| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814308
Identifier: 237814308
GI number: 237814308
Start: 3932439
End: 3933506
Strand: Direct
Name: 237814308
Synonym: GBP346_A4106
Alternate gene names: NA
Gene position: 3932439-3933506 (Clockwise)
Preceding gene: 237814307
Following gene: 237814310
Centisome position: 95.95
GC content: 71.63
Gene sequence:
>1068_bases ATGACGCCGACCCTCGACGAAACCGCGCTGCCGCCCGCCGACGCGCTCGCCTACCCCGGCACGCTGCTTTCGCCGGACGG GCGGCTCGTCGCCCCCTACGATCTCGAACGCCCGGGCGCCGACGCGCGCGGCCACGTCGGCGCGGCGGCCCGCGCCGGGC TGTTGCACGCGGCAAGCAGCCCGTTCACGCTGGATTACGCGACGTTGTCGACGGTTCACGTGATCAACGGGATGGGCGTC GCGCTCGGCGATTCGGTGATCGGGCTGACCGCGCTCGCGGCGATCAAGGCGCGGCATCCGCATGTGCATTTCGTGTTGTA CCGCCCCGCGCACGCGCCCGCGTACGTCGACGCGCTGTACCGGCTCGCGGCCGACGCAATCGCGCCGATCCGCGCGCTGC CGTGGCCCGCGGCGGAGCTGCCGGCGCGCGACACGCGCATCGACCTCGGCAATCACCTGTACTGGCCCGCATTCGCGGCG CGGCCGATGATCGACTTCTTTCTGGCGTCGCTCGGCGTGCCGCCCGAATCGATCCCGGCCGACGCGAAATGCAACCGCTG GCTCGCGCGGTTGACGCTGCCCCCGCTGCCGCCCGAGTGGCGCGACCGGCCGTACGCGCTGTTCTGCCCGCAGGCGAGCA CGCCGCTGCGCAGCATCCCGGCCGCGCAACGCGCGGCGCTCGTCGAGCGGCTCGCGCGCACCTATCGGCTGCCCGTGCTC GGCTTCGGGCCGATCGATCATCCGGACTATGTCGACGTGAGCGGCCACTCCACCGATACCGCGCAGTTCGTCAGCTGGGT CGGGCGGGCGCGCGTCGCGCTCTGCTCGGACACGTCGGCCGTGCACATCGCGGCCGGCTTCGACGTGCCGACGCTCGCGT GCTTTTCGAGCATCGCGCCCGAGTTGCGGGTGCGCGATTACCCGCTTTGCACGGCGATCGAACTCGATATGCCGGAGATG CTGCGCAATCGCCACAAAAGCGATGCGGCGAACGACATCGCGCAGGTCGACGCCGCGTATCGGCGCATCGATTGGGACGC GATCGCCTGGCCACCGGCGCGGGAATGA
Upstream 100 bases:
>100_bases CAGGACGCGTGCACGCCCGCCGCGACGCTCGAGCAGGTGCGCGAGCAAGGGCTGCGCGCGCGTCGCGCTTGACGATACGA CCGATGAACGCTCCCATGCG
Downstream 100 bases:
>100_bases GCATCGGCGCGGCGGGGTGACGATCTCGCGCGGTATGCGGCCGCCGCCGCAGCGTCGCCGGCTGGCCGGTGAACGCCGGC GGCCGGTGCGCCGCGCCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MTPTLDETALPPADALAYPGTLLSPDGRLVAPYDLERPGADARGHVGAAARAGLLHAASSPFTLDYATLSTVHVINGMGV ALGDSVIGLTALAAIKARHPHVHFVLYRPAHAPAYVDALYRLAADAIAPIRALPWPAAELPARDTRIDLGNHLYWPAFAA RPMIDFFLASLGVPPESIPADAKCNRWLARLTLPPLPPEWRDRPYALFCPQASTPLRSIPAAQRAALVERLARTYRLPVL GFGPIDHPDYVDVSGHSTDTAQFVSWVGRARVALCSDTSAVHIAAGFDVPTLACFSSIAPELRVRDYPLCTAIELDMPEM LRNRHKSDAANDIAQVDAAYRRIDWDAIAWPPARE
Sequences:
>Translated_355_residues MTPTLDETALPPADALAYPGTLLSPDGRLVAPYDLERPGADARGHVGAAARAGLLHAASSPFTLDYATLSTVHVINGMGV ALGDSVIGLTALAAIKARHPHVHFVLYRPAHAPAYVDALYRLAADAIAPIRALPWPAAELPARDTRIDLGNHLYWPAFAA RPMIDFFLASLGVPPESIPADAKCNRWLARLTLPPLPPEWRDRPYALFCPQASTPLRSIPAAQRAALVERLARTYRLPVL GFGPIDHPDYVDVSGHSTDTAQFVSWVGRARVALCSDTSAVHIAAGFDVPTLACFSSIAPELRVRDYPLCTAIELDMPEM LRNRHKSDAANDIAQVDAAYRRIDWDAIAWPPARE >Mature_354_residues TPTLDETALPPADALAYPGTLLSPDGRLVAPYDLERPGADARGHVGAAARAGLLHAASSPFTLDYATLSTVHVINGMGVA LGDSVIGLTALAAIKARHPHVHFVLYRPAHAPAYVDALYRLAADAIAPIRALPWPAAELPARDTRIDLGNHLYWPAFAAR PMIDFFLASLGVPPESIPADAKCNRWLARLTLPPLPPEWRDRPYALFCPQASTPLRSIPAAQRAALVERLARTYRLPVLG FGPIDHPDYVDVSGHSTDTAQFVSWVGRARVALCSDTSAVHIAAGFDVPTLACFSSIAPELRVRDYPLCTAIELDMPEML RNRHKSDAANDIAQVDAAYRRIDWDAIAWPPARE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38439; Mature: 38308
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTLDETALPPADALAYPGTLLSPDGRLVAPYDLERPGADARGHVGAAARAGLLHAASS CCCCCCCCCCCCHHHHCCCCCEECCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCC PFTLDYATLSTVHVINGMGVALGDSVIGLTALAAIKARHPHVHFVLYRPAHAPAYVDALY CCEEEHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHH RLAADAIAPIRALPWPAAELPARDTRIDLGNHLYWPAFAARPMIDFFLASLGVPPESIPA HHHHHHHHHHHHCCCCHHHCCCCCCEEECCCEEECCHHHHHHHHHHHHHHHCCCCCCCCC DAKCNRWLARLTLPPLPPEWRDRPYALFCPQASTPLRSIPAAQRAALVERLARTYRLPVL CCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHCCCEE GFGPIDHPDYVDVSGHSTDTAQFVSWVGRARVALCSDTSAVHIAAGFDVPTLACFSSIAP ECCCCCCCCEEECCCCCCHHHHHHHHHHHHEEEEECCCCEEEEEECCCCHHHHHHHHCCC ELRVRDYPLCTAIELDMPEMLRNRHKSDAANDIAQVDAAYRRIDWDAIAWPPARE CCEECCCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TPTLDETALPPADALAYPGTLLSPDGRLVAPYDLERPGADARGHVGAAARAGLLHAASS CCCCCCCCCCCHHHHCCCCCEECCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCC PFTLDYATLSTVHVINGMGVALGDSVIGLTALAAIKARHPHVHFVLYRPAHAPAYVDALY CCEEEHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHH RLAADAIAPIRALPWPAAELPARDTRIDLGNHLYWPAFAARPMIDFFLASLGVPPESIPA HHHHHHHHHHHHCCCCHHHCCCCCCEEECCCEEECCHHHHHHHHHHHHHHHCCCCCCCCC DAKCNRWLARLTLPPLPPEWRDRPYALFCPQASTPLRSIPAAQRAALVERLARTYRLPVL CCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHCCCEE GFGPIDHPDYVDVSGHSTDTAQFVSWVGRARVALCSDTSAVHIAAGFDVPTLACFSSIAP ECCCCCCCCEEECCCCCCHHHHHHHHHHHHEEEEECCCCEEEEEECCCCHHHHHHHHCCC ELRVRDYPLCTAIELDMPEMLRNRHKSDAANDIAQVDAAYRRIDWDAIAWPPARE CCEECCCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA