Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237814389

Identifier: 237814389

GI number: 237814389

Start: 4010694

End: 4011506

Strand: Reverse

Name: 237814389

Synonym: GBP346_A4187

Alternate gene names: NA

Gene position: 4011506-4010694 (Counterclockwise)

Preceding gene: 237814391

Following gene: 237814388

Centisome position: 97.88

GC content: 66.3

Gene sequence:

>813_bases
GTGGTTGGCGCCGACGGGGGCGCTGAAATCGCGTGCAGGTTCGCAGCGTGTGCCTCGCGGCGAACATGTCGGACGCGCTC
GTCCGGGTGCGCCCTTTTGAGACAGAGATCGAGACCTGATCTCCCCACAAACGGCCGCCTTCGAAAGACGGCCGGCAACA
GCGAAAAGACTATGAGCGATGGTGTTTACGGGAACCAGGCTGCGGGGCGAGTGACCCACAGCCTGTTGCGGTTGAGCACG
GCTATGCGGAGCCAGGCATGGGATTGGGCGGAAGGCGCGGGGTTGACGCCGACGCAGGGTGAAATCCTCGTGCTGCTGCT
CCAGCGTAAAGGGCCGATGCGTCTGGGCGAGATTGCGCGCGAAACGCAGTTGACCGCCGCAACGACGAGTGATGCGGTGA
GCACGCTCGAGCACAAGGGGCTGGTCGAAAAGCGGCGCGCGCTCGACGACGGCCGCGCACTCGCGGTGCGCCTGAGCGCG
CGCGGCCGCACGGCGGCGAAGAAGGCGCTGCAGTGGCCCGACTTCCTGTCGAAGGCGGTCGGCACGCTCGGCGGCGACGA
GCAGGGCGTGCTGTACCGCGCGCTGCTGAAGACGCTGCGTGAGCTGCAGGTCAACGGCGACATTCCGCCGCACCGGATGT
GCGTGACGTGCAAACATTTCCAGCCGGGCAAGGCGGCGCGCAAGCCGACGTACCGCTGTTCGCTGCTCGATCTGACGATG
ACGGACAGCGATCTGCGTCTCGATTGCGCGGTGCATGAGGAAGCGGACGTCCTGACGCAGAAGAAGACCTGGAAGCTCTT
CGCGCAGGCGTGA

Upstream 100 bases:

>100_bases
ACACAGTTCGTTCCTGTGGTTATTTGGGTGTTATCCACAGATTTGGTGGGATAACTTAGCTGTGCGATTTTCCGCTCTCG
CTTAGAATGTCGGCTTCGCG

Downstream 100 bases:

>100_bases
TGCGCGTCGAGCGAACGCTCGTTCGCGCCGGAGGCGCCGATGAACGCTGAAGTCGTTGCGATTCGCCACGTGCATTTCGA
GGATCTCGGCAGTTTCGAGC

Product: transcriptional regulator, MarR family

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MVGADGGAEIACRFAACASRRTCRTRSSGCALLRQRSRPDLPTNGRLRKTAGNSEKTMSDGVYGNQAAGRVTHSLLRLST
AMRSQAWDWAEGAGLTPTQGEILVLLLQRKGPMRLGEIARETQLTAATTSDAVSTLEHKGLVEKRRALDDGRALAVRLSA
RGRTAAKKALQWPDFLSKAVGTLGGDEQGVLYRALLKTLRELQVNGDIPPHRMCVTCKHFQPGKAARKPTYRCSLLDLTM
TDSDLRLDCAVHEEADVLTQKKTWKLFAQA

Sequences:

>Translated_270_residues
MVGADGGAEIACRFAACASRRTCRTRSSGCALLRQRSRPDLPTNGRLRKTAGNSEKTMSDGVYGNQAAGRVTHSLLRLST
AMRSQAWDWAEGAGLTPTQGEILVLLLQRKGPMRLGEIARETQLTAATTSDAVSTLEHKGLVEKRRALDDGRALAVRLSA
RGRTAAKKALQWPDFLSKAVGTLGGDEQGVLYRALLKTLRELQVNGDIPPHRMCVTCKHFQPGKAARKPTYRCSLLDLTM
TDSDLRLDCAVHEEADVLTQKKTWKLFAQA
>Mature_270_residues
MVGADGGAEIACRFAACASRRTCRTRSSGCALLRQRSRPDLPTNGRLRKTAGNSEKTMSDGVYGNQAAGRVTHSLLRLST
AMRSQAWDWAEGAGLTPTQGEILVLLLQRKGPMRLGEIARETQLTAATTSDAVSTLEHKGLVEKRRALDDGRALAVRLSA
RGRTAAKKALQWPDFLSKAVGTLGGDEQGVLYRALLKTLRELQVNGDIPPHRMCVTCKHFQPGKAARKPTYRCSLLDLTM
TDSDLRLDCAVHEEADVLTQKKTWKLFAQA

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29457; Mature: 29457

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGADGGAEIACRFAACASRRTCRTRSSGCALLRQRSRPDLPTNGRLRKTAGNSEKTMSD
CCCCCCCHHHHHHHHHHHCCHHHHCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHC
GVYGNQAAGRVTHSLLRLSTAMRSQAWDWAEGAGLTPTQGEILVLLLQRKGPMRLGEIAR
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHH
ETQLTAATTSDAVSTLEHKGLVEKRRALDDGRALAVRLSARGRTAAKKALQWPDFLSKAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHCCCHHHHHHHH
GTLGGDEQGVLYRALLKTLRELQVNGDIPPHRMCVTCKHFQPGKAARKPTYRCSLLDLTM
HCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEE
TDSDLRLDCAVHEEADVLTQKKTWKLFAQA
CCCCEEEEEEECCHHHHHHHHHHHEEEECC
>Mature Secondary Structure
MVGADGGAEIACRFAACASRRTCRTRSSGCALLRQRSRPDLPTNGRLRKTAGNSEKTMSD
CCCCCCCHHHHHHHHHHHCCHHHHCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHC
GVYGNQAAGRVTHSLLRLSTAMRSQAWDWAEGAGLTPTQGEILVLLLQRKGPMRLGEIAR
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHH
ETQLTAATTSDAVSTLEHKGLVEKRRALDDGRALAVRLSARGRTAAKKALQWPDFLSKAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHCCCHHHHHHHH
GTLGGDEQGVLYRALLKTLRELQVNGDIPPHRMCVTCKHFQPGKAARKPTYRCSLLDLTM
HCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEE
TDSDLRLDCAVHEEADVLTQKKTWKLFAQA
CCCCEEEEEEECCHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA