| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814299
Identifier: 237814299
GI number: 237814299
Start: 3921119
End: 3921589
Strand: Reverse
Name: 237814299
Synonym: GBP346_A4095
Alternate gene names: NA
Gene position: 3921589-3921119 (Counterclockwise)
Preceding gene: 237814303
Following gene: 237814296
Centisome position: 95.68
GC content: 65.82
Gene sequence:
>471_bases ATGCGCGGCATGAAGCGGGGTGGTTTTGAGAACGGTCATCGGGGTCCCAGGCAAGGCGGCCGGGCCTTGAGCCCGGGCGC GAAAACAAAATGGCAACTCGGCGAACCGCCGGCGCATGAAGCCGCCTGCGATGCGTGCATGCCCCTCTGTCCTCGATACC TGAGAGATTGCGCGACGGTTTCGATCCGGCTCGCGCGCGCCCCTTCGGTGGGCAGCCTGCCCGTGCGTCGCGTTGCGCGC ACGCGGCTACTGCCGCTCTCCAGAGTGCGAAAAACGCCGTCCGACGCATGTCGTCAGACGGATTCTTCGACGCGGTCGGT CCTTTTGCCTGAGAGTTTGCGGGTGTGCCCCTTCGGCGGCGCGGCTTGCCTTTCGATCAACGAACGGCGGCCGCGCGCTC TCCCGACGCGTGCGGGCGAATGTACGCGAGCGCGGATGGGTTGTCAATTTGGGCAAATCGCTGTCGCTTGA
Upstream 100 bases:
>100_bases CGGCATCGGTGCGCACCGCCTGGTGCTCTTCGATCTGCGAGCCGTAGTTGACGGGCATGTCCCAGCCGCCGAAATCGACC ATGCGGGCGTTGAGGGCGCG
Downstream 100 bases:
>100_bases AGACAAGCGGCGGCGGTTGCCGGGCGTGGGCGGCACGGTCGCGAAGGCGGCGGGCGCTTGCTCGCCGATGCGCTGAGCGG TGAGCGGTGAGCGGTGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MRGMKRGGFENGHRGPRQGGRALSPGAKTKWQLGEPPAHEAACDACMPLCPRYLRDCATVSIRLARAPSVGSLPVRRVAR TRLLPLSRVRKTPSDACRQTDSSTRSVLLPESLRVCPFGGAACLSINERRPRALPTRAGECTRARMGCQFGQIAVA
Sequences:
>Translated_156_residues MRGMKRGGFENGHRGPRQGGRALSPGAKTKWQLGEPPAHEAACDACMPLCPRYLRDCATVSIRLARAPSVGSLPVRRVAR TRLLPLSRVRKTPSDACRQTDSSTRSVLLPESLRVCPFGGAACLSINERRPRALPTRAGECTRARMGCQFGQIAVA >Mature_156_residues MRGMKRGGFENGHRGPRQGGRALSPGAKTKWQLGEPPAHEAACDACMPLCPRYLRDCATVSIRLARAPSVGSLPVRRVAR TRLLPLSRVRKTPSDACRQTDSSTRSVLLPESLRVCPFGGAACLSINERRPRALPTRAGECTRARMGCQFGQIAVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16880; Mature: 16880
Theoretical pI: Translated: 11.73; Mature: 11.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGMKRGGFENGHRGPRQGGRALSPGAKTKWQLGEPPAHEAACDACMPLCPRYLRDCATV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SIRLARAPSVGSLPVRRVARTRLLPLSRVRKTPSDACRQTDSSTRSVLLPESLRVCPFGG EEEEECCCCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHCCCCCCEEECCCCCCCCCCCC AACLSINERRPRALPTRAGECTRARMGCQFGQIAVA EEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCEECC >Mature Secondary Structure MRGMKRGGFENGHRGPRQGGRALSPGAKTKWQLGEPPAHEAACDACMPLCPRYLRDCATV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SIRLARAPSVGSLPVRRVARTRLLPLSRVRKTPSDACRQTDSSTRSVLLPESLRVCPFGG EEEEECCCCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHCCCCCCEEECCCCCCCCCCCC AACLSINERRPRALPTRAGECTRARMGCQFGQIAVA EEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA