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The map label for this gene is bkdR [H]

Identifier: 237814380

GI number: 237814380

Start: 4002695

End: 4003186

Strand: Reverse

Name: bkdR [H]

Synonym: GBP346_A4178

Alternate gene names: 237814380

Gene position: 4003186-4002695 (Counterclockwise)

Preceding gene: 237814383

Following gene: 237814376

Centisome position: 97.67

GC content: 65.85

Gene sequence:

>492_bases
ATGCTGGAACTCGATCACTTCGATTTGGCGCTGCTCGACGTGCTACAGCGCTTCGGTCGCGCGACGCATCAGCAACTGGG
CGAAGAGGTGCCGCTGTCGCCGTCGCAGATCGGCCGGCGGCTGCAGCGGCTCGAGGCGGCGGGCGTGATCGACGGCTACC
GCGTCGTGCTGCGGCCCGAGCGGCTCGGGCTCGGCGTCACCGCGTTCACGAGCCTGAAGCTCAAGCATCATGGCGATTCG
ATCATCGAGCAGTTCCAGCAGCAGATCGACGTGCTGCCGGAAGTGCTCGAATGCCACGCGGTGGTTGGCGATGCCGATTA
TCTGCTCAGGATCGTCGCGCCGGATCTGAACGCGCTGTCGTCGTTCGTGATGAAGAAGCTGATGCGGGTGCCGGGCGTCG
ACAGCGTGCGCTCGAACATCGTGCTCACGACGTTCAAGCGCAACGGGCCGCTGCCGCTTGGCCATCTGGCCTCCGGTGCA
CCCGCCGCCTGA

Upstream 100 bases:

>100_bases
GTAGAGCGGGGCTCGCGCGGTTTGGGCGCAAAATGGGCGATTGTGTATGGATAAATGCGATAATTGCGCATCAAAACGCA
TAATCACGCGGAGAATCATC

Downstream 100 bases:

>100_bases
TGCGCGCGGCGGGCGCCCGCCCAAGGCGAGTGGGGCGGCAGCCCGCGCACGGGGGCCGTGCGTCGGCGGGCGGCGCGCGG
CGGGTGCTCGCCGACAAGCG

Product: transcriptional regulator, AsnC family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MLELDHFDLALLDVLQRFGRATHQQLGEEVPLSPSQIGRRLQRLEAAGVIDGYRVVLRPERLGLGVTAFTSLKLKHHGDS
IIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPDLNALSSFVMKKLMRVPGVDSVRSNIVLTTFKRNGPLPLGHLASGA
PAA

Sequences:

>Translated_163_residues
MLELDHFDLALLDVLQRFGRATHQQLGEEVPLSPSQIGRRLQRLEAAGVIDGYRVVLRPERLGLGVTAFTSLKLKHHGDS
IIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPDLNALSSFVMKKLMRVPGVDSVRSNIVLTTFKRNGPLPLGHLASGA
PAA
>Mature_163_residues
MLELDHFDLALLDVLQRFGRATHQQLGEEVPLSPSQIGRRLQRLEAAGVIDGYRVVLRPERLGLGVTAFTSLKLKHHGDS
IIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPDLNALSSFVMKKLMRVPGVDSVRSNIVLTTFKRNGPLPLGHLASGA
PAA

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=149, Percent_Identity=35.5704697986577, Blast_Score=104, Evalue=3e-24,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=34, Blast_Score=94, Evalue=4e-21,
Organism=Escherichia coli, GI1790182, Length=139, Percent_Identity=25.1798561151079, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17891; Mature: 17891

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELDHFDLALLDVLQRFGRATHQQLGEEVPLSPSQIGRRLQRLEAAGVIDGYRVVLRPE
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEHH
RLGLGVTAFTSLKLKHHGDSIIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPDLNALS
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHH
SFVMKKLMRVPGVDSVRSNIVLTTFKRNGPLPLGHLASGAPAA
HHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLELDHFDLALLDVLQRFGRATHQQLGEEVPLSPSQIGRRLQRLEAAGVIDGYRVVLRPE
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEHH
RLGLGVTAFTSLKLKHHGDSIIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPDLNALS
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHH
SFVMKKLMRVPGVDSVRSNIVLTTFKRNGPLPLGHLASGAPAA
HHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]