| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023693
Identifier: 238023693
GI number: 238023693
Start: 253964
End: 255535
Strand: Direct
Name: 238023693
Synonym: bglu_2g02180
Alternate gene names: NA
Gene position: 253964-255535 (Clockwise)
Preceding gene: 238023692
Following gene: 238023694
Centisome position: 8.98
GC content: 55.09
Gene sequence:
>1572_bases ATGGCAGGCATCATTCGAATCGGTGATAGACGCACTGCGGGCGGCGTTGTACCGGTGCACTCAGCAGCGCGCTCTTTCAT GACGCACGCAATTGCGTGTCTTTATCATCCCGTCACCGAACCGGAGCATGGGGACAGTCGAATCGCACCCGCCATGTCCG GCCCATTCGGCGATGGTATCGAGATCGCACAACACAACGATCTGTGTAAATGCACATGCGACCTGATTTCCTCGTTGCCG GACAGCGAACGCCGTTGGTCAGGCATTCATCGCGTTTGGGACGACCACACGTTTCAGATCCGTCGTTCCACCGATGCCTC GCTGTCCGAACGACAGAAAATGAGTGGCTACCGCCGTGTTTGCATGGTCATTGCCGCTCTCGTCGTTACAGTCAGTGGCA GCGCGATGCTGACTGCCTGCAAAAGCACTCTGCCGCCTGGAGAATCTGTCTTGATGAATATCGACAGTTCGTACGGACGG GCAGACCGGTTGGATACTTCTGCGCTTGCCATTGATGGACGGTTGACGGAAGCTGATGATGGCCGCTTGTATTGGACATC ACCGAAGGCGGGAACTGACCGTTTCGGCGCCATCTTTCGCATGACGAAAGATGGGCATGTGTCGCTTGTCTATTCGTTTA ATCAGCCGGACGTCGACGCTGCTGAGCCAATTAACGGTGTGTTTCAGGCCTCGGACGGAAATTTCTATGGAACAACTCAC ACCGATAAGAACCACACAAAGACTGGAACACTGTTTCGCCTTACTCCGGGAGGGAAAGTTACCATTCTGCACACGTTTGG AGTAAAGCAATCCGAACCGCAATTGCCCAATAGCCTTCTTGTGGAAGATCATGGCGGAACCCTTTATGGCACAACGATAC GCGGTGGTCCCTCCGACAGCGGCGCGGTCTATCGCATCACCCGATCAGGCGAGTTCTCGGTGCTGCATTTCTTCGAGCCA GATAAGCGGAATGGTGCCGAACCGGGAGGCGATCTTACACTCGGATTTGACGGGAATCTATACGGTACAACAAGGGCCGG GGGCAAAGAGAATCGGGGAACGCTGTATCGGTTAAGCCGATCCGGGGAATTCACGGTACTGCATTCCTTCGCCGTGTTCG ACGATGACGGCCAGAACCCTGGAACCGGCGTTGTACAAGGGAAGGACGGCAGTCTGTATGGAACGACTGCCGTCGGTGGA CAAAATGGTAGTGGGACAATTTTCCGGTTTTCGCCTAGCGGAAAATACACGATTGTGTATTCATTTCCACCGGCGAGTTC GATAGGCGTAGGCCCTTCATCGATTGTAGTCGGAAGTGACGGCTACCTTTATGGAACAACGTGCTCCGGCGGGACCAACA AGATTGGTTACGATTCGGCGGGCCAATTCTACCGCGTGAGCCCGCATGGCGAGATGACGTCGCTGTACTCCTTCGGAGCC ACGTCAGTCGACGGCACCTGTCCGAGCAAAGAACGCCTCGTGGTCGGAAAGGATGGCTACTTTTACGGCGTCACGTTCGC AGGAGGCTCACACGACCTGGGTACGGTTTATCGAATGGTGGTTCCAAAGTGA
Upstream 100 bases:
>100_bases ACGCCGCCCCCCCCGGATATCGGGTCGTCTTTGAGCGCGTCTCAATAGCACACCGTTATCGAAAGCTCAGTGGCGGCAGC AGTTCAACGTGGGGAGCAAT
Downstream 100 bases:
>100_bases TCTTCAACACTGCGTGCAAAACATCGATTGCGGGGATGCGGTGTATGCAGGCTTGCTGCTTCAGCGACGTTTATAGGGGA GATTAATATGCCAGGCATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 523; Mature: 522
Protein sequence:
>523_residues MAGIIRIGDRRTAGGVVPVHSAARSFMTHAIACLYHPVTEPEHGDSRIAPAMSGPFGDGIEIAQHNDLCKCTCDLISSLP DSERRWSGIHRVWDDHTFQIRRSTDASLSERQKMSGYRRVCMVIAALVVTVSGSAMLTACKSTLPPGESVLMNIDSSYGR ADRLDTSALAIDGRLTEADDGRLYWTSPKAGTDRFGAIFRMTKDGHVSLVYSFNQPDVDAAEPINGVFQASDGNFYGTTH TDKNHTKTGTLFRLTPGGKVTILHTFGVKQSEPQLPNSLLVEDHGGTLYGTTIRGGPSDSGAVYRITRSGEFSVLHFFEP DKRNGAEPGGDLTLGFDGNLYGTTRAGGKENRGTLYRLSRSGEFTVLHSFAVFDDDGQNPGTGVVQGKDGSLYGTTAVGG QNGSGTIFRFSPSGKYTIVYSFPPASSIGVGPSSIVVGSDGYLYGTTCSGGTNKIGYDSAGQFYRVSPHGEMTSLYSFGA TSVDGTCPSKERLVVGKDGYFYGVTFAGGSHDLGTVYRMVVPK
Sequences:
>Translated_523_residues MAGIIRIGDRRTAGGVVPVHSAARSFMTHAIACLYHPVTEPEHGDSRIAPAMSGPFGDGIEIAQHNDLCKCTCDLISSLP DSERRWSGIHRVWDDHTFQIRRSTDASLSERQKMSGYRRVCMVIAALVVTVSGSAMLTACKSTLPPGESVLMNIDSSYGR ADRLDTSALAIDGRLTEADDGRLYWTSPKAGTDRFGAIFRMTKDGHVSLVYSFNQPDVDAAEPINGVFQASDGNFYGTTH TDKNHTKTGTLFRLTPGGKVTILHTFGVKQSEPQLPNSLLVEDHGGTLYGTTIRGGPSDSGAVYRITRSGEFSVLHFFEP DKRNGAEPGGDLTLGFDGNLYGTTRAGGKENRGTLYRLSRSGEFTVLHSFAVFDDDGQNPGTGVVQGKDGSLYGTTAVGG QNGSGTIFRFSPSGKYTIVYSFPPASSIGVGPSSIVVGSDGYLYGTTCSGGTNKIGYDSAGQFYRVSPHGEMTSLYSFGA TSVDGTCPSKERLVVGKDGYFYGVTFAGGSHDLGTVYRMVVPK >Mature_522_residues AGIIRIGDRRTAGGVVPVHSAARSFMTHAIACLYHPVTEPEHGDSRIAPAMSGPFGDGIEIAQHNDLCKCTCDLISSLPD SERRWSGIHRVWDDHTFQIRRSTDASLSERQKMSGYRRVCMVIAALVVTVSGSAMLTACKSTLPPGESVLMNIDSSYGRA DRLDTSALAIDGRLTEADDGRLYWTSPKAGTDRFGAIFRMTKDGHVSLVYSFNQPDVDAAEPINGVFQASDGNFYGTTHT DKNHTKTGTLFRLTPGGKVTILHTFGVKQSEPQLPNSLLVEDHGGTLYGTTIRGGPSDSGAVYRITRSGEFSVLHFFEPD KRNGAEPGGDLTLGFDGNLYGTTRAGGKENRGTLYRLSRSGEFTVLHSFAVFDDDGQNPGTGVVQGKDGSLYGTTAVGGQ NGSGTIFRFSPSGKYTIVYSFPPASSIGVGPSSIVVGSDGYLYGTTCSGGTNKIGYDSAGQFYRVSPHGEMTSLYSFGAT SVDGTCPSKERLVVGKDGYFYGVTFAGGSHDLGTVYRMVVPK
Specific function: Unknown
COG id: COG4104
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55822; Mature: 55691
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGIIRIGDRRTAGGVVPVHSAARSFMTHAIACLYHPVTEPEHGDSRIAPAMSGPFGDGI CCCEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCE EIAQHNDLCKCTCDLISSLPDSERRWSGIHRVWDDHTFQIRRSTDASLSERQKMSGYRRV EEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHH CMVIAALVVTVSGSAMLTACKSTLPPGESVLMNIDSSYGRADRLDTSALAIDGRLTEADD HHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEECCEEEECCC GRLYWTSPKAGTDRFGAIFRMTKDGHVSLVYSFNQPDVDAAEPINGVFQASDGNFYGTTH CEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEECCCCCEEECCC TDKNHTKTGTLFRLTPGGKVTILHTFGVKQSEPQLPNSLLVEDHGGTLYGTTIRGGPSDS CCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCC GAVYRITRSGEFSVLHFFEPDKRNGAEPGGDLTLGFDGNLYGTTRAGGKENRGTLYRLSR CCEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCEEEEEEC SGEFTVLHSFAVFDDDGQNPGTGVVQGKDGSLYGTTAVGGQNGSGTIFRFSPSGKYTIVY CCCEEEEEEEEEECCCCCCCCCEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCEEEEE SFPPASSIGVGPSSIVVGSDGYLYGTTCSGGTNKIGYDSAGQFYRVSPHGEMTSLYSFGA ECCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEHHEECCC TSVDGTCPSKERLVVGKDGYFYGVTFAGGSHDLGTVYRMVVPK CCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCEEEEECCC >Mature Secondary Structure AGIIRIGDRRTAGGVVPVHSAARSFMTHAIACLYHPVTEPEHGDSRIAPAMSGPFGDGI CCEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCE EIAQHNDLCKCTCDLISSLPDSERRWSGIHRVWDDHTFQIRRSTDASLSERQKMSGYRRV EEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHH CMVIAALVVTVSGSAMLTACKSTLPPGESVLMNIDSSYGRADRLDTSALAIDGRLTEADD HHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEECCEEEECCC GRLYWTSPKAGTDRFGAIFRMTKDGHVSLVYSFNQPDVDAAEPINGVFQASDGNFYGTTH CEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEECCCCCEEECCC TDKNHTKTGTLFRLTPGGKVTILHTFGVKQSEPQLPNSLLVEDHGGTLYGTTIRGGPSDS CCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCC GAVYRITRSGEFSVLHFFEPDKRNGAEPGGDLTLGFDGNLYGTTRAGGKENRGTLYRLSR CCEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCEEEEEEC SGEFTVLHSFAVFDDDGQNPGTGVVQGKDGSLYGTTAVGGQNGSGTIFRFSPSGKYTIVY CCCEEEEEEEEEECCCCCCCCCEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCEEEEE SFPPASSIGVGPSSIVVGSDGYLYGTTCSGGTNKIGYDSAGQFYRVSPHGEMTSLYSFGA ECCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEHHEECCC TSVDGTCPSKERLVVGKDGYFYGVTFAGGSHDLGTVYRMVVPK CCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA