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The map label for this gene is ydeR [H]

Identifier: 237814193

GI number: 237814193

Start: 3828165

End: 3828860

Strand: Direct

Name: ydeR [H]

Synonym: GBP346_A3987

Alternate gene names: 237814193

Gene position: 3828165-3828860 (Clockwise)

Preceding gene: 237814191

Following gene: 237814196

Centisome position: 93.4

GC content: 77.73

Gene sequence:

>696_bases
GTGCTCGCCGCGAAGCTGCCGCTGCGCGCGCCGCAGCTGTCGACCCGCTACGCGGCGCTGCTCCGCTCGCTCTGGACGCT
CGTCGCGACCGAGCGCGTGCTGCAGCGGCGCGCGCTGTCCGCGGCGCTGTCGATGGCCGCGTTCAGCGCGTTCTGGACCG
CGATCGGCCTGCGTCTCGCCGCCGCGCCGTTCGATCTCGGCCTGCACGGCATCGCGATGTTCGCGTTCGCCGGCGCCACC
GGCGCGATCGTCACGCCGTTCGCGGGCCTGGCCGGCGACCGCGGCCGGGAGCGCGACGCGCTGCGCGACGCGCTGCGCGG
CGCGCACGTAGCGATGCTCGCCGCGTTGGCCGCGCTCGGCGTCGCGGGGGCCGGCTGGGGCGGATTCGACGCGGCCGCGC
ATCCGGCGCTCGCGCTCGCGCTGCTCGTCGCCGGTGCGGCGGCGCTCGACGCGGGCGTCGTCGCCGATCAGACGCTCGGC
CGGCGCGCGATCAATCTGCTCGATCCCGCCATGCGCGGGCGGCTCAACGGGCTGTTCGTCGGCCTGTTCTTCGTCGGCGG
CTCGCTCGGCGCCGTGCTCGCCGGCGCGGCATGGGCCTGGGCGGGCTGGGGCGCGGTGTGCGCGGTAGGGCTCGTGTTTG
CGGGCGCCGCGTTCGCGCTGGACTGGATCGGCGCGCACGGGCCGGCGCCCCGCTGA

Upstream 100 bases:

>100_bases
CCGACGAACGGCGCGGCCGCGCGGTCGGCAACGTGATGAGCGGCCTGATGCTCGGCATCCTGCTGTCGCGGCCGCGGCCG
CCGATATCGCGATCGCCGCG

Downstream 100 bases:

>100_bases
AACGACGACGCCCCGCGCCGTCACCGACGCGGGGCGTTTCATTCGTTCATGCGGCGCGGCGGGGCGCGCCGAGCCTGCCG
CGCGCGTGTTTCAGTGCCGC

Product: MFS permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MLAAKLPLRAPQLSTRYAALLRSLWTLVATERVLQRRALSAALSMAAFSAFWTAIGLRLAAAPFDLGLHGIAMFAFAGAT
GAIVTPFAGLAGDRGRERDALRDALRGAHVAMLAALAALGVAGAGWGGFDAAAHPALALALLVAGAAALDAGVVADQTLG
RRAINLLDPAMRGRLNGLFVGLFFVGGSLGAVLAGAAWAWAGWGAVCAVGLVFAGAAFALDWIGAHGPAPR

Sequences:

>Translated_231_residues
MLAAKLPLRAPQLSTRYAALLRSLWTLVATERVLQRRALSAALSMAAFSAFWTAIGLRLAAAPFDLGLHGIAMFAFAGAT
GAIVTPFAGLAGDRGRERDALRDALRGAHVAMLAALAALGVAGAGWGGFDAAAHPALALALLVAGAAALDAGVVADQTLG
RRAINLLDPAMRGRLNGLFVGLFFVGGSLGAVLAGAAWAWAGWGAVCAVGLVFAGAAFALDWIGAHGPAPR
>Mature_231_residues
MLAAKLPLRAPQLSTRYAALLRSLWTLVATERVLQRRALSAALSMAAFSAFWTAIGLRLAAAPFDLGLHGIAMFAFAGAT
GAIVTPFAGLAGDRGRERDALRDALRGAHVAMLAALAALGVAGAGWGGFDAAAHPALALALLVAGAAALDAGVVADQTLG
RRAINLLDPAMRGRLNGLFVGLFFVGGSLGAVLAGAAWAWAGWGAVCAVGLVFAGAAFALDWIGAHGPAPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 23331; Mature: 23331

Theoretical pI: Translated: 11.85; Mature: 11.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAAKLPLRAPQLSTRYAALLRSLWTLVATERVLQRRALSAALSMAAFSAFWTAIGLRLA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAPFDLGLHGIAMFAFAGATGAIVTPFAGLAGDRGRERDALRDALRGAHVAMLAALAALG
HCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VAGAGWGGFDAAAHPALALALLVAGAAALDAGVVADQTLGRRAINLLDPAMRGRLNGLFV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
GLFFVGGSLGAVLAGAAWAWAGWGAVCAVGLVFAGAAFALDWIGAHGPAPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLAAKLPLRAPQLSTRYAALLRSLWTLVATERVLQRRALSAALSMAAFSAFWTAIGLRLA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAPFDLGLHGIAMFAFAGATGAIVTPFAGLAGDRGRERDALRDALRGAHVAMLAALAALG
HCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VAGAGWGGFDAAAHPALALALLVAGAAALDAGVVADQTLGRRAINLLDPAMRGRLNGLFV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
GLFFVGGSLGAVLAGAAWAWAGWGAVCAVGLVFAGAAFALDWIGAHGPAPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]