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The map label for this gene is psd [H]

Identifier: 238023538

GI number: 238023538

Start: 44153

End: 45514

Strand: Reverse

Name: psd [H]

Synonym: bglu_2g00390

Alternate gene names: 238023538

Gene position: 45514-44153 (Counterclockwise)

Preceding gene: 238023539

Following gene: 238023536

Centisome position: 1.61

GC content: 69.53

Gene sequence:

>1362_bases
GTGACGCCGGCCGCCGGCGCCAGCCCGGCGCCGCCGCAGGTCGACGATCCCGTCGCGCGAGCGTCCCCGCGCGACAGCAA
CGGCATTCAGACAAGCCACGGAGAGATATCCATGACGGCAATCCAGGGCCCCGCGCGGGCCACGCGCCGCCGCCTAGGCG
ACTGGCTCGCGACCGAGGAACTGCGGATGACGGCCTACCGCCGCCAGCTTGCTCAGGATGCCTACGCGACGGCCGGGAAA
CGGCCGCGGGCAGCCGTGGTGGCCGAACTCGCGGCGCTGTTCGAACGCGATGCGGTGCTGCGCATGAGCCTCACGCGCGC
GATCGGCGAAGCGGGCGAGGCCGGCTATGGGCTCGGCTACGCGACCATCGAGGACCTGATGTCGATCCTCGATCACGTGA
TGCGCTACGCGCCGCCCTTCAGCGAGGAGGGCCTGATCGCCTGTCCGATCAACGCGCTGCTCGACTGGCCGATGTGCATG
CCGTCCGGCTATCCGCTGTTTCGCGATGCCACCGTCAACGCGCACCTGGGCCGCCTGCTGTCGGGCTGGTGCGATTTCCT
GTCCGGCCCGCATTCGCGCGAGCATCTGCACGAGCGCGGCCCGACCGGCTGGTTCTGCGAGGCGGCGCGCGAGCGCATGC
GGCTCGACGATTTCGTCTGCCGCCGCGACGAACCGTGCTGGGGTTTCGATTCGTGGAATCACTTCTTCACGCGGCGCTTT
CGCGACGGCGCGCGGCCGGTGGCGGAGCCGAACGACCCGCGCGTGGTGGTGAGCGCCTGCGAGGCGGCGCCGTACCAGAT
CGCCGCACGCGTGCAGCGCCTCGACGAATTCTGGATCAAGTCGCAGCCTTATTCGATTCGCGACATGCTCACCCCGCAGC
ACGTGCTGCTCGCCGAACGCTTCGTGGGCGGCGACATCTATCAGGCCTACCTGAGCGCCTACAACTACCATCGCTGGCAC
GCGCCGGTGGGCGGCACCGTCACCCACGCCTACCGCATCCCCGGCACCTACTTCTCGGGCGCCGACGTCGAGGGCACCGA
CCCTTCCGGGCTCAACGATTCGCAGGGCTACATGACGGCCGTGGCCACGCGCGCGGTGGTGGTGATCGATTGCGAGGACC
CCGGCATGGGCACCGTGGCCTGCGTGTTCGTGGGAATGGGCGACGTGTCGTCGTGCGTGATCGATGCCCACCCCGGCCAG
CGCCTGGCCAAGGGCGACGAGATCGGCTATTTCCAGTACGGCGGCTCGACGTTCTGCCTGCTGTTCGAGCCGGACGTGAT
CGAACGTTTCGTGGTGGCCGGCGCACCCGAGCGCGATTCGCCCGTGGTGCCCGTCAACGCGGCGATCGCCGTGTCGCGCT
GA

Upstream 100 bases:

>100_bases
ACGGCAGGCTCGAGCGGCATGCGCAGGGCCAGCCGATTCCGGGCAGCGGGCCGCGCGAGGCCGAACCGGACCCGAACGCG
ATCGGCTCGCTGCCGCGCCA

Downstream 100 bases:

>100_bases
AAGCCGGCACCGAAGCCGGCGCGACGGCGCGGCCGGCACCGGCCGCGTGCGCCGCGCGGCCCGCTCATTTCTCGTCGCGC
GGCTTGTCGCCCGCGGCCTT

Product: phosphatidylserine decarboxylase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MTPAAGASPAPPQVDDPVARASPRDSNGIQTSHGEISMTAIQGPARATRRRLGDWLATEELRMTAYRRQLAQDAYATAGK
RPRAAVVAELAALFERDAVLRMSLTRAIGEAGEAGYGLGYATIEDLMSILDHVMRYAPPFSEEGLIACPINALLDWPMCM
PSGYPLFRDATVNAHLGRLLSGWCDFLSGPHSREHLHERGPTGWFCEAARERMRLDDFVCRRDEPCWGFDSWNHFFTRRF
RDGARPVAEPNDPRVVVSACEAAPYQIAARVQRLDEFWIKSQPYSIRDMLTPQHVLLAERFVGGDIYQAYLSAYNYHRWH
APVGGTVTHAYRIPGTYFSGADVEGTDPSGLNDSQGYMTAVATRAVVVIDCEDPGMGTVACVFVGMGDVSSCVIDAHPGQ
RLAKGDEIGYFQYGGSTFCLLFEPDVIERFVVAGAPERDSPVVPVNAAIAVSR

Sequences:

>Translated_453_residues
MTPAAGASPAPPQVDDPVARASPRDSNGIQTSHGEISMTAIQGPARATRRRLGDWLATEELRMTAYRRQLAQDAYATAGK
RPRAAVVAELAALFERDAVLRMSLTRAIGEAGEAGYGLGYATIEDLMSILDHVMRYAPPFSEEGLIACPINALLDWPMCM
PSGYPLFRDATVNAHLGRLLSGWCDFLSGPHSREHLHERGPTGWFCEAARERMRLDDFVCRRDEPCWGFDSWNHFFTRRF
RDGARPVAEPNDPRVVVSACEAAPYQIAARVQRLDEFWIKSQPYSIRDMLTPQHVLLAERFVGGDIYQAYLSAYNYHRWH
APVGGTVTHAYRIPGTYFSGADVEGTDPSGLNDSQGYMTAVATRAVVVIDCEDPGMGTVACVFVGMGDVSSCVIDAHPGQ
RLAKGDEIGYFQYGGSTFCLLFEPDVIERFVVAGAPERDSPVVPVNAAIAVSR
>Mature_452_residues
TPAAGASPAPPQVDDPVARASPRDSNGIQTSHGEISMTAIQGPARATRRRLGDWLATEELRMTAYRRQLAQDAYATAGKR
PRAAVVAELAALFERDAVLRMSLTRAIGEAGEAGYGLGYATIEDLMSILDHVMRYAPPFSEEGLIACPINALLDWPMCMP
SGYPLFRDATVNAHLGRLLSGWCDFLSGPHSREHLHERGPTGWFCEAARERMRLDDFVCRRDEPCWGFDSWNHFFTRRFR
DGARPVAEPNDPRVVVSACEAAPYQIAARVQRLDEFWIKSQPYSIRDMLTPQHVLLAERFVGGDIYQAYLSAYNYHRWHA
PVGGTVTHAYRIPGTYFSGADVEGTDPSGLNDSQGYMTAVATRAVVVIDCEDPGMGTVACVFVGMGDVSSCVIDAHPGQR
LAKGDEIGYFQYGGSTFCLLFEPDVIERFVVAGAPERDSPVVPVNAAIAVSR

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 2 subfamily [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6321609, Length=239, Percent_Identity=23.4309623430962, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003817
- InterPro:   IPR005221 [H]

Pfam domain/function: PF02666 PS_Dcarbxylase [H]

EC number: =4.1.1.65 [H]

Molecular weight: Translated: 49724; Mature: 49592

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPAAGASPAPPQVDDPVARASPRDSNGIQTSHGEISMTAIQGPARATRRRLGDWLATEE
CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH
LRMTAYRRQLAQDAYATAGKRPRAAVVAELAALFERDAVLRMSLTRAIGEAGEAGYGLGY
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
ATIEDLMSILDHVMRYAPPFSEEGLIACPINALLDWPMCMPSGYPLFRDATVNAHLGRLL
HHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHCCCCCCCCCCCCEECCCCHHHHHHHH
SGWCDFLSGPHSREHLHERGPTGWFCEAARERMRLDDFVCRRDEPCWGFDSWNHFFTRRF
HHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
RDGARPVAEPNDPRVVVSACEAAPYQIAARVQRLDEFWIKSQPYSIRDMLTPQHVLLAER
HCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHH
FVGGDIYQAYLSAYNYHRWHAPVGGTVTHAYRIPGTYFSGADVEGTDPSGLNDSQGYMTA
HHCHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCEECCCCCCCCCCCCCCCCCCHHHE
VATRAVVVIDCEDPGMGTVACVFVGMGDVSSCVIDAHPGQRLAKGDEIGYFQYGGSTFCL
EECCEEEEEECCCCCCCEEEEEEEECCCCCCEEEECCCCCHHCCCCCCCEEEECCCEEEE
LFEPDVIERFVVAGAPERDSPVVPVNAAIAVSR
EECHHHHHHHHHCCCCCCCCCEEECCCEEEECC
>Mature Secondary Structure 
TPAAGASPAPPQVDDPVARASPRDSNGIQTSHGEISMTAIQGPARATRRRLGDWLATEE
CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH
LRMTAYRRQLAQDAYATAGKRPRAAVVAELAALFERDAVLRMSLTRAIGEAGEAGYGLGY
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
ATIEDLMSILDHVMRYAPPFSEEGLIACPINALLDWPMCMPSGYPLFRDATVNAHLGRLL
HHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHCCCCCCCCCCCCEECCCCHHHHHHHH
SGWCDFLSGPHSREHLHERGPTGWFCEAARERMRLDDFVCRRDEPCWGFDSWNHFFTRRF
HHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
RDGARPVAEPNDPRVVVSACEAAPYQIAARVQRLDEFWIKSQPYSIRDMLTPQHVLLAER
HCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHH
FVGGDIYQAYLSAYNYHRWHAPVGGTVTHAYRIPGTYFSGADVEGTDPSGLNDSQGYMTA
HHCHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCEECCCCCCCCCCCCCCCCCCHHHE
VATRAVVVIDCEDPGMGTVACVFVGMGDVSSCVIDAHPGQRLAKGDEIGYFQYGGSTFCL
EECCEEEEEECCCCCCCEEEEEEEECCCCCCEEEECCCCCHHCCCCCCCEEEECCCEEEE
LFEPDVIERFVVAGAPERDSPVVPVNAAIAVSR
EECHHHHHHHHHCCCCCCCCCEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA