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The map label for this gene is flhF [H]

Identifier: 237814233

GI number: 237814233

Start: 3858349

End: 3860100

Strand: Reverse

Name: flhF [H]

Synonym: GBP346_A4028

Alternate gene names: 237814233

Gene position: 3860100-3858349 (Counterclockwise)

Preceding gene: 237814234

Following gene: 237814232

Centisome position: 94.18

GC content: 71.92

Gene sequence:

>1752_bases
TTGAACATTCGCAAATTCATTGGTCCGACGAGCCGCGACGCGCTGCGCCTCGTGCGCGAAGCGATGGGCGCCGACGCGGC
GGTACTGTCCAACCGGACGCTCGAAGACGGGCGCGTCGAGATCGTCGCGCTGCCCGCCGCCGAGCTCGCCGAAATCTCGA
CGCGCCGCGCGGCCGACGCCGCGCATGGCGCGGCCCAGCCGCCTGCGCCGCGCCAGGGGGCGCAGCATGCGCCCTCGGGG
CCGTCGTTCGCGTCGCCCGCCGCATCGGTCGTCGTGCCGAGCGCCGCCTCCGGCGCATCGGCGCCGGCCTCGCGCGCCGC
CGCGAATCCGTACGCGGCGGGCGGCATGCCCGACGTGTTCTCGTCGGTGTTCGGCGCGAGTGTCGACGCGTCGGCCGACG
ACGATGCGCGGCCCGCCGTTTCGCCGCCCGTGCCGCCCGCGCTGCCGCCCGCCGCGCCGTCGGAGCCCGCGCCGTGGCTC
GTCGAGCACGCGAAGCGGCTGACGAAGCAGCACGAAGAGCTCATCGCGCGGCCGCGCGCCACCGCCGCCCTGCCTGCGCA
GAACGCGCCGCAAGCGCCGCGCGAGCGCGCGAGCGCCGACGAGGCGCCCGAATGGGCGCGCGACATCGTGCGCAACGCCG
CGCGCCGGCTGCCGGCCGACGAGCCCGCGGCGGCGAAGCCGGCGCTGCGCCTGCCCGAGGATACGGCGGCCGCCGTCGCG
GACGCGGTGAAGGCGCGTATCGAGCGCATCGTCAACGATACGGTGATGCAGGAGCTCGGCTCGCTGCGCGAGCTGATGGA
AGAGCAGTTCGCGGGCCTGATGTGGAACGAGCGCCAGCGCCGCAACCCGGTGCACGGCGCGCTGACGAAATACCTGTTCG
CGGCGGGCTTCTCCGCGCAACTCGTGCGGATGATCGTCGACAACCTGCCGGAAGGCGAGGGCTACGACACGCTCGACGCG
GCGGCGGACTGGGCGCAGTCGGTGCTCGCGGCGAACCTGCCCGTGCTCGACAGCGAGGACGCGCTGATGGAGCGCGGCGG
CGTGTTCGCGCTGATGGGCCCCACGGGCGTGGGCAAGACGACGACGACCGCGAAGCTCGCGGCGCGCTGCGTGATGCGCT
TCGGCGCGAGCAAGGTCGCGCTGCTCACGACGGACAGCTACCGGATCGGCGGCCACGAGCAACTGCGCATCTTCGGCAAG
ATCCTCGGCGTGCCGGTGCACGCGGTGAAGGACGGCGGCGATCTGCAGCTCGCGCTCGCCGAGCTGCGCAACAAGCACAT
GGTGCTGATCGACACGATCGGCATGAGCCAGCGCGACCGCACGGTGTCCGACCAGATCGCGATGCTGCACGGCGCGGATA
CGCCGGTGCAGCGCCTGCTGCTGCTCAACGCGACGAGCCACGGCGACACGCTCAACGAAGTCGTGCAGGCGTACCGCAGC
GCGGCCGGCCAACCGAAGGCGGCGTTGCCGGATCTCGCCGGCTGCATCCTCACGAAGCTCGACGAGGCGAGCAACCTGGG
CGGCGTGCTCGACACGGTGATCCGCTACAAGCTGCCGGTGCATTACGTGTCGACCGGCCAGAAGGTGCCCGAGAACCTGT
ACGTCGCGACGAAGAAATTCCTGCTCAAGAGCGCGTTCTGCGCGCCGCGCGAGGATTCGCCGTTCGTGCCCCATGACGAT
GACCTGCCGGCGATGCTGTCCGCGTTGAGCACGCGCACCGGCAACGAACTGCACGAGGTCCGCTTTGGATAA

Upstream 100 bases:

>100_bases
GCTTCCTGCGCCGCAGCCTGCCGCAATTGAAAGTGCTGTCCTACGCCGAAGTGCCGGACACGCGCACGATCAAGGTCGTT
AACGTCATCGGGGGTACCGC

Downstream 100 bases:

>100_bases
GCGCATCACCGATCAGGCTGAAGGGCTGCGGCGCCTGCTCGCCGGACGCGCGTCGCGCGTCGTCGCGGTGACGGGTGGGC
CGTCGGGCGTCGGCTGCACG

Product: flagellar biosynthesis regulator FlhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 583; Mature: 583

Protein sequence:

>583_residues
MNIRKFIGPTSRDALRLVREAMGADAAVLSNRTLEDGRVEIVALPAAELAEISTRRAADAAHGAAQPPAPRQGAQHAPSG
PSFASPAASVVVPSAASGASAPASRAAANPYAAGGMPDVFSSVFGASVDASADDDARPAVSPPVPPALPPAAPSEPAPWL
VEHAKRLTKQHEELIARPRATAALPAQNAPQAPRERASADEAPEWARDIVRNAARRLPADEPAAAKPALRLPEDTAAAVA
DAVKARIERIVNDTVMQELGSLRELMEEQFAGLMWNERQRRNPVHGALTKYLFAAGFSAQLVRMIVDNLPEGEGYDTLDA
AADWAQSVLAANLPVLDSEDALMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGK
ILGVPVHAVKDGGDLQLALAELRNKHMVLIDTIGMSQRDRTVSDQIAMLHGADTPVQRLLLLNATSHGDTLNEVVQAYRS
AAGQPKAALPDLAGCILTKLDEASNLGGVLDTVIRYKLPVHYVSTGQKVPENLYVATKKFLLKSAFCAPREDSPFVPHDD
DLPAMLSALSTRTGNELHEVRFG

Sequences:

>Translated_583_residues
MNIRKFIGPTSRDALRLVREAMGADAAVLSNRTLEDGRVEIVALPAAELAEISTRRAADAAHGAAQPPAPRQGAQHAPSG
PSFASPAASVVVPSAASGASAPASRAAANPYAAGGMPDVFSSVFGASVDASADDDARPAVSPPVPPALPPAAPSEPAPWL
VEHAKRLTKQHEELIARPRATAALPAQNAPQAPRERASADEAPEWARDIVRNAARRLPADEPAAAKPALRLPEDTAAAVA
DAVKARIERIVNDTVMQELGSLRELMEEQFAGLMWNERQRRNPVHGALTKYLFAAGFSAQLVRMIVDNLPEGEGYDTLDA
AADWAQSVLAANLPVLDSEDALMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGK
ILGVPVHAVKDGGDLQLALAELRNKHMVLIDTIGMSQRDRTVSDQIAMLHGADTPVQRLLLLNATSHGDTLNEVVQAYRS
AAGQPKAALPDLAGCILTKLDEASNLGGVLDTVIRYKLPVHYVSTGQKVPENLYVATKKFLLKSAFCAPREDSPFVPHDD
DLPAMLSALSTRTGNELHEVRFG
>Mature_583_residues
MNIRKFIGPTSRDALRLVREAMGADAAVLSNRTLEDGRVEIVALPAAELAEISTRRAADAAHGAAQPPAPRQGAQHAPSG
PSFASPAASVVVPSAASGASAPASRAAANPYAAGGMPDVFSSVFGASVDASADDDARPAVSPPVPPALPPAAPSEPAPWL
VEHAKRLTKQHEELIARPRATAALPAQNAPQAPRERASADEAPEWARDIVRNAARRLPADEPAAAKPALRLPEDTAAAVA
DAVKARIERIVNDTVMQELGSLRELMEEQFAGLMWNERQRRNPVHGALTKYLFAAGFSAQLVRMIVDNLPEGEGYDTLDA
AADWAQSVLAANLPVLDSEDALMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGK
ILGVPVHAVKDGGDLQLALAELRNKHMVLIDTIGMSQRDRTVSDQIAMLHGADTPVQRLLLLNATSHGDTLNEVVQAYRS
AAGQPKAALPDLAGCILTKLDEASNLGGVLDTVIRYKLPVHYVSTGQKVPENLYVATKKFLLKSAFCAPREDSPFVPHDD
DLPAMLSALSTRTGNELHEVRFG

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Escherichia coli, GI1789874, Length=253, Percent_Identity=26.0869565217391, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 61746; Mature: 61746

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRKFIGPTSRDALRLVREAMGADAAVLSNRTLEDGRVEIVALPAAELAEISTRRAADA
CCCHHHCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHH
AHGAAQPPAPRQGAQHAPSGPSFASPAASVVVPSAASGASAPASRAAANPYAAGGMPDVF
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCCCCHHHH
SSVFGASVDASADDDARPAVSPPVPPALPPAAPSEPAPWLVEHAKRLTKQHEELIARPRA
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
TAALPAQNAPQAPRERASADEAPEWARDIVRNAARRLPADEPAAAKPALRLPEDTAAAVA
CCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
DAVKARIERIVNDTVMQELGSLRELMEEQFAGLMWNERQRRNPVHGALTKYLFAAGFSAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCHHHH
LVRMIVDNLPEGEGYDTLDAAADWAQSVLAANLPVLDSEDALMERGGVFALMGPTGVGKT
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEECCCCCCCC
TTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKILGVPVHAVKDGGDLQLALA
HHHHHHHHHHHHHHCCCEEEEEEECCEECCCHHHHHHHHHHHCCCCEEECCCCCHHHHHH
ELRNKHMVLIDTIGMSQRDRTVSDQIAMLHGADTPVQRLLLLNATSHGDTLNEVVQAYRS
HHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH
AAGQPKAALPDLAGCILTKLDEASNLGGVLDTVIRYKLPVHYVSTGQKVPENLYVATKKF
HCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHH
LLKSAFCAPREDSPFVPHDDDLPAMLSALSTRTGNELHEVRFG
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCC
>Mature Secondary Structure
MNIRKFIGPTSRDALRLVREAMGADAAVLSNRTLEDGRVEIVALPAAELAEISTRRAADA
CCCHHHCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHH
AHGAAQPPAPRQGAQHAPSGPSFASPAASVVVPSAASGASAPASRAAANPYAAGGMPDVF
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCCCCHHHH
SSVFGASVDASADDDARPAVSPPVPPALPPAAPSEPAPWLVEHAKRLTKQHEELIARPRA
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
TAALPAQNAPQAPRERASADEAPEWARDIVRNAARRLPADEPAAAKPALRLPEDTAAAVA
CCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
DAVKARIERIVNDTVMQELGSLRELMEEQFAGLMWNERQRRNPVHGALTKYLFAAGFSAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCHHHH
LVRMIVDNLPEGEGYDTLDAAADWAQSVLAANLPVLDSEDALMERGGVFALMGPTGVGKT
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEECCCCCCCC
TTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKILGVPVHAVKDGGDLQLALA
HHHHHHHHHHHHHHCCCEEEEEEECCEECCCHHHHHHHHHHHCCCCEEECCCCCHHHHHH
ELRNKHMVLIDTIGMSQRDRTVSDQIAMLHGADTPVQRLLLLNATSHGDTLNEVVQAYRS
HHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH
AAGQPKAALPDLAGCILTKLDEASNLGGVLDTVIRYKLPVHYVSTGQKVPENLYVATKKF
HCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHH
LLKSAFCAPREDSPFVPHDDDLPAMLSALSTRTGNELHEVRFG
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]