| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023657
Identifier: 238023657
GI number: 238023657
Start: 198483
End: 199634
Strand: Direct
Name: 238023657
Synonym: bglu_2g01720
Alternate gene names: NA
Gene position: 198483-199634 (Clockwise)
Preceding gene: 238023656
Following gene: 238023658
Centisome position: 7.02
GC content: 64.06
Gene sequence:
>1152_bases ATGTCCGATATTCCCGTCCGTGACGTCCAGAACGGCAGCAAGCGTCTCGTGGTGGGCGTCTCGCTGTACGTGCGCGGCGC CGGCCAGTCGCTGTGGGAAAACGGCATCTTCCAGAACTGTCTGCTGCTGGTGCTGCTGTTGCGGCAGTCGCCGCTGGTGG CCGAGGCGGTGATGGTGAACGGCGCCGGCACCGAGCCGGCCGATCCGCAGATGATGCTGGATGAATGGAGCGTGCCGCTG ATCTCGATGGACGAGGCGATGGCGCGCTGCGACGTGCTGATCGAGATGAGCGCGCTGTTCAACGCCGACTGGCTCTCGGT ATTCCGCAAGCGCGGCGGCAAGGTGATCACGATGCGGGTGGGCAACGACTACGTGATCGATATCGAGCGTGCCATGTTCG ACAAGCCGCCAGGCTTTCTGTTCTCGGGCGCGCAGTACGACGGCGTCTGGACGATTCCGGAATTCGAGCACTCGTGCCGC CACTATCTGCAAACGGGGCTGCGCCAGAAGGTGACGATCGTCCCGCACATCTGGCATCCGATGCTGTTCGACAAGGCGCG CGGCGCGCTCGAGACGGGCCGCGCGTTCGGCTATCGCCCGGGCCGCTCGCGCTGGCGCATCGCGATGTTCGAGCCGAACA TCTGCATGGTGAAGACGAGCATCATCCCGATGCTGGTGGCCGAGGAAGCGTATCGCGCGCAGCCGTCGTTCGTGGAGTTC GTGCGGGTATGCAACACGCTGCACCTGAAGGACCACACCACCTTCGTGCATTTCGCGCGCAGCCTCGACCTCGTCAATCA CGGCCTGGCCAGCTTCGAGGGCCGCTTCGCGATCTACGAATTCATGTCGCAATACGGCGACGCCGTGGTCTCCCACACGT GGGAGAACGCCCAGAACTACCTCTATTACGAGCTGCTGTATGGCGGCTATCCGCTCGTCCACAACTCGCCCTACCTGGGC GAATGCGGCTACTACTATCCGGACTTCGATTGCCAGGAAGGCGGCCGGCAGTTGCTGCGCGCGTACCGCGAGCACGACGC GAATCTCGATGCCTACCGCGAGCGCACCGCCCGTTTGCTGCACTCGGTCGACATCCACAACCCCGACAACGTGGCGGCCT ACACCGAAGCGCTCGCCGCGGTCTATCGCTGA
Upstream 100 bases:
>100_bases CCGACGCGATGCTGCGGCGCGTCTCGATCGATAATCCGGCGAATCTCGACGCCTACGTCGAACGCCTGTTGGCCTGAGCG ATTTCAGCGGGAGAACCTGC
Downstream 100 bases:
>100_bases CGCGCGGCCTTGCCGCCCCTTTCACGCCTTTCGAACCAGCCAGGAGGCCTCTTGAAAGCGACTCTAGTACGATGCGCGGC CGCATGCTTGGCCGCCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MSDIPVRDVQNGSKRLVVGVSLYVRGAGQSLWENGIFQNCLLLVLLLRQSPLVAEAVMVNGAGTEPADPQMMLDEWSVPL ISMDEAMARCDVLIEMSALFNADWLSVFRKRGGKVITMRVGNDYVIDIERAMFDKPPGFLFSGAQYDGVWTIPEFEHSCR HYLQTGLRQKVTIVPHIWHPMLFDKARGALETGRAFGYRPGRSRWRIAMFEPNICMVKTSIIPMLVAEEAYRAQPSFVEF VRVCNTLHLKDHTTFVHFARSLDLVNHGLASFEGRFAIYEFMSQYGDAVVSHTWENAQNYLYYELLYGGYPLVHNSPYLG ECGYYYPDFDCQEGGRQLLRAYREHDANLDAYRERTARLLHSVDIHNPDNVAAYTEALAAVYR
Sequences:
>Translated_383_residues MSDIPVRDVQNGSKRLVVGVSLYVRGAGQSLWENGIFQNCLLLVLLLRQSPLVAEAVMVNGAGTEPADPQMMLDEWSVPL ISMDEAMARCDVLIEMSALFNADWLSVFRKRGGKVITMRVGNDYVIDIERAMFDKPPGFLFSGAQYDGVWTIPEFEHSCR HYLQTGLRQKVTIVPHIWHPMLFDKARGALETGRAFGYRPGRSRWRIAMFEPNICMVKTSIIPMLVAEEAYRAQPSFVEF VRVCNTLHLKDHTTFVHFARSLDLVNHGLASFEGRFAIYEFMSQYGDAVVSHTWENAQNYLYYELLYGGYPLVHNSPYLG ECGYYYPDFDCQEGGRQLLRAYREHDANLDAYRERTARLLHSVDIHNPDNVAAYTEALAAVYR >Mature_382_residues SDIPVRDVQNGSKRLVVGVSLYVRGAGQSLWENGIFQNCLLLVLLLRQSPLVAEAVMVNGAGTEPADPQMMLDEWSVPLI SMDEAMARCDVLIEMSALFNADWLSVFRKRGGKVITMRVGNDYVIDIERAMFDKPPGFLFSGAQYDGVWTIPEFEHSCRH YLQTGLRQKVTIVPHIWHPMLFDKARGALETGRAFGYRPGRSRWRIAMFEPNICMVKTSIIPMLVAEEAYRAQPSFVEFV RVCNTLHLKDHTTFVHFARSLDLVNHGLASFEGRFAIYEFMSQYGDAVVSHTWENAQNYLYYELLYGGYPLVHNSPYLGE CGYYYPDFDCQEGGRQLLRAYREHDANLDAYRERTARLLHSVDIHNPDNVAAYTEALAAVYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43690; Mature: 43559
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIPVRDVQNGSKRLVVGVSLYVRGAGQSLWENGIFQNCLLLVLLLRQSPLVAEAVMVN CCCCCCCCCCCCCCEEEEEEEEEEECCCHHHHHCCHHHHHHHHHHHHHCCCCHHHEEEEC GAGTEPADPQMMLDEWSVPLISMDEAMARCDVLIEMSALFNADWLSVFRKRGGKVITMRV CCCCCCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCEEEEEEE GNDYVIDIERAMFDKPPGFLFSGAQYDGVWTIPEFEHSCRHYLQTGLRQKVTIVPHIWHP CCCEEEEEHHHHCCCCCCCEECCCCCCCEECCCHHHHHHHHHHHHCCCCEEEEECHHHHH MLFDKARGALETGRAFGYRPGRSRWRIAMFEPNICMVKTSIIPMLVAEEAYRAQPSFVEF HHHHHHCCHHHHCCCCCCCCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHCCCCHHHHH VRVCNTLHLKDHTTFVHFARSLDLVNHGLASFEGRFAIYEFMSQYGDAVVSHTWENAQNY HHHHHHEECCCCHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCE LYYELLYGGYPLVHNSPYLGECGYYYPDFDCQEGGRQLLRAYREHDANLDAYRERTARLL EEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH HSVDIHNPDNVAAYTEALAAVYR HHCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SDIPVRDVQNGSKRLVVGVSLYVRGAGQSLWENGIFQNCLLLVLLLRQSPLVAEAVMVN CCCCCCCCCCCCCEEEEEEEEEEECCCHHHHHCCHHHHHHHHHHHHHCCCCHHHEEEEC GAGTEPADPQMMLDEWSVPLISMDEAMARCDVLIEMSALFNADWLSVFRKRGGKVITMRV CCCCCCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCEEEEEEE GNDYVIDIERAMFDKPPGFLFSGAQYDGVWTIPEFEHSCRHYLQTGLRQKVTIVPHIWHP CCCEEEEEHHHHCCCCCCCEECCCCCCCEECCCHHHHHHHHHHHHCCCCEEEEECHHHHH MLFDKARGALETGRAFGYRPGRSRWRIAMFEPNICMVKTSIIPMLVAEEAYRAQPSFVEF HHHHHHCCHHHHCCCCCCCCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHCCCCHHHHH VRVCNTLHLKDHTTFVHFARSLDLVNHGLASFEGRFAIYEFMSQYGDAVVSHTWENAQNY HHHHHHEECCCCHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCE LYYELLYGGYPLVHNSPYLGECGYYYPDFDCQEGGRQLLRAYREHDANLDAYRERTARLL EEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH HSVDIHNPDNVAAYTEALAAVYR HHCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA