| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is dnaK [H]
Identifier: 238023764
GI number: 238023764
Start: 344896
End: 346743
Strand: Reverse
Name: dnaK [H]
Synonym: bglu_2g02960
Alternate gene names: 238023764
Gene position: 346743-344896 (Counterclockwise)
Preceding gene: 238023765
Following gene: 238023763
Centisome position: 12.26
GC content: 73.54
Gene sequence:
>1848_bases GTGAGCGAGCCGCGTTTCTCGATCGGTATCGATCTCGGTACCACGCATTGCGCGCTGTCCTATATCGATCTCGCCGCAAG CGACGGCGACGCGCCGCAGCAGCAGGTGCTGCCGATCGCGCAATTGACCTCGCCCGGCGCGATCGGCGCGCCGAGCCTGC TGCCGTCGTTCCTCTACCTGCCCCATCCGGGCGAACTCACGCCGGGCGACCTGACGCTGCCGTGGACGGCGACGCGCGAC TACGCGGTGGGCGAGATGGCGCGCAGCCGCGGCGCCGGCACGCCGATCCGGCTCGTGTCGAGCGCGAAGAGCTGGCTCTG CCATCCGGGCGTCGACCGCCGCGCGGCGATCCTGCCCAACGACGCGCCGCCCGAAGTCGAGCGCGTCTCGCCGCTCGAGG CATCGGTGCGCTATCTCGCGCATCTGCGCGAGGCCTGGGACCACGCGCACCCGGACGCGCCGTTCGCCGCGCAGGCGGTG ACGGTCACGATCCCGGCCTCGTTCGATCCGGCCGCGCGCGAGCTGACCGCCGAGGCCGCGCAGGCCGCCGGCTACGCAAG CACCACGCTGCTGGAGGAGCCGCAGGCCGCGCTCTACAGCTGGATCCAGAAGAGCGGCGGCGGCTGGCGCAAGGACGTGA AGGTCGGTGACGTCATCCTGGTGGTGGACGTGGGCGGCGGCACCACCGACCTCTCGCTGATCGCCGTGGTCGAGCGCGAC GGCAAGCTCGAGCTGCACCGCGTGGCGGTGGGCGAGCACATCCTGCTCGGCGGCGACAACATGGACCTCGCGCTCGCGCA CGTGGTCGCGCGCAAGCTGGCCGCGCAGGGCACCCAGGCCGATCCGTGGCAGCTGCGCGCGCTGACCTACGCGTGCCGCG GCGCGAAGGAGGCGCTGCTCGGCGACCGCACGCTCGACGCCGTGCCGCTGGTGGTGCCGAGCCGCGGCTCGAAGCTGATC GGCGGCTCGATCCGCACCGAGCTCACGCGCGCCGAGCTCACGCAGATCCTGCTCGACGGCTTCTTCCCGCAGGTGGACGC CGCCGCGCGGCCGGCGGTGCGCACGCGCGCCGGCCTCACCCAGCTCGGTCTGCCCTATGCGCAGGACGCCGGCATCACGC GCCACCTCGCCGCCTTCCTCGGCAAGCAGGTGGGCGCGCTCGCCGAGCTCGGCGGGCAGCCGGCTGCACCGGCCGGCGGC GCGAGCTTCCTGCACCCCACCGCCGTGCTGTTCAACGGCGGCGTGTTCAAGTCCGACCTGCTGACCGAGCGCGTCCTCAC GATCCTGAACGGCTGGCTGGCGGCCGACGGGGCCGCGCCCGCGCGCCTGCTCGGCGGCGCCGACCTCGACCTCGCGGTGG CGCGCGGCGCGGCCTACTACGGCTACGTCAAGCGCGGCCGCGGCGTGCGGATTCGCGGCGGCACGGCACGCGCCTACTAC ATCGCCATCGAATCGGCGATGCCGGCGATCCCCGGCATGGAGCCGCCCGTCTGCGCGCTCTGCGTGGCGCCGTTCGGCAT GGAGGAAGGCTCGGACGCCGCGCTGCCCGAGCAGGAGTTCGGCCTGGTGGTGGGCGAACCGGTGACGTTCCGCTTCTTCG GCTCGTCGGTGCGGCGCCAGGATCAGGTCGGCACCCTGCTCGACTACTGGTCCGCCGACGAGCTGCAGGAACTCGAGGCG ATCCAGGCCACGCTGCCCGCCGAGGGCCGCACGCCCGGCGAAGTGGTGGCCGTGCGGCTGCACGCACGCGTGACCGAAGC CGGCACCCTCGAACTCGAAGCGATGCCGCGTGGCAGCGGCGAGCGCTGGAAGGTCGAATTCGACGTGCGCGGCGGCGCGG ACGCCTGA
Upstream 100 bases:
>100_bases GCACGCTGAGCCACCGCGGCTGGCGCGCCGCCGAGGTGAAGCTGCCGCAGCGGGTCGGCACCCACGACCCGAGCGTGATC GCGCCGGCGGAGGTGGAGCT
Downstream 100 bases:
>100_bases TGGCGCGAGCGAAGGCACGCTACGTCGTCGGCATCGACCTCGGCACCAGCAACACCGTGGTCGCCTACGTCGAGGCGGGC GGCACCGCGATCCGCCTGTT
Product: putative DnaK-like protein
Products: NA
Alternate protein names: HSP70; Heat shock 70 kDa protein; Heat shock protein 70 [H]
Number of amino acids: Translated: 615; Mature: 614
Protein sequence:
>615_residues MSEPRFSIGIDLGTTHCALSYIDLAASDGDAPQQQVLPIAQLTSPGAIGAPSLLPSFLYLPHPGELTPGDLTLPWTATRD YAVGEMARSRGAGTPIRLVSSAKSWLCHPGVDRRAAILPNDAPPEVERVSPLEASVRYLAHLREAWDHAHPDAPFAAQAV TVTIPASFDPAARELTAEAAQAAGYASTTLLEEPQAALYSWIQKSGGGWRKDVKVGDVILVVDVGGGTTDLSLIAVVERD GKLELHRVAVGEHILLGGDNMDLALAHVVARKLAAQGTQADPWQLRALTYACRGAKEALLGDRTLDAVPLVVPSRGSKLI GGSIRTELTRAELTQILLDGFFPQVDAAARPAVRTRAGLTQLGLPYAQDAGITRHLAAFLGKQVGALAELGGQPAAPAGG ASFLHPTAVLFNGGVFKSDLLTERVLTILNGWLAADGAAPARLLGGADLDLAVARGAAYYGYVKRGRGVRIRGGTARAYY IAIESAMPAIPGMEPPVCALCVAPFGMEEGSDAALPEQEFGLVVGEPVTFRFFGSSVRRQDQVGTLLDYWSADELQELEA IQATLPAEGRTPGEVVAVRLHARVTEAGTLELEAMPRGSGERWKVEFDVRGGADA
Sequences:
>Translated_615_residues MSEPRFSIGIDLGTTHCALSYIDLAASDGDAPQQQVLPIAQLTSPGAIGAPSLLPSFLYLPHPGELTPGDLTLPWTATRD YAVGEMARSRGAGTPIRLVSSAKSWLCHPGVDRRAAILPNDAPPEVERVSPLEASVRYLAHLREAWDHAHPDAPFAAQAV TVTIPASFDPAARELTAEAAQAAGYASTTLLEEPQAALYSWIQKSGGGWRKDVKVGDVILVVDVGGGTTDLSLIAVVERD GKLELHRVAVGEHILLGGDNMDLALAHVVARKLAAQGTQADPWQLRALTYACRGAKEALLGDRTLDAVPLVVPSRGSKLI GGSIRTELTRAELTQILLDGFFPQVDAAARPAVRTRAGLTQLGLPYAQDAGITRHLAAFLGKQVGALAELGGQPAAPAGG ASFLHPTAVLFNGGVFKSDLLTERVLTILNGWLAADGAAPARLLGGADLDLAVARGAAYYGYVKRGRGVRIRGGTARAYY IAIESAMPAIPGMEPPVCALCVAPFGMEEGSDAALPEQEFGLVVGEPVTFRFFGSSVRRQDQVGTLLDYWSADELQELEA IQATLPAEGRTPGEVVAVRLHARVTEAGTLELEAMPRGSGERWKVEFDVRGGADA >Mature_614_residues SEPRFSIGIDLGTTHCALSYIDLAASDGDAPQQQVLPIAQLTSPGAIGAPSLLPSFLYLPHPGELTPGDLTLPWTATRDY AVGEMARSRGAGTPIRLVSSAKSWLCHPGVDRRAAILPNDAPPEVERVSPLEASVRYLAHLREAWDHAHPDAPFAAQAVT VTIPASFDPAARELTAEAAQAAGYASTTLLEEPQAALYSWIQKSGGGWRKDVKVGDVILVVDVGGGTTDLSLIAVVERDG KLELHRVAVGEHILLGGDNMDLALAHVVARKLAAQGTQADPWQLRALTYACRGAKEALLGDRTLDAVPLVVPSRGSKLIG GSIRTELTRAELTQILLDGFFPQVDAAARPAVRTRAGLTQLGLPYAQDAGITRHLAAFLGKQVGALAELGGQPAAPAGGA SFLHPTAVLFNGGVFKSDLLTERVLTILNGWLAADGAAPARLLGGADLDLAVARGAAYYGYVKRGRGVRIRGGTARAYYI AIESAMPAIPGMEPPVCALCVAPFGMEEGSDAALPEQEFGLVVGEPVTFRFFGSSVRRQDQVGTLLDYWSADELQELEAI QATLPAEGRTPGEVVAVRLHARVTEAGTLELEAMPRGSGERWKVEFDVRGGADA
Specific function: Acts as a chaperone [H]
COG id: COG0443
COG function: function code O; Molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 70 family [H]
Homologues:
Organism=Escherichia coli, GI1786196, Length=354, Percent_Identity=25.9887005649718, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1788875, Length=307, Percent_Identity=28.3387622149837, Blast_Score=63, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17534015, Length=250, Percent_Identity=26.4, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17534013, Length=250, Percent_Identity=26.4, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17541098, Length=189, Percent_Identity=30.1587301587302, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: 1300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 320 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 500 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stati
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012725 - InterPro: IPR018181 - InterPro: IPR001023 - InterPro: IPR013126 [H]
Pfam domain/function: PF00012 HSP70 [H]
EC number: NA
Molecular weight: Translated: 64808; Mature: 64677
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS00297 HSP70_1 ; PS00329 HSP70_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPRFSIGIDLGTTHCALSYIDLAASDGDAPQQQVLPIAQLTSPGAIGAPSLLPSFLYL CCCCCEEEEEECCCHHHHHHHHEEECCCCCCCHHHCCCHHHHCCCCCCCCHHHHHHHEEC PHPGELTPGDLTLPWTATRDYAVGEMARSRGAGTPIRLVSSAKSWLCHPGVDRRAAILPN CCCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEECCC DAPPEVERVSPLEASVRYLAHLREAWDHAHPDAPFAAQAVTVTIPASFDPAARELTAEAA CCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHH QAAGYASTTLLEEPQAALYSWIQKSGGGWRKDVKVGDVILVVDVGGGTTDLSLIAVVERD HHCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCEECCEEEEEECCCCCCCEEEEEEEECC GKLELHRVAVGEHILLGGDNMDLALAHVVARKLAAQGTQADPWQLRALTYACRGAKEALL CCEEEEEEEECCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHH GDRTLDAVPLVVPSRGSKLIGGSIRTELTRAELTQILLDGFFPQVDAAARPAVRTRAGLT CCCCCCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHCCHH QLGLPYAQDAGITRHLAAFLGKQVGALAELGGQPAAPAGGASFLHPTAVLFNGGVFKSDL HHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCHHEECCCCCHHHH LTERVLTILNGWLAADGAAPARLLGGADLDLAVARGAAYYGYVKRGRGVRIRGGTARAYY HHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHCCCHHHHHHCCCCEEEEECCCCEEEE IAIESAMPAIPGMEPPVCALCVAPFGMEEGSDAALPEQEFGLVVGEPVTFRFFGSSVRRQ EEEECCCCCCCCCCCCHHEEEECCCCCCCCCCCCCCHHHCCEEECCCEEEEECCCHHHHH DQVGTLLDYWSADELQELEAIQATLPAEGRTPGEVVAVRLHARVTEAGTLELEAMPRGSG HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCC ERWKVEFDVRGGADA CEEEEEEEECCCCCC >Mature Secondary Structure SEPRFSIGIDLGTTHCALSYIDLAASDGDAPQQQVLPIAQLTSPGAIGAPSLLPSFLYL CCCCEEEEEECCCHHHHHHHHEEECCCCCCCHHHCCCHHHHCCCCCCCCHHHHHHHEEC PHPGELTPGDLTLPWTATRDYAVGEMARSRGAGTPIRLVSSAKSWLCHPGVDRRAAILPN CCCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEECCC DAPPEVERVSPLEASVRYLAHLREAWDHAHPDAPFAAQAVTVTIPASFDPAARELTAEAA CCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHH QAAGYASTTLLEEPQAALYSWIQKSGGGWRKDVKVGDVILVVDVGGGTTDLSLIAVVERD HHCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCEECCEEEEEECCCCCCCEEEEEEEECC GKLELHRVAVGEHILLGGDNMDLALAHVVARKLAAQGTQADPWQLRALTYACRGAKEALL CCEEEEEEEECCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHH GDRTLDAVPLVVPSRGSKLIGGSIRTELTRAELTQILLDGFFPQVDAAARPAVRTRAGLT CCCCCCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHCCHH QLGLPYAQDAGITRHLAAFLGKQVGALAELGGQPAAPAGGASFLHPTAVLFNGGVFKSDL HHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCHHEECCCCCHHHH LTERVLTILNGWLAADGAAPARLLGGADLDLAVARGAAYYGYVKRGRGVRIRGGTARAYY HHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHCCCHHHHHHCCCCEEEEECCCCEEEE IAIESAMPAIPGMEPPVCALCVAPFGMEEGSDAALPEQEFGLVVGEPVTFRFFGSSVRRQ EEEECCCCCCCCCCCCHHEEEECCCCCCCCCCCCCCHHHCCEEECCCEEEEECCCHHHHH DQVGTLLDYWSADELQELEAIQATLPAEGRTPGEVVAVRLHARVTEAGTLELEAMPRGSG HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCC ERWKVEFDVRGGADA CEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12835416 [H]