| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023651
Identifier: 238023651
GI number: 238023651
Start: 183782
End: 184969
Strand: Reverse
Name: 238023651
Synonym: bglu_2g01600
Alternate gene names: NA
Gene position: 184969-183782 (Counterclockwise)
Preceding gene: 238023661
Following gene: 238023650
Centisome position: 6.54
GC content: 67.76
Gene sequence:
>1188_bases ATGACCGATTATCACGCTCGCTGGCACGACGTCCTCATCGAAGCACGCATTCCGAGAATGTTCGCGAGAACCGTCGACTC GATCTCGCGGCCCGCGAAGGCAACTGACCACGATGCGGCTGACACGCCATGCTCCAAGGCCGTTCGGGCATCCGATGTGG CGATCGGGGTGGCCTCGGCGGCCAGCGCGTCTGCGGATCCAAGCCTCGCCGCGGCTGCCGCGAGTTCGATTTCGATCGCG CCCGGCTCGTCAACGGCCGGCGGCGCCACGGCGGCGCCCGACGCACCGGCGGCAGCGCGCTTCGAGATAGCGGCGCACGA CGAGCCCGACTCGTTCGAGTACGAGCCGCAGCATTTCGCCGAGTTAGATGGCTTGGCCAGCGACGTCGGCGAACCGGCCG CGCACTCCGCCCAGGCACGCCCCCCGTCATCGCGCGAATCGGCAGCCGGGCCCGGCACGATTCACGAGCCGGGCCCGCTC CCCGCGCCGGAATCGGCTGCTCCTATCTCACCCATCTTTGCCGGCTTCGATCTCGCAGCGGCATCGATTTTTACCGAGAG GAGCGGGTCGGCAGAAACAGACGTCGGCGCCGACGTCGATCTGGCTCCAGTGCGGCACGAGGCTGCGGCCTGCGCGTCCC AGGGCACGGACGCCTTCGACGAACTGATCGCGATCGCCGGGATGACCGTGGACGCCGTCCACCAGGACGACCCGATGCTG TCCAGCCGCTCGATGCTGCCCCTCGTCGACGAAGAGGATCCCGATCCGCTCGCCGCGCTTGCCCGCGAGTATCAGCGCAC GCTGCTAGGCGGCGAGCCGCGCTCCGCGCACGGCCTCAAAGCCGCGGCCAGCGCAAGCGTCGAGCATGCCTTACCCGTCC CGACGGCGCGCAATATATTCGATCGCCACGCCGCGCCACCGGGCCACGACGCCTCGGTGTTCGATCTGCTGACGAAGGAC AAGAACATCGACGCGCTGCTCGACGAGCTCGACACGTTCGGCGCGAACCATCTGTTCGAGCCCGAACCTCGCCACGAAAT CCTCTCGCTGCTCGCGCCACGCGGCGTTCGCGCATCGCTCGCGGCTCAGACCGCCCAGCTAGCGCGCGCCGAACATCACC TAATCAGTCTGGACAGCCATCTGGCCATGTCCGATCCCACCGCACCTTTCGATGACGACAAACACTGA
Upstream 100 bases:
>100_bases AACGGGCGTGCCGGCCCGCCGCCGTTCGCCTCGCGGCAAGCGTCCCGTTTCCCCTGCCGTGCGGGCGGATCCGATTGGCC GCCACCGATACTCGCCAACC
Downstream 100 bases:
>100_bases CCTTCCCGGTTCGGGTGCTCCGAGCCACGCCCGCCTCGACGCCGATACGTTCGACGCACTGAAATCCCGAACCGAGGATC ACGTGCGCCGCTGCCCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MTDYHARWHDVLIEARIPRMFARTVDSISRPAKATDHDAADTPCSKAVRASDVAIGVASAASASADPSLAAAAASSISIA PGSSTAGGATAAPDAPAAARFEIAAHDEPDSFEYEPQHFAELDGLASDVGEPAAHSAQARPPSSRESAAGPGTIHEPGPL PAPESAAPISPIFAGFDLAAASIFTERSGSAETDVGADVDLAPVRHEAAACASQGTDAFDELIAIAGMTVDAVHQDDPML SSRSMLPLVDEEDPDPLAALAREYQRTLLGGEPRSAHGLKAAASASVEHALPVPTARNIFDRHAAPPGHDASVFDLLTKD KNIDALLDELDTFGANHLFEPEPRHEILSLLAPRGVRASLAAQTAQLARAEHHLISLDSHLAMSDPTAPFDDDKH
Sequences:
>Translated_395_residues MTDYHARWHDVLIEARIPRMFARTVDSISRPAKATDHDAADTPCSKAVRASDVAIGVASAASASADPSLAAAAASSISIA PGSSTAGGATAAPDAPAAARFEIAAHDEPDSFEYEPQHFAELDGLASDVGEPAAHSAQARPPSSRESAAGPGTIHEPGPL PAPESAAPISPIFAGFDLAAASIFTERSGSAETDVGADVDLAPVRHEAAACASQGTDAFDELIAIAGMTVDAVHQDDPML SSRSMLPLVDEEDPDPLAALAREYQRTLLGGEPRSAHGLKAAASASVEHALPVPTARNIFDRHAAPPGHDASVFDLLTKD KNIDALLDELDTFGANHLFEPEPRHEILSLLAPRGVRASLAAQTAQLARAEHHLISLDSHLAMSDPTAPFDDDKH >Mature_394_residues TDYHARWHDVLIEARIPRMFARTVDSISRPAKATDHDAADTPCSKAVRASDVAIGVASAASASADPSLAAAAASSISIAP GSSTAGGATAAPDAPAAARFEIAAHDEPDSFEYEPQHFAELDGLASDVGEPAAHSAQARPPSSRESAAGPGTIHEPGPLP APESAAPISPIFAGFDLAAASIFTERSGSAETDVGADVDLAPVRHEAAACASQGTDAFDELIAIAGMTVDAVHQDDPMLS SRSMLPLVDEEDPDPLAALAREYQRTLLGGEPRSAHGLKAAASASVEHALPVPTARNIFDRHAAPPGHDASVFDLLTKDK NIDALLDELDTFGANHLFEPEPRHEILSLLAPRGVRASLAAQTAQLARAEHHLISLDSHLAMSDPTAPFDDDKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41010; Mature: 40879
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDYHARWHDVLIEARIPRMFARTVDSISRPAKATDHDAADTPCSKAVRASDVAIGVASA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHEEEHHHH ASASADPSLAAAAASSISIAPGSSTAGGATAAPDAPAAARFEIAAHDEPDSFEYEPQHFA CCCCCCCHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHH ELDGLASDVGEPAAHSAQARPPSSRESAAGPGTIHEPGPLPAPESAAPISPIFAGFDLAA HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH ASIFTERSGSAETDVGADVDLAPVRHEAAACASQGTDAFDELIAIAGMTVDAVHQDDPML HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCCCCC SSRSMLPLVDEEDPDPLAALAREYQRTLLGGEPRSAHGLKAAASASVEHALPVPTARNIF CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHCCCCCHHHHHH DRHAAPPGHDASVFDLLTKDKNIDALLDELDTFGANHLFEPEPRHEILSLLAPRGVRASL HHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHH AAQTAQLARAEHHLISLDSHLAMSDPTAPFDDDKH HHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TDYHARWHDVLIEARIPRMFARTVDSISRPAKATDHDAADTPCSKAVRASDVAIGVASA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHEEEHHHH ASASADPSLAAAAASSISIAPGSSTAGGATAAPDAPAAARFEIAAHDEPDSFEYEPQHFA CCCCCCCHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHH ELDGLASDVGEPAAHSAQARPPSSRESAAGPGTIHEPGPLPAPESAAPISPIFAGFDLAA HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH ASIFTERSGSAETDVGADVDLAPVRHEAAACASQGTDAFDELIAIAGMTVDAVHQDDPML HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCCCCC SSRSMLPLVDEEDPDPLAALAREYQRTLLGGEPRSAHGLKAAASASVEHALPVPTARNIF CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHCCCCCHHHHHH DRHAAPPGHDASVFDLLTKDKNIDALLDELDTFGANHLFEPEPRHEILSLLAPRGVRASL HHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHH AAQTAQLARAEHHLISLDSHLAMSDPTAPFDDDKH HHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA