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The map label for this gene is yfdX [H]

Identifier: 238023685

GI number: 238023685

Start: 240629

End: 241309

Strand: Reverse

Name: yfdX [H]

Synonym: bglu_2g02080

Alternate gene names: 238023685

Gene position: 241309-240629 (Counterclockwise)

Preceding gene: 238023697

Following gene: 238023684

Centisome position: 8.53

GC content: 61.82

Gene sequence:

>681_bases
ATGCGAATCCAGACCAAAAGGAAGGCAGCAGCTTGCTTGATGGCGGCAATTACCGTGGCGGTCGGTGCCTGGCCGGTCCA
TTACGCGTTCGCGTCAACCGTCGGGCAGACCGTCATGAAGCAGGACTTCACCAAGCTGTCCGACGCGGGAAGCCATGCCA
TGAACGATGTGGGAGCGGCACGTTCGGCGCTCTTCAATGGCGATCCGGAGGATGCGGCGCGTTTGCTGAGTCAGGCCAAA
GTCGCGATGAAAGCCGCTGCCACCGATGATTCGGCATTTCTCCGTGCGGCATCATCGCTGACCGATGCAGCCGGAAAACA
CCCGAGCGCGTCCAGTGATACCCGATCAGCATGGCTTCCGGTCGCCGGCGAGGTGTCGATCCTGGACGACTTCGCCAGCC
AACCGGCCAAGGCCAAAGCCGTCGATCACGCGAATGCGGCCTTGAAGAACGGTGACCGCTCGGCGGCGATCCGCGCGCTC
AAGCTCGCCGATGTCAACGTCGATTACACCGTCGACGTGGTTCCGCTGGCCAAGACGGGGGCGAGGATCGATCAAGCTTC
GGCGCTGCTGGATGCGGGCAAATACTACGAAGCCGGACAGGTGCTGCGCCAGATACAGAACAGCGTGCGGTTCGATCATC
TCGACATCAATGCGATACCGCAGAACGCGGGCCGTGGTTGA

Upstream 100 bases:

>100_bases
AATTCTCCCAACCTATCTTGGCAGCACCGAATAGATGTTTCGTGTGAAGGCCGATCCCGGTGTCGTCATCCCAATCGATG
TTCTTGAAAGGAGAGTTGAA

Downstream 100 bases:

>100_bases
CAGCCATCCGCCGTCGAAGGGGGCCGGGCGTTCGGCCGCCTTGCCGATCTCCGGACAAGTACGGGTTTGGGCCGGTCCGC
TCAGGCCCGGCCTGCCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MRIQTKRKAAACLMAAITVAVGAWPVHYAFASTVGQTVMKQDFTKLSDAGSHAMNDVGAARSALFNGDPEDAARLLSQAK
VAMKAAATDDSAFLRAASSLTDAAGKHPSASSDTRSAWLPVAGEVSILDDFASQPAKAKAVDHANAALKNGDRSAAIRAL
KLADVNVDYTVDVVPLAKTGARIDQASALLDAGKYYEAGQVLRQIQNSVRFDHLDINAIPQNAGRG

Sequences:

>Translated_226_residues
MRIQTKRKAAACLMAAITVAVGAWPVHYAFASTVGQTVMKQDFTKLSDAGSHAMNDVGAARSALFNGDPEDAARLLSQAK
VAMKAAATDDSAFLRAASSLTDAAGKHPSASSDTRSAWLPVAGEVSILDDFASQPAKAKAVDHANAALKNGDRSAAIRAL
KLADVNVDYTVDVVPLAKTGARIDQASALLDAGKYYEAGQVLRQIQNSVRFDHLDINAIPQNAGRG
>Mature_226_residues
MRIQTKRKAAACLMAAITVAVGAWPVHYAFASTVGQTVMKQDFTKLSDAGSHAMNDVGAARSALFNGDPEDAARLLSQAK
VAMKAAATDDSAFLRAASSLTDAAGKHPSASSDTRSAWLPVAGEVSILDDFASQPAKAKAVDHANAALKNGDRSAAIRAL
KLADVNVDYTVDVVPLAKTGARIDQASALLDAGKYYEAGQVLRQIQNSVRFDHLDINAIPQNAGRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788719, Length=168, Percent_Identity=30.3571428571429, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021236 [H]

Pfam domain/function: PF10938 YfdX [H]

EC number: NA

Molecular weight: Translated: 23634; Mature: 23634

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIQTKRKAAACLMAAITVAVGAWPVHYAFASTVGQTVMKQDFTKLSDAGSHAMNDVGAA
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSALFNGDPEDAARLLSQAKVAMKAAATDDSAFLRAASSLTDAAGKHPSASSDTRSAWLP
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
VAGEVSILDDFASQPAKAKAVDHANAALKNGDRSAAIRALKLADVNVDYTVDVVPLAKTG
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCEEEEEEECCCCC
ARIDQASALLDAGKYYEAGQVLRQIQNSVRFDHLDINAIPQNAGRG
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRIQTKRKAAACLMAAITVAVGAWPVHYAFASTVGQTVMKQDFTKLSDAGSHAMNDVGAA
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSALFNGDPEDAARLLSQAKVAMKAAATDDSAFLRAASSLTDAAGKHPSASSDTRSAWLP
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
VAGEVSILDDFASQPAKAKAVDHANAALKNGDRSAAIRALKLADVNVDYTVDVVPLAKTG
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCEEEEEEECCCCC
ARIDQASALLDAGKYYEAGQVLRQIQNSVRFDHLDINAIPQNAGRG
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]