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The map label for this gene is setC [C]

Identifier: 238023869

GI number: 238023869

Start: 488918

End: 490174

Strand: Direct

Name: setC [C]

Synonym: bglu_2g04080

Alternate gene names: 238023869

Gene position: 488918-490174 (Clockwise)

Preceding gene: 238023868

Following gene: 238023872

Centisome position: 17.29

GC content: 74.54

Gene sequence:

>1257_bases
ATGCGAGCCCGGTTTGCCGGCCTGGTCCGGATTCCGCATTTCGTCGCGCTGTCCGCGGCCGCGCTGATGCTGGGCGTCGC
GATGTCGTTTACCGCGCCGTTTCTGTCGCTGTTCGGCGTCGAGGCGGCCGGCATGTCGCCGTGGGTCGCCGGCGGGTTCA
TGACACTGATCGCGGCCAGCGGCGTGATCGCGAGCACCTGGGCGGGGCGCTGGTCGGATCGCCATGCCCGCCACCGGCCC
CTGCTCGTCGCGTCGCTCGCGGCCGCCGGGCTCGGCTTCGCGCTGTTGTGCCGGCTGCGCGCCCAGGCGCCCGTGATCGC
CACCGGCACGCTGCTGCTGGGGGCGGGCGCCGTGTCGCTGTCGCACATCTTCTCGTTCGCCCGCGCGGTGCTGCCGGCGG
CGGACGAAGCCGAGCGCGAGCTCGCCGCGGCGGCGCTGCGCACGATGCTGTCCGTGGCGTGGGTGTTCGGGCCGGCGCTC
GGCGCGCTGATCCTCGCGCAAGCGGGCTTCTTCGGCCTGTTTCTTGCCGCCGCGCTCGGCTTCGCGGTGTGCATGATGAT
CGTGATGCGGATTCCCGAGCCGGCCGCGCGGGCCGCCCCTGCCGCAGCGCCGGCGCGCGCCGCCGGTGCGCCGGCGGCCG
CGGCGCATCCCACCGCGCCGCGAGCGGTCGTCATGCGCACGCTGGCCGCACTGACGCTGATCGGCCTGGCGGCGAACGCG
ACGATGATCGTGCTGCCGCTGTTCCTCGTGCGCGGCCTGGGCGGCTCGCCCGCGGACGTGTCGGCCGCGCTCGGCCTGGC
GGCGCTGCTGGAGATTCCGATGATGCTCTGGCTCGGAGTGCGCTCGTCCCGGCTCGACAAGGCCCGCTGGCTGACCGGCT
GCGCGGCCGTGCATGCGCTCTATTTCGCCGGACTCGCGGTGGTGCCGCATGTCGGCGCGGTGCTGCCGCTCCAGTTGCTG
AGCGCCGCTGTCGTCGCGATTACGTCGTGCCTCGGCATGACGCGCGTGTGCGACATGATGCCGGCGCGCCCCGGCACCGC
GACCGCGATGTTCTTCAGCACCGCCCGCGTCGGGTCGATCGTGTCGGGAATCCTGTCCGGCGCGCTGCTCGACCTGTTCG
GCTATCGCGCGACGTTCCTGTGCTGCGGCGCGCTGGCGCTCGCGGCATGGGGGCTGCTGCGCGCGGCCCGCGAGCCGGGC
GCCGGCGCCGCGAACGATGCGCGCCGCGCGCGCGGACGCTGCGATACGCCCGGCTGA

Upstream 100 bases:

>100_bases
CCGGTGCCGGCGCCCGCGCCGGTGAACGCGACCTTCGTGCTGGGCGGGCCGGTGATCGGCGCGGTCGACGCCGCGGCCTG
GATCGTGCCGGGCTGAGCGC

Downstream 100 bases:

>100_bases
CGCACGGCGGCGACCGGCCCCGGGCCGGCCGCCGCGCTCGCGGCTCACGCCGCGAGCGGTCAGGCCTCAGCGCTGCCGGA
ACGCATCCAGTGACGAGAGC

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MRARFAGLVRIPHFVALSAAALMLGVAMSFTAPFLSLFGVEAAGMSPWVAGGFMTLIAASGVIASTWAGRWSDRHARHRP
LLVASLAAAGLGFALLCRLRAQAPVIATGTLLLGAGAVSLSHIFSFARAVLPAADEAERELAAAALRTMLSVAWVFGPAL
GALILAQAGFFGLFLAAALGFAVCMMIVMRIPEPAARAAPAAAPARAAGAPAAAAHPTAPRAVVMRTLAALTLIGLAANA
TMIVLPLFLVRGLGGSPADVSAALGLAALLEIPMMLWLGVRSSRLDKARWLTGCAAVHALYFAGLAVVPHVGAVLPLQLL
SAAVVAITSCLGMTRVCDMMPARPGTATAMFFSTARVGSIVSGILSGALLDLFGYRATFLCCGALALAAWGLLRAAREPG
AGAANDARRARGRCDTPG

Sequences:

>Translated_418_residues
MRARFAGLVRIPHFVALSAAALMLGVAMSFTAPFLSLFGVEAAGMSPWVAGGFMTLIAASGVIASTWAGRWSDRHARHRP
LLVASLAAAGLGFALLCRLRAQAPVIATGTLLLGAGAVSLSHIFSFARAVLPAADEAERELAAAALRTMLSVAWVFGPAL
GALILAQAGFFGLFLAAALGFAVCMMIVMRIPEPAARAAPAAAPARAAGAPAAAAHPTAPRAVVMRTLAALTLIGLAANA
TMIVLPLFLVRGLGGSPADVSAALGLAALLEIPMMLWLGVRSSRLDKARWLTGCAAVHALYFAGLAVVPHVGAVLPLQLL
SAAVVAITSCLGMTRVCDMMPARPGTATAMFFSTARVGSIVSGILSGALLDLFGYRATFLCCGALALAAWGLLRAAREPG
AGAANDARRARGRCDTPG
>Mature_418_residues
MRARFAGLVRIPHFVALSAAALMLGVAMSFTAPFLSLFGVEAAGMSPWVAGGFMTLIAASGVIASTWAGRWSDRHARHRP
LLVASLAAAGLGFALLCRLRAQAPVIATGTLLLGAGAVSLSHIFSFARAVLPAADEAERELAAAALRTMLSVAWVFGPAL
GALILAQAGFFGLFLAAALGFAVCMMIVMRIPEPAARAAPAAAPARAAGAPAAAAHPTAPRAVVMRTLAALTLIGLAANA
TMIVLPLFLVRGLGGSPADVSAALGLAALLEIPMMLWLGVRSSRLDKARWLTGCAAVHALYFAGLAVVPHVGAVLPLQLL
SAAVVAITSCLGMTRVCDMMPARPGTATAMFFSTARVGSIVSGILSGALLDLFGYRATFLCCGALALAAWGLLRAAREPG
AGAANDARRARGRCDTPG

Specific function: Involved in the efflux of sugars. The physiological role may be the detoxification of non-metabolizable sugar analogs [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Set transporter family [H]

Homologues:

Organism=Escherichia coli, GI1790091, Length=387, Percent_Identity=30.4909560723514, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI48994875, Length=379, Percent_Identity=29.023746701847, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1788495, Length=366, Percent_Identity=30.327868852459, Blast_Score=112, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42579; Mature: 42579

Theoretical pI: Translated: 11.80; Mature: 11.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRARFAGLVRIPHFVALSAAALMLGVAMSFTAPFLSLFGVEAAGMSPWVAGGFMTLIAAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHC
GVIASTWAGRWSDRHARHRPLLVASLAAAGLGFALLCRLRAQAPVIATGTLLLGAGAVSL
CHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHH
SHIFSFARAVLPAADEAERELAAAALRTMLSVAWVFGPALGALILAQAGFFGLFLAAALG
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAVCMMIVMRIPEPAARAAPAAAPARAAGAPAAAAHPTAPRAVVMRTLAALTLIGLAANA
HHHHHHHHHHCCCHHHHCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCH
TMIVLPLFLVRGLGGSPADVSAALGLAALLEIPMMLWLGVRSSRLDKARWLTGCAAVHAL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
YFAGLAVVPHVGAVLPLQLLSAAVVAITSCLGMTRVCDMMPARPGTATAMFFSTARVGSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
VSGILSGALLDLFGYRATFLCCGALALAAWGLLRAAREPGAGAANDARRARGRCDTPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MRARFAGLVRIPHFVALSAAALMLGVAMSFTAPFLSLFGVEAAGMSPWVAGGFMTLIAAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHC
GVIASTWAGRWSDRHARHRPLLVASLAAAGLGFALLCRLRAQAPVIATGTLLLGAGAVSL
CHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHH
SHIFSFARAVLPAADEAERELAAAALRTMLSVAWVFGPALGALILAQAGFFGLFLAAALG
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAVCMMIVMRIPEPAARAAPAAAPARAAGAPAAAAHPTAPRAVVMRTLAALTLIGLAANA
HHHHHHHHHHCCCHHHHCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCH
TMIVLPLFLVRGLGGSPADVSAALGLAALLEIPMMLWLGVRSSRLDKARWLTGCAAVHAL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
YFAGLAVVPHVGAVLPLQLLSAAVVAITSCLGMTRVCDMMPARPGTATAMFFSTARVGSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
VSGILSGALLDLFGYRATFLCCGALALAAWGLLRAAREPGAGAANDARRARGRCDTPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]