| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is wrbA [H]
Identifier: 237814186
GI number: 237814186
Start: 3820667
End: 3821242
Strand: Direct
Name: wrbA [H]
Synonym: GBP346_A3980
Alternate gene names: 237814186
Gene position: 3820667-3821242 (Clockwise)
Preceding gene: 237814184
Following gene: 237814187
Centisome position: 93.22
GC content: 68.58
Gene sequence:
>576_bases ATGTCGAACCTCGTCATCGTTTACCACAGCGGCTACGGCCACACGAAGAAACTCGCCGAATCGGTGCTCGCGGGCGCGCG GGAAGCCGGGGCGAACGCGCGGCTCGTCGCCGTCGGCGATCTCGACGACGCCGGCTGGGCCGCCCTCGATGCCGCCGACG CGATTGTCTTCGGCGCGCCGACTTACATGGGCGGGCCATCGGCCGACTTCAAGAAATTCGCCGACGCGACGTCGAAAGCG TGGTTCGGCCAGAAATGGAAGGACAAGATCGCGGCGGGCTTCACGAACTCCGCCTCGATGAACGGCGACAAGTTCTCGAC GATTCAATATTTCGTCACGCTCGCGATGCAGCATGGGATGGTATGGGTCGGCACGGGCCTGCTGCCCGCGAACACGAAGG CGGCGACGCGCGACGACCTCAACTACGCGGGCGGCTTCACGGGGCTGCTCGCGCAATCGCCGTCCGACGCGTCGCCGGAC GAGGCGCCCGCCGGCGGCGATCTCGGCACCGCGAAGGCGTTCGGCGCGCGCGTCGCGACGGCCACCGCCCGCTGGCTCGC CGGCAACGGCCGATGA
Upstream 100 bases:
>100_bases TTCCGCCAGCCGTTCGCGCACCCAGCCGCGCACGGACATCGTTCGCCGCGCGGGCCGCCGGGCGCGTGCGGTTTCGTCGT CTCACCTTGGAGAAAAGGGC
Downstream 100 bases:
>100_bases GGGGGCCGTGCGGTCCGGCAAAGGGCCGGACCGCAAGCGCGGCGCCGCGGGGTTTTTTCGGCCGAACCGGTTACGGCGCC GCGCATCACGTCTTAAAATA
Product: putative flavodoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MSNLVIVYHSGYGHTKKLAESVLAGAREAGANARLVAVGDLDDAGWAALDAADAIVFGAPTYMGGPSADFKKFADATSKA WFGQKWKDKIAAGFTNSASMNGDKFSTIQYFVTLAMQHGMVWVGTGLLPANTKAATRDDLNYAGGFTGLLAQSPSDASPD EAPAGGDLGTAKAFGARVATATARWLAGNGR
Sequences:
>Translated_191_residues MSNLVIVYHSGYGHTKKLAESVLAGAREAGANARLVAVGDLDDAGWAALDAADAIVFGAPTYMGGPSADFKKFADATSKA WFGQKWKDKIAAGFTNSASMNGDKFSTIQYFVTLAMQHGMVWVGTGLLPANTKAATRDDLNYAGGFTGLLAQSPSDASPD EAPAGGDLGTAKAFGARVATATARWLAGNGR >Mature_190_residues SNLVIVYHSGYGHTKKLAESVLAGAREAGANARLVAVGDLDDAGWAALDAADAIVFGAPTYMGGPSADFKKFADATSKAW FGQKWKDKIAAGFTNSASMNGDKFSTIQYFVTLAMQHGMVWVGTGLLPANTKAATRDDLNYAGGFTGLLAQSPSDASPDE APAGGDLGTAKAFGARVATATARWLAGNGR
Specific function: Seems To Enhance The Formation And/Or Stability Of Noncovalent Complexes Between The Trp Repressor Protein And Operator-Bearing DNA. However, Wrba Does Not Specifically Influence The Affinity Or Mode Of Binding Of Trpr To Its Operator. It Seems Possible T
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR010089 - InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 19696; Mature: 19565
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLVIVYHSGYGHTKKLAESVLAGAREAGANARLVAVGDLDDAGWAALDAADAIVFGAP CCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEHHHHCCEEEECCC TYMGGPSADFKKFADATSKAWFGQKWKDKIAAGFTNSASMNGDKFSTIQYFVTLAMQHGM CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCE VWVGTGLLPANTKAATRDDLNYAGGFTGLLAQSPSDASPDEAPAGGDLGTAKAFGARVAT EEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH ATARWLAGNGR HHHHHHCCCCC >Mature Secondary Structure SNLVIVYHSGYGHTKKLAESVLAGAREAGANARLVAVGDLDDAGWAALDAADAIVFGAP CCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEHHHHCCEEEECCC TYMGGPSADFKKFADATSKAWFGQKWKDKIAAGFTNSASMNGDKFSTIQYFVTLAMQHGM CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCE VWVGTGLLPANTKAATRDDLNYAGGFTGLLAQSPSDASPDEAPAGGDLGTAKAFGARVAT EEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH ATARWLAGNGR HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA