGCCGAAGCGTTCCGCGCCTGGGCCGAAATCGATCTCGCCCGCGAGCTGGCCAG CCTCACGCCGCTGCCGGTCTTCAGCGAGAACGACGGCAACGCCGCCGCCATCGCGGAGCTATTCTACGGCCGCGGCCGGC AGCGCGACCATTTTGTCTATCTGTTCCTCGGGCCGGTGATCGGCGGCGGCATCGCGATCGACGGCGACTGCCTGCACGGC CGCACCGGCAACGCCGGTGATTTCGCCGTGATGCCGGTGCAGCCGAGCCGCCTGCGCTCGGCACCGGCCCCGCACGGCCC GTGGGACATGCTGCTCACGCGCGCGTCGCTGAGCGCGCTGATCCGGCATCTGCGCCATTGCGGCGAGACCGTGGACAGCC GCGCCGCGCTGAACGACTGCATCGCGCGCGGCGTGCCCGCCGTCGACGAATGGATCGACGACTGCGTGGACGCGCTCGCG TTCGCGCTGCGCTCGGTGCTGTCGGTGCTCGATCTGCCGGTGGTGGTGCTCGATTCGGACGTCGACGCCGGCCTGCTCGA CCGGCTCATCCCACGCCTGAGCGAGGCACTCGCCGCGATCACGCCGGAGGCGCGCAGCGCCCCCGAACTCGTGCGCGGTT CCTTCGGCGCGGACGCCGGCGCGATCGGCGCGGCCACCCTGCCGATGTTCTTCAACTTCTCACCCCGCTCCGGCATCCTG CGCGGGGCGGGTCCGGACAAGCAAGAGGTCGCCTATGTCTCTTTCTAA
Upstream 100 bases:
>100_bases AGGGTTTACCAAGATTGACGCCAGCACGCTTCATTGTTTAAATAAATCAACTTGATTTATTTAATGAGCCATCGGCCCCT ACCCCATGGAAGGAGACACC
Downstream 100 bases:
>100_bases GTCGTCCCAGCCGCTGCTCGAGATGCGCGGCATCAGCAAGACGTTCGCCGCCGTGCGCGCGCTCGACAATGTCGGGCTGA CCGTCTACCCCGGCGAAATT
Product: ROK family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MRRPHIGQGSNSANVRRYNERLLLQMLRRTGSASKADLARRANMTGTAVGSIVASLADAKLIEFAGRTEGQRGQPASLIR LDPNGAFGIGVRVDRMRIETALVNFTGDVISCRSHDIFLPPPATVLETVRGDIEELQRQLPAQARDRLTGVGVAHPFNLS SWLRELGLPAEAFRAWAEIDLARELASLTPLPVFSENDGNAAAIAELFYGRGRQRDHFVYLFLGPVIGGGIAIDGDCLHG RTGNAGDFAVMPVQPSRLRSAPAPHGPWDMLLTRASLSALIRHLRHCGETVDSRAALNDCIARGVPAVDEWIDDCVDALA FALRSVLSVLDLPVVVLDSDVDAGLLDRLIPRLSEALAAITPEARSAPELVRGSFGADAGAIGAATLPMFFNFSPRSGIL RGAGPDKQEVAYVSF
Sequences:
>Translated_415_residues MRRPHIGQGSNSANVRRYNERLLLQMLRRTGSASKADLARRANMTGTAVGSIVASLADAKLIEFAGRTEGQRGQPASLIR LDPNGAFGIGVRVDRMRIETALVNFTGDVISCRSHDIFLPPPATVLETVRGDIEELQRQLPAQARDRLTGVGVAHPFNLS SWLRELGLPAEAFRAWAEIDLARELASLTPLPVFSENDGNAAAIAELFYGRGRQRDHFVYLFLGPVIGGGIAIDGDCLHG RTGNAGDFAVMPVQPSRLRSAPAPHGPWDMLLTRASLSALIRHLRHCGETVDSRAALNDCIARGVPAVDEWIDDCVDALA FALRSVLSVLDLPVVVLDSDVDAGLLDRLIPRLSEALAAITPEARSAPELVRGSFGADAGAIGAATLPMFFNFSPRSGIL RGAGPDKQEVAYVSF >Mature_415_residues MRRPHIGQGSNSANVRRYNERLLLQMLRRTGSASKADLARRANMTGTAVGSIVASLADAKLIEFAGRTEGQRGQPASLIR LDPNGAFGIGVRVDRMRIETALVNFTGDVISCRSHDIFLPPPATVLETVRGDIEELQRQLPAQARDRLTGVGVAHPFNLS SWLRELGLPAEAFRAWAEIDLARELASLTPLPVFSENDGNAAAIAELFYGRGRQRDHFVYLFLGPVIGGGIAIDGDCLHG RTGNAGDFAVMPVQPSRLRSAPAPHGPWDMLLTRASLSALIRHLRHCGETVDSRAALNDCIARGVPAVDEWIDDCVDALA FALRSVLSVLDLPVVVLDSDVDAGLLDRLIPRLSEALAAITPEARSAPELVRGSFGADAGAIGAATLPMFFNFSPRSGIL RGAGPDKQEVAYVSF
Specific function: May Be A Regulator In Specific Sugar Metabolism. May Influence The Rate Of Glucose Uptake Or Glycolysis In Cells In The Rich Medium. [C]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Escherichia coli, GI1787878, Length=274, Percent_Identity=21.5328467153285, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR018335 - InterPro: IPR011991 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: NA
Molecular weight: Translated: 44548; Mature: 44548
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPHIGQGSNSANVRRYNERLLLQMLRRTGSASKADLARRANMTGTAVGSIVASLADAK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH LIEFAGRTEGQRGQPASLIRLDPNGAFGIGVRVDRMRIETALVNFTGDVISCRSHDIFLP HHHHHCCCCCCCCCCCEEEEECCCCCEEECEEEHHHHHHHHHHHCCCCEEEECCCCEECC PPATVLETVRGDIEELQRQLPAQARDRLTGVGVAHPFNLSSWLRELGLPAEAFRAWAEID CCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH LARELASLTPLPVFSENDGNAAAIAELFYGRGRQRDHFVYLFLGPVIGGGIAIDGDCLHG HHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCHHCCCEEECCCEECC RTGNAGDFAVMPVQPSRLRSAPAPHGPWDMLLTRASLSALIRHLRHCGETVDSRAALNDC CCCCCCCEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IARGVPAVDEWIDDCVDALAFALRSVLSVLDLPVVVLDSDVDAGLLDRLIPRLSEALAAI HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHC TPEARSAPELVRGSFGADAGAIGAATLPMFFNFSPRSGILRGAGPDKQEVAYVSF CCCCCCCHHHHHCCCCCCCCCCCHHHHHHEEECCCCCCCCCCCCCCHHCEEEECC >Mature Secondary Structure MRRPHIGQGSNSANVRRYNERLLLQMLRRTGSASKADLARRANMTGTAVGSIVASLADAK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH LIEFAGRTEGQRGQPASLIRLDPNGAFGIGVRVDRMRIETALVNFTGDVISCRSHDIFLP HHHHHCCCCCCCCCCCEEEEECCCCCEEECEEEHHHHHHHHHHHCCCCEEEECCCCEECC PPATVLETVRGDIEELQRQLPAQARDRLTGVGVAHPFNLSSWLRELGLPAEAFRAWAEID CCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH LARELASLTPLPVFSENDGNAAAIAELFYGRGRQRDHFVYLFLGPVIGGGIAIDGDCLHG HHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCHHCCCEEECCCEECC RTGNAGDFAVMPVQPSRLRSAPAPHGPWDMLLTRASLSALIRHLRHCGETVDSRAALNDC CCCCCCCEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IARGVPAVDEWIDDCVDALAFALRSVLSVLDLPVVVLDSDVDAGLLDRLIPRLSEALAAI HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHC TPEARSAPELVRGSFGADAGAIGAATLPMFFNFSPRSGILRGAGPDKQEVAYVSF CCCCCCCHHHHHCCCCCCCCCCCHHHHHHEEECCCCCCCCCCCCCCHHCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]