Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

Click here to switch to the map view.

The map label for this gene is 237814298

Identifier: 237814298

GI number: 237814298

Start: 3920406

End: 3920765

Strand: Direct

Name: 237814298

Synonym: GBP346_A4094

Alternate gene names: NA

Gene position: 3920406-3920765 (Clockwise)

Preceding gene: 237814297

Following gene: 237814300

Centisome position: 95.65

GC content: 70.28

Gene sequence:

>360_bases
ATGCAACGGTTGATCCGCGCGGCGGCATGCTGCGTCCTCGTCTCGTCGCTCGCGGCATGTGTGGTCACGCCGCCGCGTCC
GGCGCCCGCGCCCGCGCCGCGCCCCAGTCCGCAGGTGGTCGGCTATGAGCGGATGCAACAGATCCAGGGCCGCATCGATA
ACCTGAGTCACCGAATCGACGCGCGTGTGAACGCCGGCTACTATCCGCCGCCGCAAGGCGCCGCGCTGCATCGCCGGCTC
GACGTGATCCGCCAGGAGTCGACCGACATGGCGGCTCAACACGGCGGCGGCCTGTCCGGTGACGAGCAGCGCGTGCTCAA
CCAGGAACTCGACGTCGCCGCGCGCGCGATCGGCGAATGA

Upstream 100 bases:

>100_bases
ACAAACGGTTACAAACAATCCGGAAACGAACGTCATCTCAATGCCGGCCTGAGCCGTTCGTCCATTTGCCTGTCCGGCAT
CGACAATCAGGAGAATTGCA

Downstream 100 bases:

>100_bases
ACGTCCGTCGGCCGGCCGCCTTCGAGCCTCCGGCCGACGACGTCCCGACGCATGGTTTCGGCGCCCTTCCCGCCCAAGCC
GCGCGCACCGTCGAAACGCT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MQRLIRAAACCVLVSSLAACVVTPPRPAPAPAPRPSPQVVGYERMQQIQGRIDNLSHRIDARVNAGYYPPPQGAALHRRL
DVIRQESTDMAAQHGGGLSGDEQRVLNQELDVAARAIGE

Sequences:

>Translated_119_residues
MQRLIRAAACCVLVSSLAACVVTPPRPAPAPAPRPSPQVVGYERMQQIQGRIDNLSHRIDARVNAGYYPPPQGAALHRRL
DVIRQESTDMAAQHGGGLSGDEQRVLNQELDVAARAIGE
>Mature_119_residues
MQRLIRAAACCVLVSSLAACVVTPPRPAPAPAPRPSPQVVGYERMQQIQGRIDNLSHRIDARVNAGYYPPPQGAALHRRL
DVIRQESTDMAAQHGGGLSGDEQRVLNQELDVAARAIGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12816; Mature: 12816

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRLIRAAACCVLVSSLAACVVTPPRPAPAPAPRPSPQVVGYERMQQIQGRIDNLSHRID
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ARVNAGYYPPPQGAALHRRLDVIRQESTDMAAQHGGGLSGDEQRVLNQELDVAARAIGE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQRLIRAAACCVLVSSLAACVVTPPRPAPAPAPRPSPQVVGYERMQQIQGRIDNLSHRID
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ARVNAGYYPPPQGAALHRRLDVIRQESTDMAAQHGGGLSGDEQRVLNQELDVAARAIGE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA