| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814189
Identifier: 237814189
GI number: 237814189
Start: 3822886
End: 3824187
Strand: Direct
Name: 237814189
Synonym: GBP346_A3983
Alternate gene names: NA
Gene position: 3822886-3824187 (Clockwise)
Preceding gene: 237814188
Following gene: 237814190
Centisome position: 93.27
GC content: 68.89
Gene sequence:
>1302_bases GTGCCGCAATGCTCCGGTTCGAGCTGCGGCGTTCAGGGTCCGCCCAGCTCGACGGCGGCCAACACTTCGCTGTGCCCCGC CGACGCGAACATCGGCAGCAGCACCTATCTCGGCGGTGCCGGCGGCGGCGAGATCGTGAGCCTGAACATCAACGCGACCA CGATGACGTACACGCTCAAGTGGCTCGAGTCGCCGGTTCCGCTCGCCACCGGTACCGTCACGCCGACCCGCGCCGGCACG ACGATCACGGGCAGCGTCGCGCATCCGCCCGCGGGCACGCTGCCGACCGCCGAGCAGACGCGCTGCGCGTTCGTGCTGCT GCCCGGCAGCGGCACGGCGCCCGCGACGAATTCGACGTACTCGACCGCGGCCGACTTCAACCAGGCGAACCCGCCGATGA TCCTGATCGGCTTCGGCGTCGCGGGCGGCGGCATTCCGGGCGCGACGATCCAGTACAGCGGCCTCACGATCATCCCGGGC GTGCTGCAGAACATCGGCCAGGTGCCGCAGCGCCATTTCGACTTCTATCCGTTCCTCGGCTTCGCGAACACGACGACCGA TCTGTCGAAGCTGCCGGGCACGTACAACGCCCTCGTCTATCACACGGTGCCGTCGGGCAACTACGCGGCGAAGGCGATCG CATCGAACGAGACGTTCGATGCGAACGGCGCGTGCACATCGACGAGCGCATCGGGCTGCATGACGACCGGCAATCCGTGG ACGGCGAGCGGCAACGGCTACTTCAACAGCACGCAGGCGCCGCAGATCCTGCCGCAGACGCAGTTGCCGCTCATCGGCGC GACCGGCAAATCGGCCGTCGCGCACATGGTGCTCGGCCAGTTGAACGGCGCGACCGTGCCTGTCGTCGTGCGCACGGGCA ACGTGAATCTCGGCACGCCGCCGCTGCACACCGATGCGCAGGTGGACGACGAATCGGGCATCGCGGTGCTCGGGCTCGTG CAGGCGATCGCGTCGGGCGGCATCGACGGCGGCTACGCGGGCGCGGACTCGAACTTCAAGTACACGGCGACGGTGATCAA GGGCACGACGGGCACGTTCGTGAACCCGAGCACGCAGCAGGCCGAGACGGGCTTCACGCTCGACTACGGCCAGTCGACAC CGGGGCTGCTCGGCGTCACGACGACCGACACGTCGGCGCCGGGCTTCGTGATCGCGAGCGGCGGGCTATATGCGGCGCTG GTCCAGGGCACCGTCAACGGCGGCATCACGCAGAGCTCGGCGATCGCCGGCCAGACGCCGTCCGCGCCCTACTTCGGCGT AGGCGCGCAAGTCAGCAAGTAA
Upstream 100 bases:
>100_bases GTCGGACGCCTTTTCGAAAGGGGTGGCAATGGCCATAGCCGTCGCCCCTTTGTTTGCCGCTTGTAGTGGAGGGGGCGGCG GCACCCCGGCCCCCATCGCC
Downstream 100 bases:
>100_bases CGAGACCCGCACGCGCGGCCCGGCGACACGCGTCGCGCCGGGCCGCGCCGCAGCAGGCGACATCGAGAGCGGCCCAAGGG AGCCGGCCGCCGGATAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Large Exoprotein Involved In Heme Utilization Or Adhesion
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MPQCSGSSCGVQGPPSSTAANTSLCPADANIGSSTYLGGAGGGEIVSLNINATTMTYTLKWLESPVPLATGTVTPTRAGT TITGSVAHPPAGTLPTAEQTRCAFVLLPGSGTAPATNSTYSTAADFNQANPPMILIGFGVAGGGIPGATIQYSGLTIIPG VLQNIGQVPQRHFDFYPFLGFANTTTDLSKLPGTYNALVYHTVPSGNYAAKAIASNETFDANGACTSTSASGCMTTGNPW TASGNGYFNSTQAPQILPQTQLPLIGATGKSAVAHMVLGQLNGATVPVVVRTGNVNLGTPPLHTDAQVDDESGIAVLGLV QAIASGGIDGGYAGADSNFKYTATVIKGTTGTFVNPSTQQAETGFTLDYGQSTPGLLGVTTTDTSAPGFVIASGGLYAAL VQGTVNGGITQSSAIAGQTPSAPYFGVGAQVSK
Sequences:
>Translated_433_residues MPQCSGSSCGVQGPPSSTAANTSLCPADANIGSSTYLGGAGGGEIVSLNINATTMTYTLKWLESPVPLATGTVTPTRAGT TITGSVAHPPAGTLPTAEQTRCAFVLLPGSGTAPATNSTYSTAADFNQANPPMILIGFGVAGGGIPGATIQYSGLTIIPG VLQNIGQVPQRHFDFYPFLGFANTTTDLSKLPGTYNALVYHTVPSGNYAAKAIASNETFDANGACTSTSASGCMTTGNPW TASGNGYFNSTQAPQILPQTQLPLIGATGKSAVAHMVLGQLNGATVPVVVRTGNVNLGTPPLHTDAQVDDESGIAVLGLV QAIASGGIDGGYAGADSNFKYTATVIKGTTGTFVNPSTQQAETGFTLDYGQSTPGLLGVTTTDTSAPGFVIASGGLYAAL VQGTVNGGITQSSAIAGQTPSAPYFGVGAQVSK >Mature_432_residues PQCSGSSCGVQGPPSSTAANTSLCPADANIGSSTYLGGAGGGEIVSLNINATTMTYTLKWLESPVPLATGTVTPTRAGTT ITGSVAHPPAGTLPTAEQTRCAFVLLPGSGTAPATNSTYSTAADFNQANPPMILIGFGVAGGGIPGATIQYSGLTIIPGV LQNIGQVPQRHFDFYPFLGFANTTTDLSKLPGTYNALVYHTVPSGNYAAKAIASNETFDANGACTSTSASGCMTTGNPWT ASGNGYFNSTQAPQILPQTQLPLIGATGKSAVAHMVLGQLNGATVPVVVRTGNVNLGTPPLHTDAQVDDESGIAVLGLVQ AIASGGIDGGYAGADSNFKYTATVIKGTTGTFVNPSTQQAETGFTLDYGQSTPGLLGVTTTDTSAPGFVIASGGLYAALV QGTVNGGITQSSAIAGQTPSAPYFGVGAQVSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43245; Mature: 43113
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQCSGSSCGVQGPPSSTAANTSLCPADANIGSSTYLGGAGGGEIVSLNINATTMTYTLK CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCCCCEEEEEEECEEEEEEEEE WLESPVPLATGTVTPTRAGTTITGSVAHPPAGTLPTAEQTRCAFVLLPGSGTAPATNSTY ECCCCCCEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC STAADFNQANPPMILIGFGVAGGGIPGATIQYSGLTIIPGVLQNIGQVPQRHFDFYPFLG CCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCEEECHHHHHHHHHHHHHHCCCCEEEC FANTTTDLSKLPGTYNALVYHTVPSGNYAAKAIASNETFDANGACTSTSASGCMTTGNPW CCCCCCHHHHCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEECCCCE TASGNGYFNSTQAPQILPQTQLPLIGATGKSAVAHMVLGQLNGATVPVVVRTGNVNLGTP ECCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCC PLHTDAQVDDESGIAVLGLVQAIASGGIDGGYAGADSNFKYTATVIKGTTGTFVNPSTQQ CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCEECCCCCC AETGFTLDYGQSTPGLLGVTTTDTSAPGFVIASGGLYAALVQGTVNGGITQSSAIAGQTP CCCCEEEECCCCCCCEEEEEECCCCCCCEEEECCCEEEEEEEECCCCCCCCCCCCCCCCC SAPYFGVGAQVSK CCCEEECCCCCCC >Mature Secondary Structure PQCSGSSCGVQGPPSSTAANTSLCPADANIGSSTYLGGAGGGEIVSLNINATTMTYTLK CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCCCCEEEEEEECEEEEEEEEE WLESPVPLATGTVTPTRAGTTITGSVAHPPAGTLPTAEQTRCAFVLLPGSGTAPATNSTY ECCCCCCEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC STAADFNQANPPMILIGFGVAGGGIPGATIQYSGLTIIPGVLQNIGQVPQRHFDFYPFLG CCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCEEECHHHHHHHHHHHHHHCCCCEEEC FANTTTDLSKLPGTYNALVYHTVPSGNYAAKAIASNETFDANGACTSTSASGCMTTGNPW CCCCCCHHHHCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEECCCCE TASGNGYFNSTQAPQILPQTQLPLIGATGKSAVAHMVLGQLNGATVPVVVRTGNVNLGTP ECCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCC PLHTDAQVDDESGIAVLGLVQAIASGGIDGGYAGADSNFKYTATVIKGTTGTFVNPSTQQ CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCEECCCCCC AETGFTLDYGQSTPGLLGVTTTDTSAPGFVIASGGLYAALVQGTVNGGITQSSAIAGQTP CCCCEEEECCCCCCCEEEEEECCCCCCCEEEECCCEEEEEEEECCCCCCCCCCCCCCCCC SAPYFGVGAQVSK CCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA