| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023892
Identifier: 238023892
GI number: 238023892
Start: 521338
End: 521820
Strand: Reverse
Name: 238023892
Synonym: bglu_2g04310
Alternate gene names: NA
Gene position: 521820-521338 (Counterclockwise)
Preceding gene: 238023893
Following gene: 238023891
Centisome position: 18.46
GC content: 73.5
Gene sequence:
>483_bases ATGAAATGGCCGTCATGCCGAACGCTGCTCGCGCTGTCGCTGGTCTTCAACGTCTTCCTGCTGGGCGGGATCGGTGGCGC GCTGTATCGCTGGCTCGGCGACGAGCACGCGATCCTCGCGCAGCGCAGCCGCAATCTGCGCTTCGCCGCGGACGGCCTGC CGGCGGCGCACCGGCAGGCCTTCGCGGCACTGCTCAAGGCCCAGCATCAGCAGGCCAGGCCGCTCGCCCAGGCCGCCAGG GACGGCCGCCGCAGCGTCGCGCAACTGCTGGTGGCGCCCGGTTTCGATCGCGCCGCGATCGACGCGGCGCTGGCCCGCAC GCGCGACGCCGATTTCGAGCAGCGCCGCCGCCTGGAAGAGAGCATCGTGAGCTTTGCCGAGGCGCTGCCGCCCACGGAAC GCGCGAGCCTGGCCCAGGGCCTGCAGCGGCGCGGCTCGTTCCAGCTGCCGGCAGCGGCCTCGACGGCCCGGGCCGCGCAT TGA
Upstream 100 bases:
>100_bases GCGTGCCGCCCGGCCGCCACCCCGCGCCGGGCTCGCCTTATGACGCGGGCACCTTCCGCGAGAATGCTTTCGATTGGCCG ACATCAGGTAAGGATAGCGA
Downstream 100 bases:
>100_bases TCGCACAGACTGTTACACAAACCGGCCGAGCCATCGTGCACGAAGCTTCGGCGCGCACCGTTACTGTGAGTGTGACCATC GCAACGGCTTTCACTCCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MKWPSCRTLLALSLVFNVFLLGGIGGALYRWLGDEHAILAQRSRNLRFAADGLPAAHRQAFAALLKAQHQQARPLAQAAR DGRRSVAQLLVAPGFDRAAIDAALARTRDADFEQRRRLEESIVSFAEALPPTERASLAQGLQRRGSFQLPAAASTARAAH
Sequences:
>Translated_160_residues MKWPSCRTLLALSLVFNVFLLGGIGGALYRWLGDEHAILAQRSRNLRFAADGLPAAHRQAFAALLKAQHQQARPLAQAAR DGRRSVAQLLVAPGFDRAAIDAALARTRDADFEQRRRLEESIVSFAEALPPTERASLAQGLQRRGSFQLPAAASTARAAH >Mature_160_residues MKWPSCRTLLALSLVFNVFLLGGIGGALYRWLGDEHAILAQRSRNLRFAADGLPAAHRQAFAALLKAQHQQARPLAQAAR DGRRSVAQLLVAPGFDRAAIDAALARTRDADFEQRRRLEESIVSFAEALPPTERASLAQGLQRRGSFQLPAAASTARAAH
Specific function: Unknown
COG id: COG5612
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17405; Mature: 17405
Theoretical pI: Translated: 11.92; Mature: 11.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWPSCRTLLALSLVFNVFLLGGIGGALYRWLGDEHAILAQRSRNLRFAADGLPAAHRQA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEECCCCCCHHHHHH FAALLKAQHQQARPLAQAARDGRRSVAQLLVAPGFDRAAIDAALARTRDADFEQRRRLEE HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHH SIVSFAEALPPTERASLAQGLQRRGSFQLPAAASTARAAH HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCC >Mature Secondary Structure MKWPSCRTLLALSLVFNVFLLGGIGGALYRWLGDEHAILAQRSRNLRFAADGLPAAHRQA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEECCCCCCHHHHHH FAALLKAQHQQARPLAQAARDGRRSVAQLLVAPGFDRAAIDAALARTRDADFEQRRRLEE HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHH SIVSFAEALPPTERASLAQGLQRRGSFQLPAAASTARAAH HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA