| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023698
Identifier: 238023698
GI number: 238023698
Start: 262748
End: 263323
Strand: Reverse
Name: 238023698
Synonym: bglu_2g02240
Alternate gene names: NA
Gene position: 263323-262748 (Counterclockwise)
Preceding gene: 238023699
Following gene: 238023697
Centisome position: 9.31
GC content: 72.22
Gene sequence:
>576_bases ATGACCGATCTGTGCGACCGAATCTGGACCCTGCTCGAAGAAGGCGCCGGCGCCGGCCGCGAGCGCTCGCCGTTCACCAT GCTGCAAGCGGCCACGCTCGGGCTCGACGGCGCACCGAAGGTGCGCACCGTGGTGCTGCGCGGCGCCGACCGCCAGGCGC GCACGCTGATGTTCCATACCGACGCGCGCGCCGCGAAGGTTGCCGAGCTGGCACGCGACGCGCGTATCGCGCTGGTCGGC TGCGATCTGGCCAACGGCCTGCAGATCCGTGTCGAAGGCACGGCGACCCGGCGCACCGATACCGCCGGGCGCCTCGCGAT CTGGCGTGCCAGCCGCCCCCGCACGCTGGTTCTTTATCGCGCACCGCTGCCGCCGGGCACACCGGTTGCGACGCCGGCCG ACGCGCAGCCGTGCGCCGCCGGCAACGACGCATCGCTCGACGGCTTCGAACATTTCGCCGTGTTCGACGTGCATGTCGCA GCGCTCGACTGGCTCGATCTATCCCGCGACGGCCACCAGCGCGCGCGGCTCGTGTTCGGCGCGAACGGCTGGCAGGCCGG CTGGATCGCGCCCTGA
Upstream 100 bases:
>100_bases CGCTCCAGCGCGGCGCGCCGGCTGGCGATTGACCGCCTCGGCGGCGCTCGCTATCGTGGTCGATCCCGCCGGACCCGGCG GAAACGACCACGCCCCCACC
Downstream 100 bases:
>100_bases TCGCGCCGACGGCGAAGACGCCGCGTTCGACGCGCGGCTCGCGCATCCGTGCGATACCCTGCCCGTCGGTCACCGCGTCG ATCGCCGGCGACGGCGCGGT
Product: pyridoxamine 5'-phosphate oxidase family protein
Products: NA
Alternate protein names: Pyridoxamine 5-Phosphate Oxidase Family Protein
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MTDLCDRIWTLLEEGAGAGRERSPFTMLQAATLGLDGAPKVRTVVLRGADRQARTLMFHTDARAAKVAELARDARIALVG CDLANGLQIRVEGTATRRTDTAGRLAIWRASRPRTLVLYRAPLPPGTPVATPADAQPCAAGNDASLDGFEHFAVFDVHVA ALDWLDLSRDGHQRARLVFGANGWQAGWIAP
Sequences:
>Translated_191_residues MTDLCDRIWTLLEEGAGAGRERSPFTMLQAATLGLDGAPKVRTVVLRGADRQARTLMFHTDARAAKVAELARDARIALVG CDLANGLQIRVEGTATRRTDTAGRLAIWRASRPRTLVLYRAPLPPGTPVATPADAQPCAAGNDASLDGFEHFAVFDVHVA ALDWLDLSRDGHQRARLVFGANGWQAGWIAP >Mature_190_residues TDLCDRIWTLLEEGAGAGRERSPFTMLQAATLGLDGAPKVRTVVLRGADRQARTLMFHTDARAAKVAELARDARIALVGC DLANGLQIRVEGTATRRTDTAGRLAIWRASRPRTLVLYRAPLPPGTPVATPADAQPCAAGNDASLDGFEHFAVFDVHVAA LDWLDLSRDGHQRARLVFGANGWQAGWIAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20578; Mature: 20446
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLCDRIWTLLEEGAGAGRERSPFTMLQAATLGLDGAPKVRTVVLRGADRQARTLMFHT CCHHHHHHHHHHHHCCCCCCCCCCHHEEEHHHCCCCCCCCEEEEEEECCCCCCEEEEEEC DARAAKVAELARDARIALVGCDLANGLQIRVEGTATRRTDTAGRLAIWRASRPRTLVLYR CCHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEE APLPPGTPVATPADAQPCAAGNDASLDGFEHFAVFDVHVAALDWLDLSRDGHQRARLVFG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEHECCCCCCCCEEEEEEE ANGWQAGWIAP CCCCCCCCCCC >Mature Secondary Structure TDLCDRIWTLLEEGAGAGRERSPFTMLQAATLGLDGAPKVRTVVLRGADRQARTLMFHT CHHHHHHHHHHHHCCCCCCCCCCHHEEEHHHCCCCCCCCEEEEEEECCCCCCEEEEEEC DARAAKVAELARDARIALVGCDLANGLQIRVEGTATRRTDTAGRLAIWRASRPRTLVLYR CCHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEE APLPPGTPVATPADAQPCAAGNDASLDGFEHFAVFDVHVAALDWLDLSRDGHQRARLVFG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEHECCCCCCCCEEEEEEE ANGWQAGWIAP CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA