| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is hssR [H]
Identifier: 238023722
GI number: 238023722
Start: 292136
End: 293173
Strand: Reverse
Name: hssR [H]
Synonym: bglu_2g02500
Alternate gene names: 238023722
Gene position: 293173-292136 (Counterclockwise)
Preceding gene: 238023723
Following gene: 238023710
Centisome position: 10.37
GC content: 70.52
Gene sequence:
>1038_bases TTGAAGTTTGCCGTATTAACGCCCAACGTCAGCATGTTTGAACGACTGCGCCAGCATTTTCTCGATGCCTCCGTCGAATG CATCCAATTCGAGGACGACGTCGCATTGGCGCGCGGCCTTTACCGCGACGATTACCGGGTGATCCTGGTCGACGCTGCCA CCGGCATTGACGGCACGCGCACCGTGTTCGCACGCCGCGCGTTCTATGGCGGCCGGCGGGCGCCGCTGCTGGTGGTCGGC ACGTTCACCGATCGCGACAGCCTCGAGCGCGCCTTCGACACCGGCGCCGACGACGTGGTGCTGGCGCCCTTCGACCGCAA CGAGCTGGCGGCCCGCGCCTTTCGCGCGATGCGCCGCGTGGAGGCGGAGCCCGCTCCGCGCGACGAGCAGCGCGTCACGC TCGGCGCCTATACGCTCGACCAGCAGGCCAGCACCGTGCAGATCGCGGGCCGCAACGTGCGCGTGACCACGCGCGAGTTC GCGATCGCCTGGCTGCTGTTCTCGCGCGCCGGCGAATACGTCACGCGCCGCCAGCTGGCGGGCGCGATCTGGGGCAGCAC GGAGGATATCGTCGGCCGGCGGCTGGAACAGCACATCTACAAGCTGCGCCGCAAACTGGAACTGACGGGAGAATCGGGCG TCGCGCTGCGCACCATGTATGCGCACGGCTACCGGATCGAGCAGACCGACGGCGTGGCGATCGACGCCGACGCGGAGGCG GCCCGGCACGCGCTGGCCGAGGCCCAGCTCGACAGCCTGGGGGTGCGCACGCCCGCGGCGGGGGCCGCCTGCGCACCGCA GCCCTGCGGTGGGCTGCCGTTGCCAGCCGATCGCGCAAACGTTGTCACGCCAGGCGCGGTGGCCACGGTGCATGCGCGCC ACAGCCTCACGGCCTCGCTCGCGCAGCCCTGGGCCTCGTATGCGAACCCGTGGCACATCGGCGCCACCATGATCGCGAAG GCCGTACACGACGACGGCGCCGCAGCCGGCCAGCCGCTGCGCGTGCCGACGCTGTCGGGCTCGTGCAGCGAAGGTTGA
Upstream 100 bases:
>100_bases ACAATAAGTTACACCCCTGGGTTTTCGATGCCTGTACTTTCGCTCCGTGCCAGTAGCCTGCCGATTCATTTCATGTCGGG ACAAGTAGAGGAGGTTCAGG
Downstream 100 bases:
>100_bases GCCTGCAACCACCGGGGCCGCCGGCCCCGCCGTCCCGCCATCCGCAACATCCCGCCGCCGGCGGGATGTTGTCGTTTACG CGGGCGCCGGCGGTGATGCC
Product: putative response regulator transcription regulator protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MKFAVLTPNVSMFERLRQHFLDASVECIQFEDDVALARGLYRDDYRVILVDAATGIDGTRTVFARRAFYGGRRAPLLVVG TFTDRDSLERAFDTGADDVVLAPFDRNELAARAFRAMRRVEAEPAPRDEQRVTLGAYTLDQQASTVQIAGRNVRVTTREF AIAWLLFSRAGEYVTRRQLAGAIWGSTEDIVGRRLEQHIYKLRRKLELTGESGVALRTMYAHGYRIEQTDGVAIDADAEA ARHALAEAQLDSLGVRTPAAGAACAPQPCGGLPLPADRANVVTPGAVATVHARHSLTASLAQPWASYANPWHIGATMIAK AVHDDGAAAGQPLRVPTLSGSCSEG
Sequences:
>Translated_345_residues MKFAVLTPNVSMFERLRQHFLDASVECIQFEDDVALARGLYRDDYRVILVDAATGIDGTRTVFARRAFYGGRRAPLLVVG TFTDRDSLERAFDTGADDVVLAPFDRNELAARAFRAMRRVEAEPAPRDEQRVTLGAYTLDQQASTVQIAGRNVRVTTREF AIAWLLFSRAGEYVTRRQLAGAIWGSTEDIVGRRLEQHIYKLRRKLELTGESGVALRTMYAHGYRIEQTDGVAIDADAEA ARHALAEAQLDSLGVRTPAAGAACAPQPCGGLPLPADRANVVTPGAVATVHARHSLTASLAQPWASYANPWHIGATMIAK AVHDDGAAAGQPLRVPTLSGSCSEG >Mature_345_residues MKFAVLTPNVSMFERLRQHFLDASVECIQFEDDVALARGLYRDDYRVILVDAATGIDGTRTVFARRAFYGGRRAPLLVVG TFTDRDSLERAFDTGADDVVLAPFDRNELAARAFRAMRRVEAEPAPRDEQRVTLGAYTLDQQASTVQIAGRNVRVTTREF AIAWLLFSRAGEYVTRRQLAGAIWGSTEDIVGRRLEQHIYKLRRKLELTGESGVALRTMYAHGYRIEQTDGVAIDADAEA ARHALAEAQLDSLGVRTPAAGAACAPQPCGGLPLPADRANVVTPGAVATVHARHSLTASLAQPWASYANPWHIGATMIAK AVHDDGAAAGQPLRVPTLSGSCSEG
Specific function: Member of the two-component regulatory system hssS/hssR involved in intracellular heme homeostasis and tempering of staphylococcal virulence. Phosphorylated hssR binds to a direct repeat sequence within hrtAB promoter and activates the expression of hrtAB
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI87082012, Length=176, Percent_Identity=30.1136363636364, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1789402, Length=191, Percent_Identity=29.3193717277487, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1786911, Length=154, Percent_Identity=30.5194805194805, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1786599, Length=155, Percent_Identity=25.8064516129032, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 37458; Mature: 37458
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFAVLTPNVSMFERLRQHFLDASVECIQFEDDVALARGLYRDDYRVILVDAATGIDGTR CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCCCCEEEEEEECCCCCCHH TVFARRAFYGGRRAPLLVVGTFTDRDSLERAFDTGADDVVLAPFDRNELAARAFRAMRRV HHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHH EAEPAPRDEQRVTLGAYTLDQQASTVQIAGRNVRVTTREFAIAWLLFSRAGEYVTRRQLA CCCCCCCCCCEEEEEEEEECCCCCEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH GAIWGSTEDIVGRRLEQHIYKLRRKLELTGESGVALRTMYAHGYRIEQTDGVAIDADAEA HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEECCCCEEEECCHHH ARHALAEAQLDSLGVRTPAAGAACAPQPCGGLPLPADRANVVTPGAVATVHARHSLTASL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEHHHHHHHHH AQPWASYANPWHIGATMIAKAVHDDGAAAGQPLRVPTLSGSCSEG HHHHHHHCCCEEHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC >Mature Secondary Structure MKFAVLTPNVSMFERLRQHFLDASVECIQFEDDVALARGLYRDDYRVILVDAATGIDGTR CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCCCCEEEEEEECCCCCCHH TVFARRAFYGGRRAPLLVVGTFTDRDSLERAFDTGADDVVLAPFDRNELAARAFRAMRRV HHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHH EAEPAPRDEQRVTLGAYTLDQQASTVQIAGRNVRVTTREFAIAWLLFSRAGEYVTRRQLA CCCCCCCCCCEEEEEEEEECCCCCEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH GAIWGSTEDIVGRRLEQHIYKLRRKLELTGESGVALRTMYAHGYRIEQTDGVAIDADAEA HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEECCCCEEEECCHHH ARHALAEAQLDSLGVRTPAAGAACAPQPCGGLPLPADRANVVTPGAVATVHARHSLTASL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEHHHHHHHHH AQPWASYANPWHIGATMIAKAVHDDGAAAGQPLRVPTLSGSCSEG HHHHHHHCCCEEHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA