| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is mosC [H]
Identifier: 237814221
GI number: 237814221
Start: 3846757
End: 3847965
Strand: Direct
Name: mosC [H]
Synonym: GBP346_A4016
Alternate gene names: 237814221
Gene position: 3846757-3847965 (Clockwise)
Preceding gene: 237814217
Following gene: 237814225
Centisome position: 93.86
GC content: 72.87
Gene sequence:
>1209_bases GTGTCCGACCAGTCGCCCGATCTCGCCTCGCCCGCCTCAGCCCATCGCCGGCTTCCCGCCTCCGCCCGCCACCGCGCGCG GGCGGCCACGATGGCGCTTTTCTTCGTCGCCGGCATGATGTACGCGTCATGGGGCGTGCACGTGCCGACGGTGCGCGACA AGTTCACGCTGTCGCCCGCGCTGCTGTCGTTCGCACTCCTCGCGGTCGCGATCGGCTCGATCGTCGCGATGACGACCAAC GCGCGCTGGATCGCGCGCGTCGGCTCGCGCACCGCGTGCCTCGCCGGCGGCCTCGCGATGTCCGCGAGCGGCGCGCTGAT CCTCGTCGTGCCGACCTACCCACTGCTGCTCGCGGTGCTCGCGCTGTTCGGCTTCTCGATGGCGACGCTCGACGTGGCGA TGAACGCCGAGGCGAGCGCCGTCGAATCGGCATTCGGCAAACCGATCATGTCGATGCTGCACGGCATGTTCAGCGTCGGC GGGATGGCGGGCGCAGCGGCGGGCGGCGCGCTGCTGTCGGCCGGCATGGCGAGCGCCGTGCATCTCGGGCTCGCCGCGCT CGCGAGCGCGCTCGTGCTCGCGCTTGCGTGCCCGGCCGTGCTGCCGCATGTCCCGCACACGGCCGCCGCGGACGGCGCCC CGCGCGTGAACCGCTGGCGCTCGCCCGCGCTGTGGGCGCTCGGCGCCATCGCGCTCGTCGCGTTGATCGCCGAAGGCGCG ATGTACGACTGGGCGACTGTTTACATGCGCGACGTCGTCCTCGCGTCGCCGGCGTTCTCGAGCGCCGCCTATGCGGCGTT CTCGGGCGGCATGGCCGCCGCGCGCTTCGCGGGCGATGCGGTTCGCGCGCGCTTCGGCGCCCCGCAGCTCGTCTGCGCGA GCGCGACGCTCGCGTGCGTCGGCATGATCGCCGCGCTCGCGCTGCCGTCCCCCTTCGTCGCGCTCGCGGGCTTCACACTG ATGGGCCTCGGCCTCGCCAACATGATGCCCGTGCTGTTCGCCGCCGCCGCGCGGATCGACGGCATTCACGCGGCCGAAGG GCTCGCGCACGTCGCGGGACTCGCGTACTTCGGGCTGCTGTTCGGTCCGGTCGCGATCGGCGCGGTCACGCAGGCGGCCA ACCTGTCGGTCGGGCTGTCGATCGTCGCTCTGTGCGCGGCGCTCGTCGCAATCGTCGCGCCGAAGGTGCTGAGCCGGCTG AAAATCTGA
Upstream 100 bases:
>100_bases AAGTGCACCGCGCTCCGCTAGAATCGGCGCTGTTTCGTTAAGCGCGATGTAAGCTTCGCGCGCCGTTCGCAGCCGATCGC CTTCCTTCGCCCAGCTTCCC
Downstream 100 bases:
>100_bases GCCCGCGATCGGCGAGCCTGCAAGAAAACACCCGGGCGTGGCGGCATGATGATGGGATGGCATGAGCGCCGGGCGGCCGC TCGCTCGGCCTGCGCCGCGC
Product: putative amino acid ABC transporter, permease protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MSDQSPDLASPASAHRRLPASARHRARAATMALFFVAGMMYASWGVHVPTVRDKFTLSPALLSFALLAVAIGSIVAMTTN ARWIARVGSRTACLAGGLAMSASGALILVVPTYPLLLAVLALFGFSMATLDVAMNAEASAVESAFGKPIMSMLHGMFSVG GMAGAAAGGALLSAGMASAVHLGLAALASALVLALACPAVLPHVPHTAAADGAPRVNRWRSPALWALGAIALVALIAEGA MYDWATVYMRDVVLASPAFSSAAYAAFSGGMAAARFAGDAVRARFGAPQLVCASATLACVGMIAALALPSPFVALAGFTL MGLGLANMMPVLFAAAARIDGIHAAEGLAHVAGLAYFGLLFGPVAIGAVTQAANLSVGLSIVALCAALVAIVAPKVLSRL KI
Sequences:
>Translated_402_residues MSDQSPDLASPASAHRRLPASARHRARAATMALFFVAGMMYASWGVHVPTVRDKFTLSPALLSFALLAVAIGSIVAMTTN ARWIARVGSRTACLAGGLAMSASGALILVVPTYPLLLAVLALFGFSMATLDVAMNAEASAVESAFGKPIMSMLHGMFSVG GMAGAAAGGALLSAGMASAVHLGLAALASALVLALACPAVLPHVPHTAAADGAPRVNRWRSPALWALGAIALVALIAEGA MYDWATVYMRDVVLASPAFSSAAYAAFSGGMAAARFAGDAVRARFGAPQLVCASATLACVGMIAALALPSPFVALAGFTL MGLGLANMMPVLFAAAARIDGIHAAEGLAHVAGLAYFGLLFGPVAIGAVTQAANLSVGLSIVALCAALVAIVAPKVLSRL KI >Mature_401_residues SDQSPDLASPASAHRRLPASARHRARAATMALFFVAGMMYASWGVHVPTVRDKFTLSPALLSFALLAVAIGSIVAMTTNA RWIARVGSRTACLAGGLAMSASGALILVVPTYPLLLAVLALFGFSMATLDVAMNAEASAVESAFGKPIMSMLHGMFSVGG MAGAAAGGALLSAGMASAVHLGLAALASALVLALACPAVLPHVPHTAAADGAPRVNRWRSPALWALGAIALVALIAEGAM YDWATVYMRDVVLASPAFSSAAYAAFSGGMAAARFAGDAVRARFGAPQLVCASATLACVGMIAALALPSPFVALAGFTLM GLGLANMMPVLFAAAARIDGIHAAEGLAHVAGLAYFGLLFGPVAIGAVTQAANLSVGLSIVALCAALVAIVAPKVLSRLK I
Specific function: May be a membrane transport protein that could either transport a precursor for rhizopine biosynthesis into bacteroids or the finished product from the bacteroids [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787068, Length=375, Percent_Identity=32.5333333333333, Blast_Score=140, Evalue=2e-34,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 40405; Mature: 40274
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQSPDLASPASAHRRLPASARHRARAATMALFFVAGMMYASWGVHVPTVRDKFTLSPA CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH LLSFALLAVAIGSIVAMTTNARWIARVGSRTACLAGGLAMSASGALILVVPTYPLLLAVL HHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHCCHHCCCCCCEEEEECCHHHHHHHH ALFGFSMATLDVAMNAEASAVESAFGKPIMSMLHGMFSVGGMAGAAAGGALLSAGMASAV HHHCCHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH HLGLAALASALVLALACPAVLPHVPHTAAADGAPRVNRWRSPALWALGAIALVALIAEGA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCC MYDWATVYMRDVVLASPAFSSAAYAAFSGGMAAARFAGDAVRARFGAPQLVCASATLACV HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH GMIAALALPSPFVALAGFTLMGLGLANMMPVLFAAAARIDGIHAAEGLAHVAGLAYFGLL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH FGPVAIGAVTQAANLSVGLSIVALCAALVAIVAPKVLSRLKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDQSPDLASPASAHRRLPASARHRARAATMALFFVAGMMYASWGVHVPTVRDKFTLSPA CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH LLSFALLAVAIGSIVAMTTNARWIARVGSRTACLAGGLAMSASGALILVVPTYPLLLAVL HHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHCCHHCCCCCCEEEEECCHHHHHHHH ALFGFSMATLDVAMNAEASAVESAFGKPIMSMLHGMFSVGGMAGAAAGGALLSAGMASAV HHHCCHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH HLGLAALASALVLALACPAVLPHVPHTAAADGAPRVNRWRSPALWALGAIALVALIAEGA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCC MYDWATVYMRDVVLASPAFSSAAYAAFSGGMAAARFAGDAVRARFGAPQLVCASATLACV HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH GMIAALALPSPFVALAGFTLMGLGLANMMPVLFAAAARIDGIHAAEGLAHVAGLAYFGLL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH FGPVAIGAVTQAANLSVGLSIVALCAALVAIVAPKVLSRLKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8349559; 7551036 [H]