| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814298
Identifier: 237814298
GI number: 237814298
Start: 3920406
End: 3920765
Strand: Direct
Name: 237814298
Synonym: GBP346_A4094
Alternate gene names: NA
Gene position: 3920406-3920765 (Clockwise)
Preceding gene: 237814297
Following gene: 237814300
Centisome position: 95.65
GC content: 70.28
Gene sequence:
>360_bases ATGCAACGGTTGATCCGCGCGGCGGCATGCTGCGTCCTCGTCTCGTCGCTCGCGGCATGTGTGGTCACGCCGCCGCGTCC GGCGCCCGCGCCCGCGCCGCGCCCCAGTCCGCAGGTGGTCGGCTATGAGCGGATGCAACAGATCCAGGGCCGCATCGATA ACCTGAGTCACCGAATCGACGCGCGTGTGAACGCCGGCTACTATCCGCCGCCGCAAGGCGCCGCGCTGCATCGCCGGCTC GACGTGATCCGCCAGGAGTCGACCGACATGGCGGCTCAACACGGCGGCGGCCTGTCCGGTGACGAGCAGCGCGTGCTCAA CCAGGAACTCGACGTCGCCGCGCGCGCGATCGGCGAATGA
Upstream 100 bases:
>100_bases ACAAACGGTTACAAACAATCCGGAAACGAACGTCATCTCAATGCCGGCCTGAGCCGTTCGTCCATTTGCCTGTCCGGCAT CGACAATCAGGAGAATTGCA
Downstream 100 bases:
>100_bases ACGTCCGTCGGCCGGCCGCCTTCGAGCCTCCGGCCGACGACGTCCCGACGCATGGTTTCGGCGCCCTTCCCGCCCAAGCC GCGCGCACCGTCGAAACGCT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MQRLIRAAACCVLVSSLAACVVTPPRPAPAPAPRPSPQVVGYERMQQIQGRIDNLSHRIDARVNAGYYPPPQGAALHRRL DVIRQESTDMAAQHGGGLSGDEQRVLNQELDVAARAIGE
Sequences:
>Translated_119_residues MQRLIRAAACCVLVSSLAACVVTPPRPAPAPAPRPSPQVVGYERMQQIQGRIDNLSHRIDARVNAGYYPPPQGAALHRRL DVIRQESTDMAAQHGGGLSGDEQRVLNQELDVAARAIGE >Mature_119_residues MQRLIRAAACCVLVSSLAACVVTPPRPAPAPAPRPSPQVVGYERMQQIQGRIDNLSHRIDARVNAGYYPPPQGAALHRRL DVIRQESTDMAAQHGGGLSGDEQRVLNQELDVAARAIGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12816; Mature: 12816
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRLIRAAACCVLVSSLAACVVTPPRPAPAPAPRPSPQVVGYERMQQIQGRIDNLSHRID CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH ARVNAGYYPPPQGAALHRRLDVIRQESTDMAAQHGGGLSGDEQRVLNQELDVAARAIGE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQRLIRAAACCVLVSSLAACVVTPPRPAPAPAPRPSPQVVGYERMQQIQGRIDNLSHRID CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH ARVNAGYYPPPQGAALHRRLDVIRQESTDMAAQHGGGLSGDEQRVLNQELDVAARAIGE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA