| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023691
Identifier: 238023691
GI number: 238023691
Start: 250866
End: 251663
Strand: Direct
Name: 238023691
Synonym: bglu_2g02160
Alternate gene names: NA
Gene position: 250866-251663 (Clockwise)
Preceding gene: 238023690
Following gene: 238023692
Centisome position: 8.87
GC content: 52.51
Gene sequence:
>798_bases ATGATGAGCGTGATCAAACGGATAATTCTCCTGTTCGTGGCGTTGTCACTGGCGGGCTGCGACGCATTTTCCTCGGAACC GGTCTATAGCGGGATCAGTGTGGAAGGGATGAATTACACCCCGTTCAATCTCACCAAATTCGTGATTCGGGACAAATATG GCAACACTGCCAGCGGTGGAGGGGATCTCATGCCCGGTGCTGGTGAGGGCAGTTTGAGCTGCTGCTACAAGCTGAAAGGA ACGGACTTCACGGTCGACTGGGAAATTTACGATGCTGATGAAGCGATTAAGAACATTTACGCGCCTATCAAGAAAATTCA CAAGACAACGCAGGTGCATTTCCCCAAGACGAAGATCTCTGGCGGTGCCGGGGAGGTGGTGCTGGCTGTGCACTTCTACC CGGATTATCACATTGAGTTTGAATTCCGGGATGACCTTAGTGGTAGCCGAATTGATTATTCGGCGGTCGATTACTGGTTC CAAACAAAATATGGGAAAGCGGCGAATCCTGACGGGCTTGATGAGGCTTCTGCGTTTCGGCGAACCGCACGCGTCGCGGC GCAAGGCTGGCTGAAATACCGGCTGACTGACTCGGCAGATCTGGAGCAATACGTGTACTACACGCTGCTCGTCAACCCGA AGTTTGACGAGCATCCAGCCGTGCAACGCATCCTTCAGGAAACAAAAGGTAAACCCGGTGCATTCGGCGTTGCGATTCAG AAACTGCCCGATACCGTCGTTCAGGAAATCAAGAGCAACCATTTTGAGCATGTACTGACAGGAGCCGACCATGGCTGA
Upstream 100 bases:
>100_bases GCGAGATTACTTACCGCGATGCCTTGACCGGCATCGATCGTGAGGTACTGCGCCAGGCTTCCCGCATGCACGAACAGCCC AATTCACAAGCGAGCTAAAC
Downstream 100 bases:
>100_bases CACGACTCAACTCGATCCCGCCGACCGGACATCAATAGACGTGCAGACTGCAATCGGTGAAAAGCGGAGAGCATATCCGA CCGACGCTTGTATTCCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MMSVIKRIILLFVALSLAGCDAFSSEPVYSGISVEGMNYTPFNLTKFVIRDKYGNTASGGGDLMPGAGEGSLSCCYKLKG TDFTVDWEIYDADEAIKNIYAPIKKIHKTTQVHFPKTKISGGAGEVVLAVHFYPDYHIEFEFRDDLSGSRIDYSAVDYWF QTKYGKAANPDGLDEASAFRRTARVAAQGWLKYRLTDSADLEQYVYYTLLVNPKFDEHPAVQRILQETKGKPGAFGVAIQ KLPDTVVQEIKSNHFEHVLTGADHG
Sequences:
>Translated_265_residues MMSVIKRIILLFVALSLAGCDAFSSEPVYSGISVEGMNYTPFNLTKFVIRDKYGNTASGGGDLMPGAGEGSLSCCYKLKG TDFTVDWEIYDADEAIKNIYAPIKKIHKTTQVHFPKTKISGGAGEVVLAVHFYPDYHIEFEFRDDLSGSRIDYSAVDYWF QTKYGKAANPDGLDEASAFRRTARVAAQGWLKYRLTDSADLEQYVYYTLLVNPKFDEHPAVQRILQETKGKPGAFGVAIQ KLPDTVVQEIKSNHFEHVLTGADHG >Mature_265_residues MMSVIKRIILLFVALSLAGCDAFSSEPVYSGISVEGMNYTPFNLTKFVIRDKYGNTASGGGDLMPGAGEGSLSCCYKLKG TDFTVDWEIYDADEAIKNIYAPIKKIHKTTQVHFPKTKISGGAGEVVLAVHFYPDYHIEFEFRDDLSGSRIDYSAVDYWF QTKYGKAANPDGLDEASAFRRTARVAAQGWLKYRLTDSADLEQYVYYTLLVNPKFDEHPAVQRILQETKGKPGAFGVAIQ KLPDTVVQEIKSNHFEHVLTGADHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29445; Mature: 29445
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSVIKRIILLFVALSLAGCDAFSSEPVYSGISVEGMNYTPFNLTKFVIRDKYGNTASGG CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCHHEEEEEECCCCCCCCCC GDLMPGAGEGSLSCCYKLKGTDFTVDWEIYDADEAIKNIYAPIKKIHKTTQVHFPKTKIS CCCCCCCCCCCEEEEEEECCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHEEECCCCCCC GGAGEVVLAVHFYPDYHIEFEFRDDLSGSRIDYSAVDYWFQTKYGKAANPDGLDEASAFR CCCCEEEEEEEECCCEEEEEEECCCCCCCEECHHHHHHHHHCCCCCCCCCCCCHHHHHHH RTARVAAQGWLKYRLTDSADLEQYVYYTLLVNPKFDEHPAVQRILQETKGKPGAFGVAIQ HHHHHHHHCEEEEEECCCCCHHEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHH KLPDTVVQEIKSNHFEHVLTGADHG HHHHHHHHHHHHCCHHHHHCCCCCC >Mature Secondary Structure MMSVIKRIILLFVALSLAGCDAFSSEPVYSGISVEGMNYTPFNLTKFVIRDKYGNTASGG CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCHHEEEEEECCCCCCCCCC GDLMPGAGEGSLSCCYKLKGTDFTVDWEIYDADEAIKNIYAPIKKIHKTTQVHFPKTKIS CCCCCCCCCCCEEEEEEECCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHEEECCCCCCC GGAGEVVLAVHFYPDYHIEFEFRDDLSGSRIDYSAVDYWFQTKYGKAANPDGLDEASAFR CCCCEEEEEEEECCCEEEEEEECCCCCCCEECHHHHHHHHHCCCCCCCCCCCCHHHHHHH RTARVAAQGWLKYRLTDSADLEQYVYYTLLVNPKFDEHPAVQRILQETKGKPGAFGVAIQ HHHHHHHHCEEEEEECCCCCHHEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHH KLPDTVVQEIKSNHFEHVLTGADHG HHHHHHHHHHHHCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA