| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814335
Identifier: 237814335
GI number: 237814335
Start: 3962813
End: 3962989
Strand: Direct
Name: 237814335
Synonym: GBP346_A4133
Alternate gene names: NA
Gene position: 3962813-3962989 (Clockwise)
Preceding gene: 237814332
Following gene: 237814336
Centisome position: 96.69
GC content: 46.89
Gene sequence:
>177_bases GTGCCGGCCCGATGCCGGCCAAGGACTTTAAAAGATCGCAAAATCGTAAGGCAGGCAATAAAAAGGTGCAACCAGATTTC ACACCCGGTTGCACCCCATATATCTCCTTTACTATCAATTATTTACCAAAAAAGACAGCCGGCCCGCACTACTTTGAACG ATCGGTATTTTCCCTGA
Upstream 100 bases:
>100_bases GAGGAGTGCGCTCGAGCCGCGACGCCGCGTCCTTCAGACGCGCGCGCAGCAGATCGTCGACTTTGACGCCCAGTGTGGTG CTTGCCATGATTTTCTTCTA
Downstream 100 bases:
>100_bases TCCTGTCAGTTCTACCGGCTCGATTTCCATGGCAATCTGGCGTGATATCGGATTCGCGTGCGCCCGCTGCCCGCGGACGC GAAGGAGAACGTAGATGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 58; Mature: 57
Protein sequence:
>58_residues MPARCRPRTLKDRKIVRQAIKRCNQISHPVAPHISPLLSIIYQKRQPARTTLNDRYFP
Sequences:
>Translated_58_residues MPARCRPRTLKDRKIVRQAIKRCNQISHPVAPHISPLLSIIYQKRQPARTTLNDRYFP >Mature_57_residues PARCRPRTLKDRKIVRQAIKRCNQISHPVAPHISPLLSIIYQKRQPARTTLNDRYFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6851; Mature: 6720
Theoretical pI: Translated: 12.02; Mature: 12.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPARCRPRTLKDRKIVRQAIKRCNQISHPVAPHISPLLSIIYQKRQPARTTLNDRYFP CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PARCRPRTLKDRKIVRQAIKRCNQISHPVAPHISPLLSIIYQKRQPARTTLNDRYFP CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA