| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is bcr [H]
Identifier: 238023617
GI number: 238023617
Start: 134165
End: 135355
Strand: Direct
Name: bcr [H]
Synonym: bglu_2g01220
Alternate gene names: 238023617
Gene position: 134165-135355 (Clockwise)
Preceding gene: 238023616
Following gene: 238023618
Centisome position: 4.75
GC content: 66.5
Gene sequence:
>1191_bases ATGTCGAACTCAAACAGATACGAAAATTTCCTCGTGTTCCTAGCCCCGCTGATCAACAGCGTCGGCGGGATCGCGATCGA CCTCTATGCGCCCAGCATTCCGGCCATCGGTCGAGAACTCAATGTCATGCCGAGCATGATGCAGAACACCATCACGATCA CGCTCGTGTTCTATGCGATCGGCCAGCTCGCGTTCGGCATGCTGACGGACTGGTGGGGCAGACGCCCGTCGATACTGTTC GGCCTTGCGCTGTTCATCGCCGGCAGTGCGCTCGCGGTCGCCGCGCCCTCGTTTGAGGTGCTGATGGCGGCACGCGCGAT TCAGGGCTTCGCGATCGGATCATGCCAGGTCGTGGCGCGCGCCGTGCTGGTCGACCGGCTCAAGGGCGACCGCTTCCGCG TCGCGATCGTCTACCTCAGCCTCGCGTTCGGGCTGGGCCCCGTGGTCGCGCCGTATGTGGGCGGACACGTGCAGGAGTGG GCCGGCTGGCGCTGGAACTTCGTGGTGTACTGCGGCTACGGCCTGGTCGTGCTGTCGTTCGCGTTCGCGGGCCTGCGCGA GACGCTGCGGCCGGAGCTGCGGCGCACGCCGCGGCAGACCATTGCGGGCTATCGCGAGATCCTGTCCGACTCGCACTTCC AGTCGGCCGTGGCGATGCTCGGGATGAGCTTCTCGGCGTTCCTGATGTGGAACGTGATCGGGCCGTACATCGTGCAAACC CGCCTCGGGCATTCCGCGTCGTACTTCGGTGCCACCGCGCTCGGCGTCGGCGTGTGCTACCTCGGCGGCACGACGCTGAA CCGGAGCCTGATCCGGCGCTTCAACGGCGAGCAGCTGATGCGCGGCGGCATCGTGACCTTTGCGCTCGGGGTCGCCTGCG TGGCATCGAGCGGCAGCGAGCTGAGCCTGGCGACCGCGCTCGGCGGGATCATGCTGATCGCGTTTGCGCAGGGCTTCATC TTCTCCAACGCGATGGCTCGCTCGATGGCCCTGTTCCCGGGCCGCGCGGGCGCCGCCGCAAGCCTGCAGGGATGCCTGAT GCTTGCGCTCGGCTCGATCGTGTCGGGGATCGTCAGCGCGCTGCCGATGGAGACGAACGCGGCGATCGCCATCATGTTCG CGTGTCTGCTGGGCGTGACCATGATCGGCTTCCGGCAACTGCATCGCCTGCATCCACAGGTGGCGCGATGA
Upstream 100 bases:
>100_bases TATGCCGCTCAGGCAGGTTGAATACGCGGCAAACGGTCATTGATTCCGGCAGGCCGCACGCACTCGCGTCGGCCTGTCCC GTCATTTCGGGAGCGTCCTC
Downstream 100 bases:
>100_bases AGGCCGGCCTCGCGCTCGCGCTGCGGCTGGTACTGGGCGCGTTCTGGAGCTGGGCGGGCTTGACGAAGATCGTCGGGCAC TTCGATGCGGGGCCCTTCCT
Product: Bcr/CflA subfamily drug resistance transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: Sulfonamide resistance protein [H]
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MSNSNRYENFLVFLAPLINSVGGIAIDLYAPSIPAIGRELNVMPSMMQNTITITLVFYAIGQLAFGMLTDWWGRRPSILF GLALFIAGSALAVAAPSFEVLMAARAIQGFAIGSCQVVARAVLVDRLKGDRFRVAIVYLSLAFGLGPVVAPYVGGHVQEW AGWRWNFVVYCGYGLVVLSFAFAGLRETLRPELRRTPRQTIAGYREILSDSHFQSAVAMLGMSFSAFLMWNVIGPYIVQT RLGHSASYFGATALGVGVCYLGGTTLNRSLIRRFNGEQLMRGGIVTFALGVACVASSGSELSLATALGGIMLIAFAQGFI FSNAMARSMALFPGRAGAAASLQGCLMLALGSIVSGIVSALPMETNAAIAIMFACLLGVTMIGFRQLHRLHPQVAR
Sequences:
>Translated_396_residues MSNSNRYENFLVFLAPLINSVGGIAIDLYAPSIPAIGRELNVMPSMMQNTITITLVFYAIGQLAFGMLTDWWGRRPSILF GLALFIAGSALAVAAPSFEVLMAARAIQGFAIGSCQVVARAVLVDRLKGDRFRVAIVYLSLAFGLGPVVAPYVGGHVQEW AGWRWNFVVYCGYGLVVLSFAFAGLRETLRPELRRTPRQTIAGYREILSDSHFQSAVAMLGMSFSAFLMWNVIGPYIVQT RLGHSASYFGATALGVGVCYLGGTTLNRSLIRRFNGEQLMRGGIVTFALGVACVASSGSELSLATALGGIMLIAFAQGFI FSNAMARSMALFPGRAGAAASLQGCLMLALGSIVSGIVSALPMETNAAIAIMFACLLGVTMIGFRQLHRLHPQVAR >Mature_395_residues SNSNRYENFLVFLAPLINSVGGIAIDLYAPSIPAIGRELNVMPSMMQNTITITLVFYAIGQLAFGMLTDWWGRRPSILFG LALFIAGSALAVAAPSFEVLMAARAIQGFAIGSCQVVARAVLVDRLKGDRFRVAIVYLSLAFGLGPVVAPYVGGHVQEWA GWRWNFVVYCGYGLVVLSFAFAGLRETLRPELRRTPRQTIAGYREILSDSHFQSAVAMLGMSFSAFLMWNVIGPYIVQTR LGHSASYFGATALGVGVCYLGGTTLNRSLIRRFNGEQLMRGGIVTFALGVACVASSGSELSLATALGGIMLIAFAQGFIF SNAMARSMALFPGRAGAAASLQGCLMLALGSIVSGIVSALPMETNAAIAIMFACLLGVTMIGFRQLHRLHPQVAR
Specific function: Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance. Probable membrane translocase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]
Homologues:
Organism=Escherichia coli, GI1788509, Length=363, Percent_Identity=26.7217630853994, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI48994889, Length=373, Percent_Identity=27.0777479892761, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1790146, Length=325, Percent_Identity=30.1538461538462, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI87082312, Length=204, Percent_Identity=31.3725490196078, Blast_Score=83, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6319657, Length=169, Percent_Identity=27.810650887574, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004812 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004734 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42333; Mature: 42201
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSNRYENFLVFLAPLINSVGGIAIDLYAPSIPAIGRELNVMPSMMQNTITITLVFYAI CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GQLAFGMLTDWWGRRPSILFGLALFIAGSALAVAAPSFEVLMAARAIQGFAIGSCQVVAR HHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHEECCHHHHHHHHHHHHCCCCCHHHHHHH AVLVDRLKGDRFRVAIVYLSLAFGLGPVVAPYVGGHVQEWAGWRWNFVVYCGYGLVVLSF HHHHHHHCCCCEEHHHHHHHHHHCCCHHHHHHHCCCHHHHCCCCEEEEEEECHHHHHHHH AFAGLRETLRPELRRTPRQTIAGYREILSDSHFQSAVAMLGMSFSAFLMWNVIGPYIVQT HHHHHHHHHCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLGHSASYFGATALGVGVCYLGGTTLNRSLIRRFNGEQLMRGGIVTFALGVACVASSGSE HCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCCCC LSLATALGGIMLIAFAQGFIFSNAMARSMALFPGRAGAAASLQGCLMLALGSIVSGIVSA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LPMETNAAIAIMFACLLGVTMIGFRQLHRLHPQVAR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHCCC >Mature Secondary Structure SNSNRYENFLVFLAPLINSVGGIAIDLYAPSIPAIGRELNVMPSMMQNTITITLVFYAI CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GQLAFGMLTDWWGRRPSILFGLALFIAGSALAVAAPSFEVLMAARAIQGFAIGSCQVVAR HHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHEECCHHHHHHHHHHHHCCCCCHHHHHHH AVLVDRLKGDRFRVAIVYLSLAFGLGPVVAPYVGGHVQEWAGWRWNFVVYCGYGLVVLSF HHHHHHHCCCCEEHHHHHHHHHHCCCHHHHHHHCCCHHHHCCCCEEEEEEECHHHHHHHH AFAGLRETLRPELRRTPRQTIAGYREILSDSHFQSAVAMLGMSFSAFLMWNVIGPYIVQT HHHHHHHHHCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLGHSASYFGATALGVGVCYLGGTTLNRSLIRRFNGEQLMRGGIVTFALGVACVASSGSE HCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCCCC LSLATALGGIMLIAFAQGFIFSNAMARSMALFPGRAGAAASLQGCLMLALGSIVSGIVSA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LPMETNAAIAIMFACLLGVTMIGFRQLHRLHPQVAR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8486276; 9278503; 2694948 [H]