Click here to switch to the map view.

The map label for this gene is 238023647

Identifier: 238023647

GI number: 238023647

Start: 179501

End: 180571

Strand: Reverse

Name: 238023647

Synonym: bglu_2g01560

Alternate gene names: NA

Gene position: 180571-179501 (Counterclockwise)

Preceding gene: 238023648

Following gene: 238023646

Centisome position: 6.39

GC content: 69.0

Gene sequence:

>1071_bases
ATGAGCCGCGACCCCGCCGGCGTCGCGGCGCCGAATTGCGGCAACGACATCGAGCCTCCCCGAGCGCGGCTCGATCCGGG
CAAACTCAGGGCTTGGTTCGACCCCGATGCGCCGTGGCGGGCCGGCTTCCTCAGCCTGTTGCGCACGATCGCCGCTCGTG
AACCCGGGCTGCGCCCGCCCGGCACGGCGAGCCGGCCGTGCGACGAGCCGTTCCGGATCGGCCAGCAGCCAACGCTGACG
TTCGCGCCGCGCGAGATCGCCGCGCTCGGCATCCACGACGGCCGCCTCGACATCAGGCTGTTCGGTCTCGGCCTGTGGGG
GCCGCAGGGGCCGTTGCCGCTGCATATGACGGAGCTCGCGTACAGTCGCGTCGAAAGCCATCAGGATCACGCCCTGGTGC
ATCTGCTCGACGTGTTTCACCACCGCGCCTTGTCGCAGTTCTACCGCGCCTGGGCGTCGGCGCAGAGCATCGCCTCGCTC
GACCGGCCCGACGAGGAAACCTTCTCGTTCTATGTCGCGAGTCTCGCCGGCACCGATCCGGACGAGGCGCGGCGCTCTTG
CCTGGCCACCCATGCGCGCTACAGCGCGGCGGCGCATCTGGTGCGGGAGGCACGCAACCCGGACGGCATCGCCACCACGC
TGTCGCATTACTTCGGCGTGCCGATGCAGGTCGAGGAATTCGTCGCGCACTGGATCCGGCTCTCCGATACCGAGCACACG
CACATCGGCAAGCCCGGGCATGCCTCGATTATCGGCGAGGGCGCGCTGCTGGGCGAAGCGATTCCGGACCGGCAGCACAA
GTTCCGGTTGGTGGTCGGGCCGCTCGATCTCGGCCAATACCTGCGCCTGACGCCGCACGGCGCCGATCTCGCTACCTTCG
TCGAATGGGTACGCGCGTTCGTCGGCCACGAGTACGCGTGGGAGGTCAAGCTGCTGATAAAGCCGTGCGAGGTGCCGCCC
GCGCGCGCCGACACTTCGCAGCGGCTCGGCTATTCAACATGGCTCGGCGAGCCGACGCACGATCGCCCCGTGGTCGGCAT
GGTGTTCGAGCCGGAACAGTACACCGACTGA

Upstream 100 bases:

>100_bases
GGCACGTATCGATCAACGTGTTCACCGAGACCGAGCTGCATTCGATGCAACGCGGCCTCGTGACGCGCTGGCGACCGCGC
ATGGGCGGCCGAGGCGCCGT

Downstream 100 bases:

>100_bases
ACTCTGGAGCCAATACGCATGACACTCGAGACGCCCTCTCCCGCCACCCGTTACACCGATCTGCTCGAACCGGTTTCCTC
CGACGCACCGTGCGGCGCCG

Product: type VI secretion protein

Products: NA

Alternate protein names: Cytoplasmic Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein ImpH; Type VI Secretion System Protein; Type VI Secretion Protein Family; T6ss R; Type VI Secretion System Core Protein; Type VI Secretion System Protein EvpG; Conserved Protein; Secreted Protein; Cytoplasmic Protein SciB

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MSRDPAGVAAPNCGNDIEPPRARLDPGKLRAWFDPDAPWRAGFLSLLRTIAAREPGLRPPGTASRPCDEPFRIGQQPTLT
FAPREIAALGIHDGRLDIRLFGLGLWGPQGPLPLHMTELAYSRVESHQDHALVHLLDVFHHRALSQFYRAWASAQSIASL
DRPDEETFSFYVASLAGTDPDEARRSCLATHARYSAAAHLVREARNPDGIATTLSHYFGVPMQVEEFVAHWIRLSDTEHT
HIGKPGHASIIGEGALLGEAIPDRQHKFRLVVGPLDLGQYLRLTPHGADLATFVEWVRAFVGHEYAWEVKLLIKPCEVPP
ARADTSQRLGYSTWLGEPTHDRPVVGMVFEPEQYTD

Sequences:

>Translated_356_residues
MSRDPAGVAAPNCGNDIEPPRARLDPGKLRAWFDPDAPWRAGFLSLLRTIAAREPGLRPPGTASRPCDEPFRIGQQPTLT
FAPREIAALGIHDGRLDIRLFGLGLWGPQGPLPLHMTELAYSRVESHQDHALVHLLDVFHHRALSQFYRAWASAQSIASL
DRPDEETFSFYVASLAGTDPDEARRSCLATHARYSAAAHLVREARNPDGIATTLSHYFGVPMQVEEFVAHWIRLSDTEHT
HIGKPGHASIIGEGALLGEAIPDRQHKFRLVVGPLDLGQYLRLTPHGADLATFVEWVRAFVGHEYAWEVKLLIKPCEVPP
ARADTSQRLGYSTWLGEPTHDRPVVGMVFEPEQYTD
>Mature_355_residues
SRDPAGVAAPNCGNDIEPPRARLDPGKLRAWFDPDAPWRAGFLSLLRTIAAREPGLRPPGTASRPCDEPFRIGQQPTLTF
APREIAALGIHDGRLDIRLFGLGLWGPQGPLPLHMTELAYSRVESHQDHALVHLLDVFHHRALSQFYRAWASAQSIASLD
RPDEETFSFYVASLAGTDPDEARRSCLATHARYSAAAHLVREARNPDGIATTLSHYFGVPMQVEEFVAHWIRLSDTEHTH
IGKPGHASIIGEGALLGEAIPDRQHKFRLVVGPLDLGQYLRLTPHGADLATFVEWVRAFVGHEYAWEVKLLIKPCEVPPA
RADTSQRLGYSTWLGEPTHDRPVVGMVFEPEQYTD

Specific function: Unknown

COG id: COG3520

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39534; Mature: 39403

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRDPAGVAAPNCGNDIEPPRARLDPGKLRAWFDPDAPWRAGFLSLLRTIAAREPGLRPP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCC
GTASRPCDEPFRIGQQPTLTFAPREIAALGIHDGRLDIRLFGLGLWGPQGPLPLHMTELA
CCCCCCCCCHHHCCCCCCEEECCHHHEEEECCCCEEEEEEEEEEECCCCCCCCCHHHHHH
YSRVESHQDHALVHLLDVFHHRALSQFYRAWASAQSIASLDRPDEETFSFYVASLAGTDP
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCH
DEARRSCLATHARYSAAAHLVREARNPDGIATTLSHYFGVPMQVEEFVAHWIRLSDTEHT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC
HIGKPGHASIIGEGALLGEAIPDRQHKFRLVVGPLDLGQYLRLTPHGADLATFVEWVRAF
CCCCCCCCEEEECCHHHCCCCCCCCCEEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHH
VGHEYAWEVKLLIKPCEVPPARADTSQRLGYSTWLGEPTHDRPVVGMVFEPEQYTD
HCCCCEEEEEEEEECCCCCCCCCCHHHHCCCHHHCCCCCCCCCEEEEEECCHHCCC
>Mature Secondary Structure 
SRDPAGVAAPNCGNDIEPPRARLDPGKLRAWFDPDAPWRAGFLSLLRTIAAREPGLRPP
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCC
GTASRPCDEPFRIGQQPTLTFAPREIAALGIHDGRLDIRLFGLGLWGPQGPLPLHMTELA
CCCCCCCCCHHHCCCCCCEEECCHHHEEEECCCCEEEEEEEEEEECCCCCCCCCHHHHHH
YSRVESHQDHALVHLLDVFHHRALSQFYRAWASAQSIASLDRPDEETFSFYVASLAGTDP
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCH
DEARRSCLATHARYSAAAHLVREARNPDGIATTLSHYFGVPMQVEEFVAHWIRLSDTEHT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC
HIGKPGHASIIGEGALLGEAIPDRQHKFRLVVGPLDLGQYLRLTPHGADLATFVEWVRAF
CCCCCCCCEEEECCHHHCCCCCCCCCEEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHH
VGHEYAWEVKLLIKPCEVPPARADTSQRLGYSTWLGEPTHDRPVVGMVFEPEQYTD
HCCCCEEEEEEEEECCCCCCCCCCHHHHCCCHHHCCCCCCCCCEEEEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA