| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023792
Identifier: 238023792
GI number: 238023792
Start: 389265
End: 390212
Strand: Reverse
Name: 238023792
Synonym: bglu_2g03280
Alternate gene names: NA
Gene position: 390212-389265 (Counterclockwise)
Preceding gene: 238023793
Following gene: 238023789
Centisome position: 13.8
GC content: 64.14
Gene sequence:
>948_bases ATGTTCAAGAAAATCTTCAGTGGTGGCGACTCCTCAACGTCGTGGAACGCTCTGGCAAACGTCGATCGCGACGACGTCGT CAAGACTCACGAATCCGTCGCGCCGGGAAGCATCGGCATCGGCTCATACAGCCATGCGACGGTTCGTGTCGCGCCGGCGA CGCTCCAGAACCTCAAGGCAGCGTCCTGGGCAAACCGTGCCGCCAAGCGTGTGATGGAGCACGGCGCCGGTAATCAACGC GTGGACATCCACGCGTCGAGCGGCGAAAGCTGGGCGCGCAGCGAAGGCGGGGCAAGCAAGTACCCGAGCCGCATCGAACG CGCCCAAAAGGAACAGGGAGGCAACTGCCACGTCTTCACCGATGTGGCGACGGCCGCCCTGCACTCCGGAAATGGTCCTG AATTCTCGGGATCGGTCCACCGCGTCTGGTTGAAGTTGCCGACCCCGCCGGGTGGGCAGGAGAAAGATCACGTTTTCGCG ACGATCGGCGACCCGGAGCGATCAGCCGCCCAGGACGTGGTGGTGGTGGACGCGTGGCCGGGCCATCCGAGCGCCTGCAC GCTTGACCGCGCTACCCTGGTCGACGCGAGCACCGGCGAGCGCCATCATCTCGCCAGCCTCCTGTCGAACCGCAACACTC GCTACATCAGCTCGCAGGTAAGAGCGAACAGCGCCGATTCCGAGCGGCTCACGAAGATCAAGCCCATGAGCACCCACGAC GTGAACAAGCAACTGCGCAAGATGGGCGCGCCCGAAGTCGGCCCCGACCTGGTACGCCACATCGAGCAGCAAGCGCATGC GCGAACCGGAACGCCGCTGTTCGACGTGCGCGTCGCGACAGATCCGAGTATCCGTTACACGGACGGCACGTCTTACGCCC AGACCTTTGACGAGGTTTCCACGGATACGCTGAGCAAGCAACAGGCCGGGCGCAGCTCGCTGCGATGA
Upstream 100 bases:
>100_bases TCTTTACGGTCATGCCTGGTCGCCGTCGCGCCTACCGATCCGGTGCGGGCATGAACACAAGCCGCGTTTTGCGCAGGCTC AGTCAATTCGAGGAAGAATC
Downstream 100 bases:
>100_bases GCCTGCACGCGCTTATCGAATCCGCGGCGCCCGTAGCGCCTGCAGCTCGTTGCTGACTTGTCGTCCGGCCATACCGCGAG GGCATGGCCCGCAACGCTTC
Product: type III effector
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MFKKIFSGGDSSTSWNALANVDRDDVVKTHESVAPGSIGIGSYSHATVRVAPATLQNLKAASWANRAAKRVMEHGAGNQR VDIHASSGESWARSEGGASKYPSRIERAQKEQGGNCHVFTDVATAALHSGNGPEFSGSVHRVWLKLPTPPGGQEKDHVFA TIGDPERSAAQDVVVVDAWPGHPSACTLDRATLVDASTGERHHLASLLSNRNTRYISSQVRANSADSERLTKIKPMSTHD VNKQLRKMGAPEVGPDLVRHIEQQAHARTGTPLFDVRVATDPSIRYTDGTSYAQTFDEVSTDTLSKQQAGRSSLR
Sequences:
>Translated_315_residues MFKKIFSGGDSSTSWNALANVDRDDVVKTHESVAPGSIGIGSYSHATVRVAPATLQNLKAASWANRAAKRVMEHGAGNQR VDIHASSGESWARSEGGASKYPSRIERAQKEQGGNCHVFTDVATAALHSGNGPEFSGSVHRVWLKLPTPPGGQEKDHVFA TIGDPERSAAQDVVVVDAWPGHPSACTLDRATLVDASTGERHHLASLLSNRNTRYISSQVRANSADSERLTKIKPMSTHD VNKQLRKMGAPEVGPDLVRHIEQQAHARTGTPLFDVRVATDPSIRYTDGTSYAQTFDEVSTDTLSKQQAGRSSLR >Mature_315_residues MFKKIFSGGDSSTSWNALANVDRDDVVKTHESVAPGSIGIGSYSHATVRVAPATLQNLKAASWANRAAKRVMEHGAGNQR VDIHASSGESWARSEGGASKYPSRIERAQKEQGGNCHVFTDVATAALHSGNGPEFSGSVHRVWLKLPTPPGGQEKDHVFA TIGDPERSAAQDVVVVDAWPGHPSACTLDRATLVDASTGERHHLASLLSNRNTRYISSQVRANSADSERLTKIKPMSTHD VNKQLRKMGAPEVGPDLVRHIEQQAHARTGTPLFDVRVATDPSIRYTDGTSYAQTFDEVSTDTLSKQQAGRSSLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33953; Mature: 33953
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKIFSGGDSSTSWNALANVDRDDVVKTHESVAPGSIGIGSYSHATVRVAPATLQNLKA CCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHH ASWANRAAKRVMEHGAGNQRVDIHASSGESWARSEGGASKYPSRIERAQKEQGGNCHVFT HHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHCCCCEEEEH DVATAALHSGNGPEFSGSVHRVWLKLPTPPGGQEKDHVFATIGDPERSAAQDVVVVDAWP HHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCC GHPSACTLDRATLVDASTGERHHLASLLSNRNTRYISSQVRANSADSERLTKIKPMSTHD CCCCCEEECCEEEEECCCCCHHHHHHHHHCCCCEEEHHHHHCCCCCHHHHHCCCCCCHHH VNKQLRKMGAPEVGPDLVRHIEQQAHARTGTPLFDVRVATDPSIRYTDGTSYAQTFDEVS HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCHHHHHHHHHH TDTLSKQQAGRSSLR HHHHHHHHCCHHCCC >Mature Secondary Structure MFKKIFSGGDSSTSWNALANVDRDDVVKTHESVAPGSIGIGSYSHATVRVAPATLQNLKA CCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHH ASWANRAAKRVMEHGAGNQRVDIHASSGESWARSEGGASKYPSRIERAQKEQGGNCHVFT HHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHCCCCEEEEH DVATAALHSGNGPEFSGSVHRVWLKLPTPPGGQEKDHVFATIGDPERSAAQDVVVVDAWP HHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCC GHPSACTLDRATLVDASTGERHHLASLLSNRNTRYISSQVRANSADSERLTKIKPMSTHD CCCCCEEECCEEEEECCCCCHHHHHHHHHCCCCEEEHHHHHCCCCCHHHHHCCCCCCHHH VNKQLRKMGAPEVGPDLVRHIEQQAHARTGTPLFDVRVATDPSIRYTDGTSYAQTFDEVS HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCHHHHHHHHHH TDTLSKQQAGRSSLR HHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA