| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814468
Identifier: 237814468
GI number: 237814468
Start: 4086827
End: 4087282
Strand: Reverse
Name: 237814468
Synonym: GBP346_A4266
Alternate gene names: NA
Gene position: 4087282-4086827 (Counterclockwise)
Preceding gene: 237814472
Following gene: 237814466
Centisome position: 99.72
GC content: 68.64
Gene sequence:
>456_bases TTGATCCTCCGTTGCACCACCGCGCTGATCGGCTCAGGCGCATTCGTCTGCGCGTGCGCGCAAACCTATGACGGAACGAC CGCGCCGATCGACACGTCCGACTGCCGGGCGATCACCGGGCAAGCGGACATCGACGGCACGATGCAGCAGGTTGTCGGCC GCGCGTGCCTGCAAAGCGACGGCACGTGGCGGCTCGTTCAGAACCCGGACGGCAGCGTGCCGTGGTATCCGCTCGCCGCG TACCCGTACCCCGATCCGTGGTATTGGGGCGCGCCGTTCTTCGTCGGCGCGGGCACGACCTTCGTCTTCGTCGACCGCTT CCACCACTTCCATCGGTTCCATCGCTTTCATCCGATGACACCGGGCCATGTCGGCCCGCCGGCGGGCGGGGGCGTTCATC ACGGGCCATCGCGCAGCGGCGGCATGGGCGGATGGGGCGGAACGGCGCGACACTAG
Upstream 100 bases:
>100_bases GCGCGCCCGCGCCAATCGATCACGCCGGGCGGCGCGACGTAGGCGGGCCACCGCGCATCCACATGTCAGGGTGTCCGCTC AGAGCCTCATCATGAACAGG
Downstream 100 bases:
>100_bases CCCGCGCCCCCTCATCCATCCGCGAACGCACCGGCCGCCGCCGAGACGTCCGGTGCACCACGCATGGCGCCCGGTACGCG CTCGACGTGTTGATTCGATG
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MILRCTTALIGSGAFVCACAQTYDGTTAPIDTSDCRAITGQADIDGTMQQVVGRACLQSDGTWRLVQNPDGSVPWYPLAA YPYPDPWYWGAPFFVGAGTTFVFVDRFHHFHRFHRFHPMTPGHVGPPAGGGVHHGPSRSGGMGGWGGTARH
Sequences:
>Translated_151_residues MILRCTTALIGSGAFVCACAQTYDGTTAPIDTSDCRAITGQADIDGTMQQVVGRACLQSDGTWRLVQNPDGSVPWYPLAA YPYPDPWYWGAPFFVGAGTTFVFVDRFHHFHRFHRFHPMTPGHVGPPAGGGVHHGPSRSGGMGGWGGTARH >Mature_151_residues MILRCTTALIGSGAFVCACAQTYDGTTAPIDTSDCRAITGQADIDGTMQQVVGRACLQSDGTWRLVQNPDGSVPWYPLAA YPYPDPWYWGAPFFVGAGTTFVFVDRFHHFHRFHRFHPMTPGHVGPPAGGGVHHGPSRSGGMGGWGGTARH
Specific function: Unknown
COG id: COG4520
COG function: function code M; Surface antigen
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16218; Mature: 16218
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILRCTTALIGSGAFVCACAQTYDGTTAPIDTSDCRAITGQADIDGTMQQVVGRACLQSD CEEEECCHHHCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCC GTWRLVQNPDGSVPWYPLAAYPYPDPWYWGAPFFVGAGTTFVFVDRFHHFHRFHRFHPMT CCEEEEECCCCCCCCEEEECCCCCCCCCCCCCEEEECCCEEEHHHHHHHHHHHHHCCCCC PGHVGPPAGGGVHHGPSRSGGMGGWGGTARH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MILRCTTALIGSGAFVCACAQTYDGTTAPIDTSDCRAITGQADIDGTMQQVVGRACLQSD CEEEECCHHHCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCC GTWRLVQNPDGSVPWYPLAAYPYPDPWYWGAPFFVGAGTTFVFVDRFHHFHRFHRFHPMT CCEEEEECCCCCCCCEEEECCCCCCCCCCCCCEEEECCCEEEHHHHHHHHHHHHHCCCCC PGHVGPPAGGGVHHGPSRSGGMGGWGGTARH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA