| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814101
Identifier: 237814101
GI number: 237814101
Start: 3739118
End: 3740077
Strand: Reverse
Name: 237814101
Synonym: GBP346_A3887
Alternate gene names: NA
Gene position: 3740077-3739118 (Counterclockwise)
Preceding gene: 237814102
Following gene: 237814100
Centisome position: 91.25
GC content: 74.9
Gene sequence:
>960_bases GTGAGCGGAGCGGTCGAACGTGCAGCAGGGCGGCGCGCATGGGCGAGATGGGCCGATTCGCGCCGCATGTCGGGCGCCGG CTGGCGAATGGCGATGCGCGCGGCGTTCGCGTGCGGCGTGTTCGTCTGCGGCGTATACGCGGGCCGCGACGCCGATTGGG GCGGCGTCGAGCGCGGCAGGGCGGTGCTCGAATCGGTCGCGGCGCGCGAGGCGCGCGCGCGGCGGCTCCTCGCCGCGGCG TCCGGCCGGTCGGCGCCGTCGGCGGGCGCCGAACGCTCGCCGGCTCAGCCGCAAACCCCTTCCGATTGGGCGATGCGCCT GGCCGGCCACGCGGGCGCGAGCGGGCTGCGGGTGCGCAAGCTCGAGCGGCTCGGCGGCGAACGCGCGGGCGAGCGGGGCG ACGTTGGGGCCGATGAGAGGGCGACCAGGGCGACTAAGACGACGAATAAGGCGGCGCATGGGAGCGGCAATCAGGCAGCC AACGAGGCGGCCGACTACGTGTTCGCCATTAGCGCGGAAGGCGATTTCGATGCGCTGTACCGCTTCCTCTCCGGGCTCGC CGCGCTGCCTGCGCTCGTGGTGCCGGTGACCTCGAATGTGAAGCGCGACGACGGCGCGACCCTGCTGGAGGCCCGGCTCG ACGTCTGGCCCGCGTTGCCCGGGGCCGAAGCGGACGGGCCGCCGCCCGCCGACGCGCGTGCGGTTCCCGTCGCCGATCCC TTCTCCGCGATGCCGATGCAGGCAATCGACGATGCGGCCGGCGCCGCACGGCTCGTCGGCGTGATTCGCGACCGGCTCAG CGGGCTCGCGCTGTTCGAGCGCGGCAGCGATGCGTGGTCGGTCGCGCCGGGGCAGACGGTGGACGGTGCGCGTGTCGCGC GAATCCGGGCGGCAGGTGTGACGCTCGCGACGCACGGCGGCGGCCGGCGCGTGATGACCGTCGGGGAAGCGACGGGATGA
Upstream 100 bases:
>100_bases GATCGCTGTCGTTCTCGGTGCGGATTCGTTGGCCCGCGGGCGCTCGGGGGCGCGGCGCGAGCATGGTGGCGCATGCGGCG GCGGCTGCACGGGAGGGGGC
Downstream 100 bases:
>100_bases GGCGCGGGCTCGTTCGATTCTTGCTGGGATGCGCGCTCGGAGCGGCGGGCGAGGCAGTTGCATCGTTGCCGCCGCTGCCC GTCGGCGCCCCGTCCGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MSGAVERAAGRRAWARWADSRRMSGAGWRMAMRAAFACGVFVCGVYAGRDADWGGVERGRAVLESVAAREARARRLLAAA SGRSAPSAGAERSPAQPQTPSDWAMRLAGHAGASGLRVRKLERLGGERAGERGDVGADERATRATKTTNKAAHGSGNQAA NEAADYVFAISAEGDFDALYRFLSGLAALPALVVPVTSNVKRDDGATLLEARLDVWPALPGAEADGPPPADARAVPVADP FSAMPMQAIDDAAGAARLVGVIRDRLSGLALFERGSDAWSVAPGQTVDGARVARIRAAGVTLATHGGGRRVMTVGEATG
Sequences:
>Translated_319_residues MSGAVERAAGRRAWARWADSRRMSGAGWRMAMRAAFACGVFVCGVYAGRDADWGGVERGRAVLESVAAREARARRLLAAA SGRSAPSAGAERSPAQPQTPSDWAMRLAGHAGASGLRVRKLERLGGERAGERGDVGADERATRATKTTNKAAHGSGNQAA NEAADYVFAISAEGDFDALYRFLSGLAALPALVVPVTSNVKRDDGATLLEARLDVWPALPGAEADGPPPADARAVPVADP FSAMPMQAIDDAAGAARLVGVIRDRLSGLALFERGSDAWSVAPGQTVDGARVARIRAAGVTLATHGGGRRVMTVGEATG >Mature_318_residues SGAVERAAGRRAWARWADSRRMSGAGWRMAMRAAFACGVFVCGVYAGRDADWGGVERGRAVLESVAAREARARRLLAAAS GRSAPSAGAERSPAQPQTPSDWAMRLAGHAGASGLRVRKLERLGGERAGERGDVGADERATRATKTTNKAAHGSGNQAAN EAADYVFAISAEGDFDALYRFLSGLAALPALVVPVTSNVKRDDGATLLEARLDVWPALPGAEADGPPPADARAVPVADPF SAMPMQAIDDAAGAARLVGVIRDRLSGLALFERGSDAWSVAPGQTVDGARVARIRAAGVTLATHGGGRRVMTVGEATG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32966; Mature: 32835
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGAVERAAGRRAWARWADSRRMSGAGWRMAMRAAFACGVFVCGVYAGRDADWGGVERGR CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH AVLESVAAREARARRLLAAASGRSAPSAGAERSPAQPQTPSDWAMRLAGHAGASGLRVRK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHH LERLGGERAGERGDVGADERATRATKTTNKAAHGSGNQAANEAADYVFAISAEGDFDALY HHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCEEEEEECCCCHHHHH RFLSGLAALPALVVPVTSNVKRDDGATLLEARLDVWPALPGAEADGPPPADARAVPVADP HHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC FSAMPMQAIDDAAGAARLVGVIRDRLSGLALFERGSDAWSVAPGQTVDGARVARIRAAGV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEECCCCCCCCCHHHHEEEECCE TLATHGGGRRVMTVGEATG EEEECCCCCEEEEECCCCC >Mature Secondary Structure SGAVERAAGRRAWARWADSRRMSGAGWRMAMRAAFACGVFVCGVYAGRDADWGGVERGR CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH AVLESVAAREARARRLLAAASGRSAPSAGAERSPAQPQTPSDWAMRLAGHAGASGLRVRK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHH LERLGGERAGERGDVGADERATRATKTTNKAAHGSGNQAANEAADYVFAISAEGDFDALY HHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCEEEEEECCCCHHHHH RFLSGLAALPALVVPVTSNVKRDDGATLLEARLDVWPALPGAEADGPPPADARAVPVADP HHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC FSAMPMQAIDDAAGAARLVGVIRDRLSGLALFERGSDAWSVAPGQTVDGARVARIRAAGV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEECCCCCCCCCHHHHEEEECCE TLATHGGGRRVMTVGEATG EEEECCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA