| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023521
Identifier: 238023521
GI number: 238023521
Start: 21760
End: 22971
Strand: Reverse
Name: 238023521
Synonym: bglu_2g00210
Alternate gene names: NA
Gene position: 22971-21760 (Counterclockwise)
Preceding gene: 238023522
Following gene: 238023520
Centisome position: 0.81
GC content: 69.8
Gene sequence:
>1212_bases ATGAAGCCGGGCGCCCGCACCGAGGGGCCGGCCGGCGAGCCCGACCCGCAGCCGCAGGCCGGCGCGCCGCTGGCGCACAC GCTGCCCTACGAGACGGTCGCGCTCGTGCTGCAGGGCGGCGGCGCGCTCGGCGCCTATCAGGCCGGCGTGTTCGAAGGGC TGCACGAGGCCGGCATCCCGCTGAACTGGATCGCCGGCATCTCGATCGGCGCGCTCAACACCGCGCTGATCGCCGGCAAT CCGCCCGAGCGGCAGCTCGAGCGGCTGCGCGAGTTCTGGAACCGGATCTGCCAGCCGGCGTTCTTCCCGGCCTTGCCGGC CGCGCTCGAGTTCGCGCTGTTCAACAGCGTCGATTCGGTGCGCCAGGCGTTCACGGCCTCGCAGGCGGCCAGCGCGATCC TGCAGGGGCAGCGCGGCTTCTTCGTGCCGCGCTTCCCGCCGCCGCTGCCCGGCGTGCGCGACGATCCCAGGCGCGTCAGC TACTACGACACCTCGGCGCTGCGCGCCACGCTGCTCGAGCTCTGCGATTTCGACCGCATCAACTCGGACGAGATCCGCGT GTCGGTGGGCGCGGTCAACGTCGCCACCGGCAACTTCATCTACTTCGACAACACCCGCATGACGCTGCGCCCCGAGCACT TCATGGCCTCGGGCGCGCTGCCGCCGGCGTTCCCGCCGGTGGAGATCGACGGCGAGTTCTACTGGGACGGCGGGGTGGTG TCGAACACGCCGTTGATGGAAGTGCTGCGCGCCTCGCCGCGACGCGACACGCTGGCGTTCCAGGTGGACCTCTGGAACGC GCGCGGGCCGCTGCCGGGCACGCTCGCCGACGTCACCGAGCGTATGAAGGACGTGCAGTATTCGAGCCGCACGCGTTTCG TCACCGACACGCTGCAGCGCGAACAGCGCTTTCGCAACGTGCTGCGCCGCGTGCTCGAACTGGTGCCGGAGGAGCTGCGC AACAGCGATCCGTGGGCACAGCAGGCGGCCGTGCTGTCGACCGGCAAGCGCTACAACGTGCAGCATCTGATCTACCATCA GAAGACGTACGAGCACGACTACAAGGACTACCAGTTCGGGTTGTCGACGATGCGCGACCACTGGTCCGCGGGGCTCACCG ACATTCGCAGGACGCTGGCCGTGCCGGATGCGCTGGCGTTGCCCGAGAACGACGCCGGGTTCGTCACGCACGACATCTAC CGTCCCCGCTGA
Upstream 100 bases:
>100_bases CGGTGGAGGACGTGGCGCAGACGGTGCTGTTCCTGTCGGCGTTCCCGAGCGCGGCGTTCACGGGCCAGTCGTTCGTCGTC AGCCACGGCTGGTTCATGCA
Downstream 100 bases:
>100_bases GGCTCGCGCTCACGCGGCCGGCGCGGCCCGCGCCGGCCGCGTTGTCGTTTTCTTCCGCGCTTTCGTCATGCCGATCCTGC TCGCTCTTTTCATGTTGGCC
Product: patatin family phospholipase
Products: NA
Alternate protein names: Patatin-Like Phospholipase; Esterase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Transmembrane Protein; Transmembrane Patatin-Like Phospholipase; Patatin-Like Phospholipase Domain-Containing Protein; FabD/Lysophospholipase-Like Esterase; Alpha/Beta Hydrolase; Patatin-Like Phospholipase Family; FabD/Lysophospholipase; Serine Protease; Alpha-Beta Hydrolase Family Esterase; Patatin Family Phospholipase; Dehydrogenase/Reductase; Phospholipase Patatin Family; Phospholipase Patatin Family Protein; Phospholipase; Transpatatin- Like Phospholipase Domain-Containing Protein
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MKPGARTEGPAGEPDPQPQAGAPLAHTLPYETVALVLQGGGALGAYQAGVFEGLHEAGIPLNWIAGISIGALNTALIAGN PPERQLERLREFWNRICQPAFFPALPAALEFALFNSVDSVRQAFTASQAASAILQGQRGFFVPRFPPPLPGVRDDPRRVS YYDTSALRATLLELCDFDRINSDEIRVSVGAVNVATGNFIYFDNTRMTLRPEHFMASGALPPAFPPVEIDGEFYWDGGVV SNTPLMEVLRASPRRDTLAFQVDLWNARGPLPGTLADVTERMKDVQYSSRTRFVTDTLQREQRFRNVLRRVLELVPEELR NSDPWAQQAAVLSTGKRYNVQHLIYHQKTYEHDYKDYQFGLSTMRDHWSAGLTDIRRTLAVPDALALPENDAGFVTHDIY RPR
Sequences:
>Translated_403_residues MKPGARTEGPAGEPDPQPQAGAPLAHTLPYETVALVLQGGGALGAYQAGVFEGLHEAGIPLNWIAGISIGALNTALIAGN PPERQLERLREFWNRICQPAFFPALPAALEFALFNSVDSVRQAFTASQAASAILQGQRGFFVPRFPPPLPGVRDDPRRVS YYDTSALRATLLELCDFDRINSDEIRVSVGAVNVATGNFIYFDNTRMTLRPEHFMASGALPPAFPPVEIDGEFYWDGGVV SNTPLMEVLRASPRRDTLAFQVDLWNARGPLPGTLADVTERMKDVQYSSRTRFVTDTLQREQRFRNVLRRVLELVPEELR NSDPWAQQAAVLSTGKRYNVQHLIYHQKTYEHDYKDYQFGLSTMRDHWSAGLTDIRRTLAVPDALALPENDAGFVTHDIY RPR >Mature_403_residues MKPGARTEGPAGEPDPQPQAGAPLAHTLPYETVALVLQGGGALGAYQAGVFEGLHEAGIPLNWIAGISIGALNTALIAGN PPERQLERLREFWNRICQPAFFPALPAALEFALFNSVDSVRQAFTASQAASAILQGQRGFFVPRFPPPLPGVRDDPRRVS YYDTSALRATLLELCDFDRINSDEIRVSVGAVNVATGNFIYFDNTRMTLRPEHFMASGALPPAFPPVEIDGEFYWDGGVV SNTPLMEVLRASPRRDTLAFQVDLWNARGPLPGTLADVTERMKDVQYSSRTRFVTDTLQREQRFRNVLRRVLELVPEELR NSDPWAQQAAVLSTGKRYNVQHLIYHQKTYEHDYKDYQFGLSTMRDHWSAGLTDIRRTLAVPDALALPENDAGFVTHDIY RPR
Specific function: Unknown
COG id: COG1752
COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44890; Mature: 44890
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPGARTEGPAGEPDPQPQAGAPLAHTLPYETVALVLQGGGALGAYQAGVFEGLHEAGIP CCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHEEEEECCCCCHHHHHHHHHHHHHCCCC LNWIAGISIGALNTALIAGNPPERQLERLREFWNRICQPAFFPALPAALEFALFNSVDSV EEHHHCCEECCHHEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH RQAFTASQAASAILQGQRGFFVPRFPPPLPGVRDDPRRVSYYDTSALRATLLELCDFDRI HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCC NSDEIRVSVGAVNVATGNFIYFDNTRMTLRPEHFMASGALPPAFPPVEIDGEFYWDGGVV CCCCEEEEEEEEEEEECCEEEECCCEEEECCHHHHHCCCCCCCCCCEEECCEEEECCCCC SNTPLMEVLRASPRRDTLAFQVDLWNARGPLPGTLADVTERMKDVQYSSRTRFVTDTLQR CCCHHHHHHHCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH EQRFRNVLRRVLELVPEELRNSDPWAQQAAVLSTGKRYNVQHLIYHQKTYEHDYKDYQFG HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHH LSTMRDHWSAGLTDIRRTLAVPDALALPENDAGFVTHDIYRPR HHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCEECCCCCCC >Mature Secondary Structure MKPGARTEGPAGEPDPQPQAGAPLAHTLPYETVALVLQGGGALGAYQAGVFEGLHEAGIP CCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHEEEEECCCCCHHHHHHHHHHHHHCCCC LNWIAGISIGALNTALIAGNPPERQLERLREFWNRICQPAFFPALPAALEFALFNSVDSV EEHHHCCEECCHHEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH RQAFTASQAASAILQGQRGFFVPRFPPPLPGVRDDPRRVSYYDTSALRATLLELCDFDRI HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCC NSDEIRVSVGAVNVATGNFIYFDNTRMTLRPEHFMASGALPPAFPPVEIDGEFYWDGGVV CCCCEEEEEEEEEEEECCEEEECCCEEEECCHHHHHCCCCCCCCCCEEECCEEEECCCCC SNTPLMEVLRASPRRDTLAFQVDLWNARGPLPGTLADVTERMKDVQYSSRTRFVTDTLQR CCCHHHHHHHCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH EQRFRNVLRRVLELVPEELRNSDPWAQQAAVLSTGKRYNVQHLIYHQKTYEHDYKDYQFG HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHH LSTMRDHWSAGLTDIRRTLAVPDALALPENDAGFVTHDIYRPR HHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA