| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814108
Identifier: 237814108
GI number: 237814108
Start: 3746454
End: 3746597
Strand: Reverse
Name: 237814108
Synonym: GBP346_A3894
Alternate gene names: NA
Gene position: 3746597-3746454 (Counterclockwise)
Preceding gene: 237814109
Following gene: 237814105
Centisome position: 91.41
GC content: 63.19
Gene sequence:
>144_bases TTGCACGATGTGGTTACGGCTGCGGCTGCGGCGCGGGTTGGCCCGGCCGCGTTGGCCGCCTGTACGGCATGTGCCGCCTA TGTCGCGTCGAGCGACGCGCAAACGAAAAGGCGATGTCCACTTGTTGGACATCGCCTTTTTTGA
Upstream 100 bases:
>100_bases GCTGGCGCGTGCTCGTGTGGGCGCGGCAACGCTGGGGCGCAGCGGCGGCGGGCGGACGCGCGTCGTAGCGCGAGGGGCGG GCGCGCTCGGGGCGCGCGCG
Downstream 100 bases:
>100_bases TCGGGCCCGCCGGTTTGTCGAATGATCGAATTGCCGGCGGCTGCCGATGCGTCGTGCGAGCGCCGCGTGCCGGCGCTTAC CGGCCTTCGGGCAGGATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 47; Mature: 47
Protein sequence:
>47_residues MHDVVTAAAAARVGPAALAACTACAAYVASSDAQTKRRCPLVGHRLF
Sequences:
>Translated_47_residues MHDVVTAAAAARVGPAALAACTACAAYVASSDAQTKRRCPLVGHRLF >Mature_47_residues MHDVVTAAAAARVGPAALAACTACAAYVASSDAQTKRRCPLVGHRLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4771; Mature: 4771
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 6.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDVVTAAAAARVGPAALAACTACAAYVASSDAQTKRRCPLVGHRLF CCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCC >Mature Secondary Structure MHDVVTAAAAARVGPAALAACTACAAYVASSDAQTKRRCPLVGHRLF CCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA