Click here to switch to the map view.

The map label for this gene is 238023888

Identifier: 238023888

GI number: 238023888

Start: 513641

End: 514828

Strand: Direct

Name: 238023888

Synonym: bglu_2g04270

Alternate gene names: NA

Gene position: 513641-514828 (Clockwise)

Preceding gene: 238023887

Following gene: 238023889

Centisome position: 18.17

GC content: 67.26

Gene sequence:

>1188_bases
GTGAACGAAGCAAACACACCGCGCACCCGTGCGCTGCTGCAGGTAATGATTCCGCTGTGCGGCGTCGCGATGTCCGGTGC
CGCGGCCGCGCAGTCGAGCGTCAGCCTCTACGGTGTGGTCGACAATGCGTTTGCCTACTCCAGCAATCAGGGCGGGCATT
CCAACTTCTACCTGAGCCAGGGGAACCTGCAGGCGAGCAAATTCGGCCTGTTGGGCAGCGAGGATCTGGGCGGCGGCAGC
CGCGCGATCTTTCGACTCGAAAGCGGCTTCAATTCGCTGACCGGTGCGCAAAGCAGCGCGGGGCTGATATTCAACCGGCA
GGCATACGTGGGGCTCGCCGACGACCGGCTGGGTACCCTGAGCCTCGGCCGCCAATACACGCCGTATTTCAACCTGGTCG
GCGCGCTCGGGCCGACCGGCGTGCTGACCGGCGCCACCGGCGCGCATCCCGGCGATCTCGACGCGCTGGACACGACGCTG
CGCTTGAACAACTCAGTCGCCTACGCGTCGCCCGTCATCGCCGGCCTGCAGTTCGGCGCGCAGTACGGCATCGGCGGCGT
GCCGGGCAGCATCGGAGCCGGCGGCATGTTCAGCGCCGCGCTGCGCTACGACTTCAAGGCGTTCGCCGCGGCAGCCGGCT
ATGTCCGGCTGCGGGACGGCGCCACCAGCCCCGCGCTGGGCAGCTTCGCGATCAATTCCCCCGTCAACAGCGGCTACGCG
ACCGCAGGCAGCGCGCAGATCGTCGGGGCCGCGGCGCGCTACAAGCTGGGCGACCTGATGCTGGGCGTCAATTACTCGAA
CGTGGAATATTCACCCGGCTCGGGTTCGCGCTTCACCGGCGCGGGCGTGTTCAACACTTACGGGGCGATTGCAACCTACA
GCTTCACGCCGGCGCTGACCGTGGGCGCCGGCTACAGCTTCACGGCCGCGAGCAAGGCGAACGGCATCGACGACCCCGCG
CGCTATCACCAGATTTCGCTCGAGGAGACTTACAGCCTGTCCAAGCGCACGACGCTCTACGCGCTGCAGGCTTACCAGCA
CGCCCGGGGCAAGACCCTCATCGCGACGGGATCGGGTGCCCCCGGCATCGTCTCGGCCGTCGCATCGGTCGGCGATTCGC
AGAATACGACGCCCTCGTCCGGGCCGTCGCAGATCGTCTGCATGCTCGGAATCCGGCACGCATTCTGA

Upstream 100 bases:

>100_bases
GTGACCTGCGCCGGCGCGGAGGTCGTGGGCGATGTGCTGAGCGCCGGGTGGCGATGCCTGACCGTGCGTGTCATATAAAT
TGAAAAGAGGAGATCCAGCC

Downstream 100 bases:

>100_bases
AGCGCGCTTACCGGCGCCCGATTCGGACCCGCCGCCCGCCTGCTCACGCAGGCGGGCGCGCAAGATGATAAAGAAGCGCA
GATGGGGCGCAAGTTTTCGT

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MNEANTPRTRALLQVMIPLCGVAMSGAAAAQSSVSLYGVVDNAFAYSSNQGGHSNFYLSQGNLQASKFGLLGSEDLGGGS
RAIFRLESGFNSLTGAQSSAGLIFNRQAYVGLADDRLGTLSLGRQYTPYFNLVGALGPTGVLTGATGAHPGDLDALDTTL
RLNNSVAYASPVIAGLQFGAQYGIGGVPGSIGAGGMFSAALRYDFKAFAAAAGYVRLRDGATSPALGSFAINSPVNSGYA
TAGSAQIVGAAARYKLGDLMLGVNYSNVEYSPGSGSRFTGAGVFNTYGAIATYSFTPALTVGAGYSFTAASKANGIDDPA
RYHQISLEETYSLSKRTTLYALQAYQHARGKTLIATGSGAPGIVSAVASVGDSQNTTPSSGPSQIVCMLGIRHAF

Sequences:

>Translated_395_residues
MNEANTPRTRALLQVMIPLCGVAMSGAAAAQSSVSLYGVVDNAFAYSSNQGGHSNFYLSQGNLQASKFGLLGSEDLGGGS
RAIFRLESGFNSLTGAQSSAGLIFNRQAYVGLADDRLGTLSLGRQYTPYFNLVGALGPTGVLTGATGAHPGDLDALDTTL
RLNNSVAYASPVIAGLQFGAQYGIGGVPGSIGAGGMFSAALRYDFKAFAAAAGYVRLRDGATSPALGSFAINSPVNSGYA
TAGSAQIVGAAARYKLGDLMLGVNYSNVEYSPGSGSRFTGAGVFNTYGAIATYSFTPALTVGAGYSFTAASKANGIDDPA
RYHQISLEETYSLSKRTTLYALQAYQHARGKTLIATGSGAPGIVSAVASVGDSQNTTPSSGPSQIVCMLGIRHAF
>Mature_395_residues
MNEANTPRTRALLQVMIPLCGVAMSGAAAAQSSVSLYGVVDNAFAYSSNQGGHSNFYLSQGNLQASKFGLLGSEDLGGGS
RAIFRLESGFNSLTGAQSSAGLIFNRQAYVGLADDRLGTLSLGRQYTPYFNLVGALGPTGVLTGATGAHPGDLDALDTTL
RLNNSVAYASPVIAGLQFGAQYGIGGVPGSIGAGGMFSAALRYDFKAFAAAAGYVRLRDGATSPALGSFAINSPVNSGYA
TAGSAQIVGAAARYKLGDLMLGVNYSNVEYSPGSGSRFTGAGVFNTYGAIATYSFTPALTVGAGYSFTAASKANGIDDPA
RYHQISLEETYSLSKRTTLYALQAYQHARGKTLIATGSGAPGIVSAVASVGDSQNTTPSSGPSQIVCMLGIRHAF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40321; Mature: 40321

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEANTPRTRALLQVMIPLCGVAMSGAAAAQSSVSLYGVVDNAFAYSSNQGGHSNFYLSQ
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEEEECCEEECCCCCCCCEEEEEC
GNLQASKFGLLGSEDLGGGSRAIFRLESGFNSLTGAQSSAGLIFNRQAYVGLADDRLGTL
CCCCHHHCCCCCCCCCCCCCEEEEEEECCCCHHCCCCCCCCEEEECCEEEEECCCCCCCH
SLGRQYTPYFNLVGALGPTGVLTGATGAHPGDLDALDTTLRLNNSVAYASPVIAGLQFGA
HCCCCCCCHHHHHHCCCCCCEEECCCCCCCCCCHHHCEEEEECCCEEHHHHHHHHHHHHH
QYGIGGVPGSIGAGGMFSAALRYDFKAFAAAAGYVRLRDGATSPALGSFAINSPVNSGYA
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEECCCCCCCCC
TAGSAQIVGAAARYKLGDLMLGVNYSNVEYSPGSGSRFTGAGVFNTYGAIATYSFTPALT
CCCCCEEEEHHHHEEECEEEEECCCCCEEECCCCCCCEECCCHHHCCCCEEEEECCCEEE
VGAGYSFTAASKANGIDDPARYHQISLEETYSLSKRTTLYALQAYQHARGKTLIATGSGA
ECCCCEEECCCCCCCCCCCHHHEEEEHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCC
PGIVSAVASVGDSQNTTPSSGPSQIVCMLGIRHAF
CHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHCC
>Mature Secondary Structure
MNEANTPRTRALLQVMIPLCGVAMSGAAAAQSSVSLYGVVDNAFAYSSNQGGHSNFYLSQ
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEEEECCEEECCCCCCCCEEEEEC
GNLQASKFGLLGSEDLGGGSRAIFRLESGFNSLTGAQSSAGLIFNRQAYVGLADDRLGTL
CCCCHHHCCCCCCCCCCCCCEEEEEEECCCCHHCCCCCCCCEEEECCEEEEECCCCCCCH
SLGRQYTPYFNLVGALGPTGVLTGATGAHPGDLDALDTTLRLNNSVAYASPVIAGLQFGA
HCCCCCCCHHHHHHCCCCCCEEECCCCCCCCCCHHHCEEEEECCCEEHHHHHHHHHHHHH
QYGIGGVPGSIGAGGMFSAALRYDFKAFAAAAGYVRLRDGATSPALGSFAINSPVNSGYA
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEECCCCCCCCC
TAGSAQIVGAAARYKLGDLMLGVNYSNVEYSPGSGSRFTGAGVFNTYGAIATYSFTPALT
CCCCCEEEEHHHHEEECEEEEECCCCCEEECCCCCCCEECCCHHHCCCCEEEEECCCEEE
VGAGYSFTAASKANGIDDPARYHQISLEETYSLSKRTTLYALQAYQHARGKTLIATGSGA
ECCCCEEECCCCCCCCCCCHHHEEEEHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCC
PGIVSAVASVGDSQNTTPSSGPSQIVCMLGIRHAF
CHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]