| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023588
Identifier: 238023588
GI number: 238023588
Start: 93998
End: 95194
Strand: Reverse
Name: 238023588
Synonym: bglu_2g00910
Alternate gene names: NA
Gene position: 95194-93998 (Counterclockwise)
Preceding gene: 238023590
Following gene: 238023587
Centisome position: 3.37
GC content: 71.85
Gene sequence:
>1197_bases ATGGCTACCCCCGCCGCCGTCGCCCCGGCGCAACCCAGTCCACGCTCGGCCGGTGCCGCCGTCGAGCCCCGCCCGCTGTC GACCCTGGAGGAACTCGTCGAGGTCATCGTGGCGCGCCGCGACGAATTCGAACGGCTGTCGCACGTGCCGCGCGACGTCA TCGATCTGTTCAAGCGGGCCGGCATCTACCGGGCCGCCACGCCGAAGCGCTTCGGCGGCGACGCGCGCGCGCCGGCCGAA TTTCTCGAGATGATCGAGACCATCGCGACGGCGGACGGCTCGGCCGCGTGGGTCGCGAGCTTCGGCTCGGCCAACGTCTA CCTCGCGGCGCTGCCGCTCGAGACGCAGGCCAGGCTCTATGCGGGCGGCCCCGATCAGGCCTTCGGCGCCGGGCTGTTTC CGGTGCAGAAGGTCCGGCGCGCCGACGGCGGATGGCTGATCGACGGCACCTGGAAGTTCGCGAGCGGCTGCAAGGGCGCG GACTGGCTCGGCGTGGGCATCGATACCGGCGCCAACGGCGACGGTGCGCCCAACAAGCCGCGCACCGCGGTCTTTCCGGC CAGCGAGATCGAAATCGTCGAGAACTGGAGCGTGGTGGGCATGCAGGGCACCGGCAGCCACGACCTGCGCGTCAACGGCA AGGTCGTGGCCGACGAATGGACCTTCGTGCGCGGCGGCGCGCCGACGGTGGACGAGCCGCTGTATCGCTATCCGACCGTC GCCTACGCGGCGCAGGTGCTGGCGGTGGTGAATCTCGGCCTGGCGCGCGCCGCGCTCGACGTGTCCAACCAGATGTCGGG CGGCCGGCGCACCACCACCGGCGCGCCGCAGCTGGCCGATCGCGCCTACTACCGAATCGAGCTGGCCAAGGCCGAAGCGC AACTGCGTTCGGTCCGGGCCTTCTTCTACGACGCCACGCGCACCGTCTGGGAATCGATCCAGGCCGGCGGCGCGGCCACG CCCGAGCAGGTCAGCCTGCTGCGCCTGGCCGCCACCCAGGCCGCCCGCGAGGGCGCGGACGTGGTATATCGGGCCTACCG GCTCGGCGGCACGATGGCGATCTATCGCACCCATCCGTTGCAGCGCCTGCTGCGCGACGCGCTCGTCGTCACGCAGCATG CCTTCCTCGCGGAAGGCAACTACGACGGCGCCGGCGCGGTGTTCGTCGGCGTGCCGCCGATCCCGGGCTACCTGTGA
Upstream 100 bases:
>100_bases CCTAGACTGAGCCTCAGATCAACCGGTTCGGGCGAGCCGTTCGCCACGCGCGGCGACCACCCGGCTCGCATCGCCGTCCC GCACCATCAGGAGATATGTC
Downstream 100 bases:
>100_bases CGTCTGCGCGCCTGCGCCGTGCCGGTGGCGTGCGCGCCGGCCTGTGCGCATCCTCTTCATCCGACCTCGAGCGAGATTCC ATCCCATGAGCGAATCCCCC
Product: acyl-CoA dehydrogenase type 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MATPAAVAPAQPSPRSAGAAVEPRPLSTLEELVEVIVARRDEFERLSHVPRDVIDLFKRAGIYRAATPKRFGGDARAPAE FLEMIETIATADGSAAWVASFGSANVYLAALPLETQARLYAGGPDQAFGAGLFPVQKVRRADGGWLIDGTWKFASGCKGA DWLGVGIDTGANGDGAPNKPRTAVFPASEIEIVENWSVVGMQGTGSHDLRVNGKVVADEWTFVRGGAPTVDEPLYRYPTV AYAAQVLAVVNLGLARAALDVSNQMSGGRRTTTGAPQLADRAYYRIELAKAEAQLRSVRAFFYDATRTVWESIQAGGAAT PEQVSLLRLAATQAAREGADVVYRAYRLGGTMAIYRTHPLQRLLRDALVVTQHAFLAEGNYDGAGAVFVGVPPIPGYL
Sequences:
>Translated_398_residues MATPAAVAPAQPSPRSAGAAVEPRPLSTLEELVEVIVARRDEFERLSHVPRDVIDLFKRAGIYRAATPKRFGGDARAPAE FLEMIETIATADGSAAWVASFGSANVYLAALPLETQARLYAGGPDQAFGAGLFPVQKVRRADGGWLIDGTWKFASGCKGA DWLGVGIDTGANGDGAPNKPRTAVFPASEIEIVENWSVVGMQGTGSHDLRVNGKVVADEWTFVRGGAPTVDEPLYRYPTV AYAAQVLAVVNLGLARAALDVSNQMSGGRRTTTGAPQLADRAYYRIELAKAEAQLRSVRAFFYDATRTVWESIQAGGAAT PEQVSLLRLAATQAAREGADVVYRAYRLGGTMAIYRTHPLQRLLRDALVVTQHAFLAEGNYDGAGAVFVGVPPIPGYL >Mature_397_residues ATPAAVAPAQPSPRSAGAAVEPRPLSTLEELVEVIVARRDEFERLSHVPRDVIDLFKRAGIYRAATPKRFGGDARAPAEF LEMIETIATADGSAAWVASFGSANVYLAALPLETQARLYAGGPDQAFGAGLFPVQKVRRADGGWLIDGTWKFASGCKGAD WLGVGIDTGANGDGAPNKPRTAVFPASEIEIVENWSVVGMQGTGSHDLRVNGKVVADEWTFVRGGAPTVDEPLYRYPTVA YAAQVLAVVNLGLARAALDVSNQMSGGRRTTTGAPQLADRAYYRIELAKAEAQLRSVRAFFYDATRTVWESIQAGGAATP EQVSLLRLAATQAAREGADVVYRAYRLGGTMAIYRTHPLQRLLRDALVVTQHAFLAEGNYDGAGAVFVGVPPIPGYL
Specific function: Involved in pigment production acting as an hydroxylase that transforms indole to indoxyl, resulting in the formation of indigo [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013107 - InterPro: IPR006091 - InterPro: IPR009075 - InterPro: IPR013786 - InterPro: IPR009100 [H]
Pfam domain/function: PF08028 Acyl-CoA_dh_2 [H]
EC number: NA
Molecular weight: Translated: 42401; Mature: 42270
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPAAVAPAQPSPRSAGAAVEPRPLSTLEELVEVIVARRDEFERLSHVPRDVIDLFKRA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC GIYRAATPKRFGGDARAPAEFLEMIETIATADGSAAWVASFGSANVYLAALPLETQARLY CCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCEEE AGGPDQAFGAGLFPVQKVRRADGGWLIDGTWKFASGCKGADWLGVGIDTGANGDGAPNKP ECCCCHHHCCCCCHHHHHHHCCCCEEEECCCHHCCCCCCCCEEEEECCCCCCCCCCCCCC RTAVFPASEIEIVENWSVVGMQGTGSHDLRVNGKVVADEWTFVRGGAPTVDEPLYRYPTV CEEECCCCCEEEEECCEEEEECCCCCCCEEECCEEEECCEEEEECCCCCCCCCHHHCCHH AYAAQVLAVVNLGLARAALDVSNQMSGGRRTTTGAPQLADRAYYRIELAKAEAQLRSVRA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCEEEEEEHHHHHHHHHHHH FFYDATRTVWESIQAGGAATPEQVSLLRLAATQAAREGADVVYRAYRLGGTMAIYRTHPL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCHH QRLLRDALVVTQHAFLAEGNYDGAGAVFVGVPPIPGYL HHHHHHHHHHHHHHHEECCCCCCCCEEEEECCCCCCCC >Mature Secondary Structure ATPAAVAPAQPSPRSAGAAVEPRPLSTLEELVEVIVARRDEFERLSHVPRDVIDLFKRA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC GIYRAATPKRFGGDARAPAEFLEMIETIATADGSAAWVASFGSANVYLAALPLETQARLY CCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCEEE AGGPDQAFGAGLFPVQKVRRADGGWLIDGTWKFASGCKGADWLGVGIDTGANGDGAPNKP ECCCCHHHCCCCCHHHHHHHCCCCEEEECCCHHCCCCCCCCEEEEECCCCCCCCCCCCCC RTAVFPASEIEIVENWSVVGMQGTGSHDLRVNGKVVADEWTFVRGGAPTVDEPLYRYPTV CEEECCCCCEEEEECCEEEEECCCCCCCEEECCEEEECCEEEEECCCCCCCCCHHHCCHH AYAAQVLAVVNLGLARAALDVSNQMSGGRRTTTGAPQLADRAYYRIELAKAEAQLRSVRA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCEEEEEEHHHHHHHHHHHH FFYDATRTVWESIQAGGAATPEQVSLLRLAATQAAREGADVVYRAYRLGGTMAIYRTHPL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCHH QRLLRDALVVTQHAFLAEGNYDGAGAVFVGVPPIPGYL HHHHHHHHHHHHHHHEECCCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9251216 [H]