| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814199
Identifier: 237814199
GI number: 237814199
Start: 3832052
End: 3832543
Strand: Reverse
Name: 237814199
Synonym: GBP346_A3993
Alternate gene names: NA
Gene position: 3832543-3832052 (Counterclockwise)
Preceding gene: 237814202
Following gene: 237814198
Centisome position: 93.51
GC content: 59.76
Gene sequence:
>492_bases ATGGGCAAACGGGAATGGCGCGCGCGCACGCGTTTCGCGGCAAACATCGGCGATGCGCGTCACGCGTTTGTCGATTGCGT GAATACCGAAACGAACGACGAGCCGGTCATTTCACTGCGTCGAGTCGCGCTCGCGTGCTCGTTCGTGCGCCGCATCGCGG CGTTTGCCGAAGCGAAGTGCTGCGATTCGACGCAACGCTGCGCCGTTCACGCAATCATCGCCGCGCGTGGTTTCGAATCG CGCGATTTCATCGGCATGCTTCGCGAGCGGCGAGCGCCTCGGTCAACCGACTCACTGGCTAACCGGCCGGTACCGGTCAT CACGGCGCCGCTTCCTGCGCGACACGCTCGTTTGCCGAACCGAATTCGTCCGAATCCGGAATGTGATCCGACGGTATCGA ATGCCGAGATGCGATCCGCATCATCAAAAAATCGATGCATCACATTTGATCGAGCTCCGGAAAATCATCCGCCGATCGTG CTATCTATTTGA
Upstream 100 bases:
>100_bases CGTGATATCGTTTGTGGCGGCGAACCGATTTTCGCCGGCGTCGAACGTCGCTCGAGCATGGCACGCTTTGTCACGGCGAT GCGTGTGCGCGGCGTCTTTG
Downstream 100 bases:
>100_bases TCCGTCGAGCCGAATTCGAATCGCGTCGAAAGTCGCGCATCGCGTGTCAACGCGGCCCGCACGCGCTGCGTTATAGAGCT GGCGCATGAGCATTCAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MGKREWRARTRFAANIGDARHAFVDCVNTETNDEPVISLRRVALACSFVRRIAAFAEAKCCDSTQRCAVHAIIAARGFES RDFIGMLRERRAPRSTDSLANRPVPVITAPLPARHARLPNRIRPNPECDPTVSNAEMRSASSKNRCITFDRAPENHPPIV LSI
Sequences:
>Translated_163_residues MGKREWRARTRFAANIGDARHAFVDCVNTETNDEPVISLRRVALACSFVRRIAAFAEAKCCDSTQRCAVHAIIAARGFES RDFIGMLRERRAPRSTDSLANRPVPVITAPLPARHARLPNRIRPNPECDPTVSNAEMRSASSKNRCITFDRAPENHPPIV LSI >Mature_162_residues GKREWRARTRFAANIGDARHAFVDCVNTETNDEPVISLRRVALACSFVRRIAAFAEAKCCDSTQRCAVHAIIAARGFESR DFIGMLRERRAPRSTDSLANRPVPVITAPLPARHARLPNRIRPNPECDPTVSNAEMRSASSKNRCITFDRAPENHPPIVL SI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18190; Mature: 18059
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKREWRARTRFAANIGDARHAFVDCVNTETNDEPVISLRRVALACSFVRRIAAFAEAKC CCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH CDSTQRCAVHAIIAARGFESRDFIGMLRERRAPRSTDSLANRPVPVITAPLPARHARLPN CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCEEECCCCHHHHCCCC RIRPNPECDPTVSNAEMRSASSKNRCITFDRAPENHPPIVLSI CCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCEEEEC >Mature Secondary Structure GKREWRARTRFAANIGDARHAFVDCVNTETNDEPVISLRRVALACSFVRRIAAFAEAKC CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH CDSTQRCAVHAIIAARGFESRDFIGMLRERRAPRSTDSLANRPVPVITAPLPARHARLPN CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCEEECCCCHHHHCCCC RIRPNPECDPTVSNAEMRSASSKNRCITFDRAPENHPPIVLSI CCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA